Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_004945 Vanilla planifolia HOM05D000215 ORTHO05D004644 3.9e-27 124.0 61 100.0
Cpa.g.sc26.188 Carica papaya HOM05D000215 ORTHO05D004644 4.6e-12 73.9 55 65.5
CSS0007831 Camellia sinensis var. sinensis HOM05D000215 ORTHO05D004644 2.3e-11 71.6 55 63.6
CSS0041681 Camellia sinensis var. sinensis HOM05D000215 ORTHO05D004644 2.3e-11 71.6 55 63.6
Cfa005348 Carpinus fangiana HOM05D000215 ORTHO05D004644 2.3e-11 71.6 55 63.6
CiPaw.05G091500 Carya illinoinensis HOM05D000215 ORTHO05D004644 2.3e-11 71.6 55 61.8
Haze_02018 Corylus avellana HOM05D000215 ORTHO05D004644 2.3e-11 71.6 55 63.6
Dinv31950 Davidia involucrata HOM05D000215 ORTHO05D004644 2.3e-11 71.6 53 64.2
Manes.04G067400 Manihot esculenta HOM05D000215 ORTHO05D004644 2.3e-11 71.6 55 63.6
Gohir.A03G209400 Gossypium hirsutum HOM05D000215 ORTHO05D004644 3.0e-11 71.2 55 61.8
Gohir.D02G231100 Gossypium hirsutum HOM05D000215 ORTHO05D004644 3.0e-11 71.2 55 61.8
Gorai.005G258700 Gossypium raimondii HOM05D000215 ORTHO05D004644 3.0e-11 71.2 55 61.8
PSO541G2085 Papaver somniferum HOM05D000215 ORTHO05D004644 3.0e-11 71.2 55 61.8
PSO675G8462 Papaver somniferum HOM05D000215 ORTHO05D004644 3.0e-11 71.2 55 61.8
TWI36G0607 Tripterygium wilfordii HOM05D000215 ORTHO05D004644 3.0e-11 71.2 55 63.6
Oeu035842.1 Olea europaea HOM05D000215 ORTHO05D003639 3.9e-11 70.9 55 63.6
ATR0661G141 Amborella trichopoda HOM05D000215 ORTHO05D004644 5.1e-11 70.5 53 62.3
Sabra02G0007300 Salix brachista HOM05D000215 ORTHO05D004644 5.1e-11 70.5 55 63.6
Ciclev10003715m.g Citrus clementina HOM05D000215 ORTHO05D004644 6.7e-11 70.1 53 62.3
SalBow1G2780 Salvia bowleyana HOM05D000215 ORTHO05D004644 6.7e-11 70.1 55 58.2
COL.COLO4_17935 Corchorus olitorius HOM05D000215 ORTHO05D004644 8.8e-11 69.7 55 63.6
Duzib132G0739 Durio zibethinus HOM05D000215 ORTHO05D004644 8.8e-11 69.7 55 61.8
Potri.002G009900 Populus trichocarpa HOM05D000215 ORTHO05D004644 8.8e-11 69.7 55 63.6
Aqoxy5G01033 Aquilegia oxysepala HOM05D000215 ORTHO05D004644 1.1e-10 69.3 55 61.8
Aqoxy6G01694 Aquilegia oxysepala HOM05D000215 ORTHO05D004644 1.1e-10 69.3 55 61.8
Aa31LG9G12470 Aethionema arabicum HOM05D000215 ORTHO05D004644 1.5e-10 68.9 55 58.2
CDE06G2519 Ceratophyllum demersum HOM05D000215 ORTHO05D004644 1.5e-10 68.9 55 61.8
Migut.N02959 Erythranthe guttata HOM05D000215 ORTHO05D004644 1.5e-10 68.9 54 63.0
Nn5g30960 Nelumbo nucifera HOM05D000215 ORTHO05D004644 1.5e-10 68.9 55 61.8
SGA_v2.0_scaffold364G49976 Striga asiatica HOM05D000215 ORTHO05D004644 1.5e-10 68.9 54 63.0
GSVIVG01023893001 Vitis vinifera HOM05D000215 ORTHO05D004644 1.5e-10 68.9 53 62.3
CANSAT25G0538 Cannabis sativa HOM05D000215 ORTHO05D004644 2.0e-10 68.6 55 60.0
Nitab4.5_0011742g0010 Nicotiana tabacum HOM05D000215 ORTHO05D004644 2.0e-10 68.6 55 60.0
TAR628G1514 Trochodendron aralioides HOM05D000215 ORTHO05D004644 2.0e-10 68.6 53 64.2
vmacro04408 Vaccinium macrocarpon HOM05D000215 ORTHO05D004644 2.6e-10 68.2 55 60.0
CSS0033364 Camellia sinensis var. sinensis HOM05D000215 ORTHO05D004644 3.3e-10 67.8 55 58.2
CDE07G1262 Ceratophyllum demersum HOM05D000215 ORTHO05D004644 3.3e-10 67.8 55 60.0
Ciclev10028003m.g Citrus clementina HOM05D000215 ORTHO05D004644 3.3e-10 67.8 55 60.0
Duzib052G0654 Durio zibethinus HOM05D000215 ORTHO05D004644 3.3e-10 67.8 55 60.0
Duzib093G0893 Durio zibethinus HOM05D000215 ORTHO05D004644 3.3e-10 67.8 55 61.8
TWI79G0934 Tripterygium wilfordii HOM05D000215 ORTHO05D004644 3.3e-10 67.8 55 60.0
Peaxi162Scf00711g00412 Petunia axillaris HOM05D000215 ORTHO05D004644 4.4e-10 67.4 55 56.4
Haze_22789 Corylus avellana HOM05D000215 ORTHO05D004644 5.7e-10 67.0 55 56.4
Atru.chr5.3553 Acer truncatum HOM05D000215 ORTHO05D004644 7.4e-10 66.6 55 61.8
Lj9A405T69 Lonicera japonica HOM05D000215 ORTHO05D004644 7.4e-10 66.6 55 60.0
RcHm_v2.0_Chr6g0304371 Rosa chinensis HOM05D000215 ORTHO05D004644 7.4e-10 66.6 55 60.0
MBI08_g42875_MAGBIO Magnolia biondii HOM05D000215 ORTHO05D004644 9.7e-10 66.2 55 58.2
MD05G1134200 Malus domestica HOM05D000215 ORTHO05D004644 9.7e-10 66.2 55 58.2
Solyc04g082440.4 Solanum lycopersicum HOM05D000215 ORTHO05D004644 9.7e-10 66.2 55 54.5
Sopen04g036030 Solanum pennellii HOM05D000215 ORTHO05D004644 9.7e-10 66.2 55 54.5
PGSC0003DMG400009904 Solanum tuberosum HOM05D000215 ORTHO05D004644 9.7e-10 66.2 55 54.5
CARHR284970 Cardamine hirsuta HOM05D000215 ORTHO05D004644 1.3e-09 65.9 55 56.4
Thhalv10003163m.g Eutrema salsugineum HOM05D000215 ORTHO05D004644 1.3e-09 65.9 55 58.2
Gohir.D01G165800 Gossypium hirsutum HOM05D000215 ORTHO05D004644 1.3e-09 65.9 55 58.2
Gorai.002G206200 Gossypium raimondii HOM05D000215 ORTHO05D004644 1.3e-09 65.9 55 58.2
Thecc.08G060000 Theobroma cacao HOM05D000215 ORTHO05D004644 1.3e-09 65.9 55 54.5
Actinidia28604 Actinidia chinensis HOM05D000215 ORTHO05D004644 1.7e-09 65.5 55 56.4
EL10Ac1g01947 Beta vulgaris HOM05D000215 ORTHO05D004644 1.7e-09 65.5 52 59.6
CANSAT25G0412 Cannabis sativa HOM05D000215 ORTHO05D004644 1.7e-09 65.5 55 56.4
Cfa014088 Carpinus fangiana HOM05D000215 ORTHO05D004644 1.7e-09 65.5 55 56.4
FAN27G0882 Fragaria x ananassa HOM05D000215 ORTHO05D004644 1.7e-09 65.5 55 60.0
Lj4A10G78 Lonicera japonica HOM05D000215 ORTHO05D004644 1.7e-09 65.5 54 59.3
Lalb_Chr03g0038221 Lupinus albus HOM05D000215 ORTHO05D004644 1.7e-09 65.5 55 54.5
Rhsim07G0255400 Rhododendron simsii HOM05D000215 ORTHO05D004644 1.7e-09 65.5 55 56.4
Eucgr.I01515 Eucalyptus grandis HOM05D000215 ORTHO05D004644 2.2e-09 65.1 55 56.4
Sp7g08220 Schrenkiella parvula HOM05D000215 ORTHO05D004644 2.2e-09 65.1 55 58.2
Sc02g0009130 Simmondsia chinensis HOM05D000215 ORTHO05D004644 2.2e-09 65.1 55 58.2
Glyma.09G256200 Glycine max HOM05D000215 ORTHO05D004644 2.8e-09 64.7 55 56.4
Gohir.A01G105200 Gossypium hirsutum HOM05D000215 ORTHO05D004644 2.8e-09 64.7 55 56.4
Gohir.A01G174600 Gossypium hirsutum HOM05D000215 ORTHO05D004644 2.8e-09 64.7 55 58.2
Gohir.D01G091500 Gossypium hirsutum HOM05D000215 ORTHO05D004644 2.8e-09 64.7 55 56.4
Gorai.002G116600 Gossypium raimondii HOM05D000215 ORTHO05D004644 2.8e-09 64.7 55 56.4
MBI08_g12722_MAGBIO Magnolia biondii HOM05D000215 ORTHO05D004644 2.8e-09 64.7 55 56.4
Manes.18G004600 Manihot esculenta HOM05D000215 ORTHO05D004644 2.8e-09 64.7 54 55.6
Prupe.1G353700 Prunus persica HOM05D000215 ORTHO05D004644 2.8e-09 64.7 55 58.2
THA.LOC104825427 Tarenaya hassleriana HOM05D000215 ORTHO05D004644 2.8e-09 64.7 55 61.8
CAN.G311.121 Capsicum annuum HOM05D000215 ORTHO05D004644 3.7e-09 64.3 55 52.7
Sed0008065 Sechium edule HOM05D000215 ORTHO05D004644 3.7e-09 64.3 55 61.8
Medtr7g078330 Medicago truncatula HOM05D000215 ORTHO05D004644 4.8e-09 63.9 55 56.4
TPR.G37838 Trifolium pratense HOM05D000215 ORTHO05D004644 4.8e-09 63.9 55 56.4
unitig_744.g24088 Utricularia gibba HOM05D001427 ORTHO05D001320 4.8e-09 63.9 54 57.4
MELO3C013502.2 Cucumis melo HOM05D000215 ORTHO05D004644 6.3e-09 63.5 55 58.2
Lj1g0015902 Lotus japonicus HOM05D000215 ORTHO05D004644 6.3e-09 63.5 55 56.4
Oeu062474.1 Olea europaea HOM05D000215 ORTHO05D004644 6.3e-09 63.5 54 55.6
Potri.009G165900 Populus trichocarpa HOM05D000215 ORTHO05D004644 6.3e-09 63.5 55 56.4
QL11p055589 Quercus lobata HOM05D000215 ORTHO05D004644 6.3e-09 63.5 55 60.0
QL11p055892 Quercus lobata HOM05D000215 ORTHO05D004644 6.3e-09 63.5 55 60.0
GSVIVG01009896001 Vitis vinifera HOM05D000215 ORTHO05D004644 6.3e-09 63.5 55 50.9
Zm00001eb228550 Zea mays HOM05D000215 ORTHO05D004644 6.3e-09 63.5 55 50.9
BcaB07g31084 Brassica carinata HOM05D000215 ORTHO05D004644 8.2e-09 63.2 55 56.4
BcaNung05252 Brassica carinata HOM05D000215 ORTHO05D004644 8.2e-09 63.2 55 56.4
CsaV3_6G010170 Cucumis sativus L. HOM05D000215 ORTHO05D004644 8.2e-09 63.2 55 58.2
MD15G1001100 Malus domestica HOM05D000215 ORTHO05D004644 8.2e-09 63.2 55 56.4
SalBow6G0724 Salvia bowleyana HOM05D000215 ORTHO05D004644 8.2e-09 63.2 54 55.6
AL8G19250 Arabidopsis lyrata HOM05D000215 ORTHO05D004644 1.1e-08 62.8 55 54.5
Carub.0008s0684 Capsella rubella HOM05D000215 ORTHO05D004644 1.1e-08 62.8 55 54.5
AUR62036856 Chenopodium quinoa HOM05D000215 ORTHO05D004644 1.1e-08 62.8 52 53.8
Duzib116G0860 Durio zibethinus HOM05D000215 ORTHO05D004644 1.1e-08 62.8 55 56.4
FvH4_2g16600 Fragaria vesca HOM05D000215 ORTHO05D004644 1.1e-08 62.8 53 60.4
FAN24G0480 Fragaria x ananassa HOM05D000215 ORTHO05D004644 1.1e-08 62.8 53 60.4
A09p19600 Brassica napus HOM05D000215 ORTHO05D004644 1.4e-08 62.4 55 56.4
BraA09t37571Z Brassica rapa HOM05D000215 ORTHO05D004644 1.4e-08 62.4 55 56.4
AUR62040800 Chenopodium quinoa HOM05D000215 ORTHO05D004644 1.4e-08 62.4 52 53.8
ClCG02G009880 Citrullus lanatus HOM05D000215 ORTHO05D004644 1.4e-08 62.4 55 58.2
Potri.004G205000 Populus trichocarpa HOM05D000215 ORTHO05D004644 1.4e-08 62.4 55 58.2
PGR083G2494 Punica granatum HOM05D000215 ORTHO05D004644 1.4e-08 62.4 53 56.6
Sabra04G0138300 Salix brachista HOM05D000215 ORTHO05D004644 1.4e-08 62.4 55 56.4
PGSC0003DMG400029409 Solanum tuberosum HOM05D000215 ORTHO05D004644 1.4e-08 62.4 54 55.6
FvH4_2g37350 Fragaria vesca HOM05D000215 ORTHO05D004644 1.8e-08 62.0 55 58.2
FAN15G3706 Fragaria x ananassa HOM05D000215 ORTHO05D004644 1.8e-08 62.0 55 58.2
AT5G42340 Arabidopsis thaliana HOM05D000215 ORTHO05D004644 2.4e-08 61.6 55 54.5
BcaC04g22002 Brassica carinata HOM05D000215 ORTHO05D004644 2.4e-08 61.6 55 56.4
C09p24960 Brassica napus HOM05D000215 ORTHO05D004644 2.4e-08 61.6 55 56.4
BolC9t55386H Brassica oleracea HOM05D000215 ORTHO05D004644 2.4e-08 61.6 55 56.4
Phvul.008G059800 Phaseolus vulgaris HOM05D000215 ORTHO05D004644 2.4e-08 61.6 55 54.5
Migut.B00015 Erythranthe guttata HOM05D000215 ORTHO05D004644 3.1e-08 61.2 55 54.5
Eucgr.F01774 Eucalyptus grandis HOM05D000215 ORTHO05D004644 3.1e-08 61.2 53 52.8
Eucgr.G00150 Eucalyptus grandis HOM05D000215 ORTHO05D004644 3.1e-08 61.2 55 50.9
Lsat_1_v5_gn_2_3881 Lactuca sativa HOM05D000215 ORTHO05D004644 3.1e-08 61.2 56 51.8
Psat3g107000 Pisum sativum HOM05D000215 ORTHO05D004644 3.1e-08 61.2 55 54.5
RcHm_v2.0_Chr6g0280661 Rosa chinensis HOM05D000215 ORTHO05D004644 3.1e-08 61.2 55 56.4
VMungo1383G2570 Vigna mungo HOM05D000215 ORTHO05D004644 3.1e-08 61.2 55 56.4
CiPaw.07G138100 Carya illinoinensis HOM05D000215 ORTHO05D004644 4.1e-08 60.8 53 49.1
ECA238G2012 Erigeron canadensis HOM05D000215 ORTHO05D004644 4.1e-08 60.8 54 50.0
FAN15G1207 Fragaria x ananassa HOM05D000215 ORTHO05D004644 4.1e-08 60.8 55 56.4
FAN20G2249 Fragaria x ananassa HOM05D000215 ORTHO05D004644 5.3e-08 60.5 55 56.4
Glyma.18G236600 Glycine max HOM05D000215 ORTHO05D004644 5.3e-08 60.5 55 56.4
Gohir.A02G084900 Gossypium hirsutum HOM05D000215 ORTHO05D004644 5.3e-08 60.5 55 49.1
Gohir.D02G100600 Gossypium hirsutum HOM05D000215 ORTHO05D004644 5.3e-08 60.5 55 49.1
Gorai.005G114100 Gossypium raimondii HOM05D000215 ORTHO05D004644 5.3e-08 60.5 55 49.1
Prupe.8G178000 Prunus persica HOM05D000215 ORTHO05D004644 5.3e-08 60.5 55 52.7
arahy.Tifrunner.gnm1.ann1.BK0XDS Arachis hypogaea HOM05D000215 ORTHO05D004644 6.9e-08 60.1 55 52.7
arahy.Tifrunner.gnm1.ann1.D83LV0 Arachis hypogaea HOM05D000215 ORTHO05D004644 6.9e-08 60.1 55 52.7
Ca_00824_v3 Cicer arietinum L. HOM05D000215 ORTHO05D004644 6.9e-08 60.1 55 54.5
MSTRG.16954 Avicennia marina HOM05D000215 ORTHO05D004644 9.1e-08 59.7 55 49.1
MD08G1002000 Malus domestica HOM05D000215 ORTHO05D004644 9.1e-08 59.7 55 54.5
Os08g0481200 Oryza sativa ssp. japonica HOM05D000215 ORTHO05D004644 1.2e-07 59.3 53 52.8
ECA233G0255 Erigeron canadensis HOM05D000215 ORTHO05D004644 2.0e-07 58.5 59 55.9
QL02p014382 Quercus lobata HOM05D000215 ORTHO05D004644 2.0e-07 58.5 55 50.9
Cpa.g.sc20.202 Carica papaya HOM05D000215 ORTHO05D004644 2.6e-07 58.2 53 54.7
Manes.05G133400 Manihot esculenta HOM05D000215 ORTHO05D004644 2.6e-07 58.2 55 50.9
Sed0001098 Sechium edule HOM05D000215 ORTHO05D004644 2.6e-07 58.2 55 54.5
Sopen12g031510 Solanum pennellii HOM05D000215 ORTHO05D004644 2.6e-07 58.2 54 51.9
Potri.001G238500 Populus trichocarpa HOM05D000215 ORTHO05D001676 3.4e-07 57.8 54 50.0
Cc10_g00610 Coffea canephora HOM05D000215 ORTHO05D004644 4.5e-07 57.4 53 49.1
HanXRQChr14g0427431 Helianthus annuus HOM05D000215 ORTHO05D004644 4.5e-07 57.4 54 48.1
Dinv05527 Davidia involucrata HOM05D000215 ORTHO05D004644 5.9e-07 57.0 61 52.5
ClCG03G001600 Citrullus lanatus HOM05D000215 ORTHO05D001676 1.0e-06 56.2 54 51.9
TWI31G0784 Tripterygium wilfordii HOM05D000215 ORTHO05D001676 1.3e-06 55.8 54 50.0
TAR623G0207 Trochodendron aralioides HOM05D000215 ORTHO05D001676 1.3e-06 55.8 54 50.0
Zm00001eb033520 Zea mays HOM05D000215 ORTHO05D004644 1.3e-06 55.8 53 50.9
CAN.G208.22 Capsicum annuum HOM05D000215 ORTHO05D004644 1.7e-06 55.5 54 50.0
Lsat_1_v5_gn_8_119901 Lactuca sativa HOM05D000215 ORTHO05D004644 1.7e-06 55.5 55 52.7
Hund18919 Selenicereus undatus HOM05D000215 ORTHO05D001676 1.7e-06 55.5 54 50.0
Cfa011487 Carpinus fangiana HOM05D000215 ORTHO05D001676 2.2e-06 55.1 54 50.0
CiPaw.13G095700 Carya illinoinensis HOM05D000215 ORTHO05D001676 2.2e-06 55.1 54 48.1
Potri.009G029600 Populus trichocarpa HOM05D000215 ORTHO05D001676 2.2e-06 55.1 54 48.1
QL01p032396 Quercus lobata HOM05D000215 ORTHO05D001676 2.2e-06 55.1 54 48.1
Nitab4.5_0007461g0010 Nicotiana tabacum HOM05D000215 ORTHO05D001676 2.9e-06 54.7 54 50.0
AagrBONN_evm.TU.Sc2ySwM_344.2545 Anthoceros agrestis HOM05D000215 ORTHO05D001676 3.8e-06 54.3 52 51.9
HanXRQChr12g0374411 Helianthus annuus HOM05D000215 ORTHO05D004644 3.8e-06 54.3 56 53.6
Sed0016957 Sechium edule HOM05D000215 ORTHO05D001676 3.8e-06 54.3 54 50.0
TWI75G0231 Tripterygium wilfordii HOM05D000215 ORTHO05D001676 3.8e-06 54.3 54 48.1
CANSAT54G2347 Cannabis sativa HOM05D000215 ORTHO05D001676 5.0e-06 53.9 60 46.7
CsaV3_1G034080 Cucumis sativus L. HOM05D000215 ORTHO05D001676 5.0e-06 53.9 55 47.3
Lalb_Chr11g0072901 Lupinus albus HOM05D000215 ORTHO05D004644 5.0e-06 53.9 55 47.3
Peaxi162Scf00679g00323 Petunia axillaris HOM05D000215 ORTHO05D001676 5.0e-06 53.9 54 48.1
Sabra09G0020600 Salix brachista HOM05D000215 ORTHO05D001676 5.0e-06 53.9 54 48.1
Sabra16G0143800 Salix brachista HOM05D000215 ORTHO05D001676 5.0e-06 53.9 54 48.1
Hund04977 Selenicereus undatus HOM05D000215 ORTHO05D001676 5.0e-06 53.9 54 48.1
COL.COLO4_18493 Corchorus olitorius HOM05D000215 ORTHO05D001676 6.5e-06 53.5 54 46.3
Eucgr.G00313 Eucalyptus grandis HOM05D000215 ORTHO05D004644 6.5e-06 53.5 55 45.5
Ah.00g000850 Amaranthus hybridus HOM05D000215 ORTHO05D004644 8.5e-06 53.1 52 55.8
Cc01_g12740 Coffea canephora HOM05D000215 ORTHO05D001676 8.5e-06 53.1 54 51.9
Haze_24079 Corylus avellana HOM05D000215 ORTHO05D001676 8.5e-06 53.1 54 46.3
Duzib170G0865 Durio zibethinus HOM05D000215 ORTHO05D001676 8.5e-06 53.1 54 46.3
MD03G1096300 Malus domestica HOM05D000215 ORTHO05D001676 8.5e-06 53.1 54 48.1
SalBow2G1098 Salvia bowleyana HOM05D000215 ORTHO05D001676 8.5e-06 53.1 54 50.0


User provided reference genes

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