Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_004876 Vanilla planifolia HOM05D006456 ORTHO05D007588 8.9e-112 407.1 235 100.0
HPP92_004850 Vanilla planifolia HOM05D006456 ORTHO05D007588 1.1e-109 400.2 235 98.3
Rhsim12G0086900 Rhododendron simsii HOM05D006456 ORTHO05D007588 1.2e-39 167.5 228 45.6
TAR629G3159 Trochodendron aralioides HOM05D006456 ORTHO05D007588 2.7e-39 166.4 232 44.4
Lsat_1_v5_gn_3_56960 Lactuca sativa HOM05D006456 ORTHO05D007588 2.2e-38 163.3 232 47.8
CiPaw.06G016000 Carya illinoinensis HOM05D006456 ORTHO05D007588 2.9e-38 162.9 230 44.3
GSVIVG01011822001 Vitis vinifera HOM05D006456 ORTHO05D007588 2.9e-38 162.9 232 41.8
MBI16_g14292_MAGBIO Magnolia biondii HOM05D006456 ORTHO05D007588 8.5e-38 161.4 231 52.4
CiPaw.05G243600 Carya illinoinensis HOM05D006456 ORTHO05D007588 1.9e-37 160.2 229 44.1
CANSAT01G2803 Cannabis sativa HOM05D006456 ORTHO05D007588 3.2e-37 159.5 232 43.1
Dinv31583 Davidia involucrata HOM05D006456 ORTHO05D007588 9.4e-37 157.9 228 48.2
Duzib248G0017 Durio zibethinus HOM05D006456 ORTHO05D007588 1.2e-36 157.5 234 41.0
CSS0027890 Camellia sinensis var. sinensis HOM05D006456 ORTHO05D007588 1.6e-36 157.1 229 43.7
vmacro01410 Vaccinium macrocarpon HOM05D006456 ORTHO05D007588 2.1e-36 156.8 228 44.7
Sopen03g020360 Solanum pennellii HOM05D006456 ORTHO05D007588 3.6e-36 156.0 241 41.9
Nitab4.5_0001999g0020 Nicotiana tabacum HOM05D006456 ORTHO05D007588 4.7e-36 155.6 243 42.4
Prupe.1G318000 Prunus persica HOM05D006456 ORTHO05D007588 4.7e-36 155.6 231 41.1
Nn4g23975 Nelumbo nucifera HOM05D006456 ORTHO05D007588 8.0e-36 154.8 233 41.6
Oeu014300.2 Olea europaea HOM05D006456 ORTHO05D007588 1.0e-35 154.5 228 39.9
Haze_00665 Corylus avellana HOM05D006456 ORTHO05D007588 1.8e-35 153.7 224 41.5
Manes.06G064100 Manihot esculenta HOM05D006456 ORTHO05D007588 4.0e-35 152.5 233 40.3
Thecc.02G220100 Theobroma cacao HOM05D006456 ORTHO05D007588 5.2e-35 152.1 231 40.7
Solyc03g013030.3 Solanum lycopersicum HOM05D006456 ORTHO05D007588 6.8e-35 151.8 241 39.8
MD16G1036000 Malus domestica HOM05D006456 ORTHO05D007588 2.0e-34 150.2 232 40.9
CAN.G99.9 Capsicum annuum HOM05D006456 ORTHO05D007588 4.4e-34 149.1 238 40.8
Cc11_g09550 Coffea canephora HOM05D006456 ORTHO05D007588 4.4e-34 149.1 237 46.8
Oeu027684.2 Olea europaea HOM05D006456 ORTHO05D007588 3.7e-33 146.0 228 39.0
QL01p003354 Quercus lobata HOM05D006456 ORTHO05D007588 3.7e-33 146.0 233 42.5
Aa31sc140G50 Aethionema arabicum HOM05D006456 ORTHO05D007588 4.8e-33 145.6 228 39.0
MD13G1034500 Malus domestica HOM05D006456 ORTHO05D007588 4.8e-33 145.6 228 39.5
unitig_52.g17127 Utricularia gibba HOM05D006456 ORTHO05D007588 4.8e-33 145.6 239 40.6
MSTRG.2210 Avicennia marina HOM05D006456 ORTHO05D007588 6.3e-33 145.2 230 38.7
HanXRQChr15g0477811 Helianthus annuus HOM05D006456 ORTHO05D007588 8.3e-33 144.8 227 41.0
PSO017G1436 Papaver somniferum HOM05D006456 ORTHO05D007588 8.3e-33 144.8 228 38.6
Hund25025 Selenicereus undatus HOM05D006456 ORTHO05D007588 8.3e-33 144.8 229 39.3
MELO3C012283.2 Cucumis melo HOM05D006456 ORTHO05D007588 2.4e-32 143.3 238 40.3
ECA246G1061 Erigeron canadensis HOM05D006456 ORTHO05D007588 3.1e-32 142.9 236 40.7
Gohir.D05G316500 Gossypium hirsutum HOM05D006456 ORTHO05D007588 3.1e-32 142.9 232 39.2
Gorai.009G338700 Gossypium raimondii HOM05D006456 ORTHO05D007588 3.1e-32 142.9 232 39.2
CDE07G1334 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 4.1e-32 142.5 234 39.3
FAN17G0635 Fragaria x ananassa HOM05D006456 ORTHO05D007588 4.1e-32 142.5 225 38.2
TWI75G0343 Tripterygium wilfordii HOM05D006456 ORTHO05D007588 5.4e-32 142.1 227 38.3
Glyma.10G269500 Glycine max HOM05D006456 ORTHO05D007588 9.1e-32 141.4 235 38.7
Ciclev10016584m.g Citrus clementina HOM05D006456 ORTHO05D007588 1.6e-31 140.6 230 44.8
ClCG05G022400 Citrullus lanatus HOM05D006456 ORTHO05D007588 2.0e-31 140.2 232 39.7
Gohir.A05G315000 Gossypium hirsutum HOM05D006456 ORTHO05D007588 2.0e-31 140.2 232 38.8
Glyma.20G121600 Glycine max HOM05D006456 ORTHO05D007588 2.7e-31 139.8 233 37.3
HanXRQChr17g0556631 Helianthus annuus HOM05D006456 ORTHO05D007588 3.5e-31 139.4 232 40.1
DCAR_007270 Daucus carota HOM05D006456 ORTHO05D007588 4.5e-31 139.0 232 38.8
PSO478G4574 Papaver somniferum HOM05D006456 ORTHO05D007588 4.5e-31 139.0 228 38.6
Lj5g0005162 Lotus japonicus HOM05D006456 ORTHO05D007588 2.2e-30 136.7 228 38.2
SGA_v2.0_scaffold170G38812 Striga asiatica HOM05D006456 ORTHO05D007588 2.2e-30 136.7 235 37.9
Thhalv10019127m.g Eutrema salsugineum HOM05D006456 ORTHO05D007588 2.9e-30 136.3 228 36.8
Peaxi162Scf00520g00114 Petunia axillaris HOM05D006456 ORTHO05D007588 2.9e-30 136.3 133 54.1
Sed0027511 Sechium edule HOM05D006456 ORTHO05D007588 2.9e-30 136.3 238 39.5
FAN07G1047 Fragaria x ananassa HOM05D006456 ORTHO05D008764 3.8e-30 136.0 225 37.8
Atru.chr11.273 Acer truncatum HOM05D006456 ORTHO05D007588 5.0e-30 135.6 239 39.7
CsaV3_5G034690 Cucumis sativus L. HOM05D006456 ORTHO05D007588 8.5e-30 134.8 236 39.0
FvH4_4g26560 Fragaria vesca HOM05D006456 ORTHO05D007588 1.9e-29 133.7 226 35.0
BcaB03g15404 Brassica carinata HOM05D006456 ORTHO05D007588 2.5e-29 133.3 226 38.5
Aqoxy3G00186 Aquilegia oxysepala HOM05D006456 ORTHO05D007588 3.2e-29 132.9 235 34.9
C06p37830 Brassica napus HOM05D006456 ORTHO05D007588 3.2e-29 132.9 232 37.1
FAN12G0878 Fragaria x ananassa HOM05D006456 ORTHO05D007588 4.2e-29 132.5 226 36.7
FAN12G2031 Fragaria x ananassa HOM05D006456 ORTHO05D007588 4.2e-29 132.5 232 36.2
FAN22G1705 Fragaria x ananassa HOM05D006456 ORTHO05D007588 7.2e-29 131.7 233 36.9
Carub.0002s1467 Capsella rubella HOM05D006456 ORTHO05D007588 9.5e-29 131.3 232 34.9
PGSC0003DMG400010378 Solanum tuberosum HOM05D006456 ORTHO05D007588 9.5e-29 131.3 132 52.3
Eucgr.G02230 Eucalyptus grandis HOM05D006456 ORTHO05D007588 1.2e-28 131.0 132 50.0
Phvul.007G033000 Phaseolus vulgaris HOM05D006456 ORTHO05D007588 1.6e-28 130.6 229 37.6
TPR.G4830 Trifolium pratense HOM05D006456 ORTHO05D007588 1.6e-28 130.6 230 36.5
CARHR060870 Cardamine hirsuta HOM05D006456 ORTHO05D007588 2.7e-28 129.8 232 34.9
BcaC08g45988 Brassica carinata HOM05D006456 ORTHO05D007588 3.6e-28 129.4 229 36.7
Lalb_Chr10g0096361 Lupinus albus HOM05D006456 ORTHO05D007588 4.7e-28 129.0 231 36.4
Ca_11124_v3 Cicer arietinum L. HOM05D006456 ORTHO05D007588 6.1e-28 128.6 229 38.0
PGR119G2311 Punica granatum HOM05D006456 ORTHO05D007588 1.0e-27 127.9 237 37.1
Lj6P752T19 Lonicera japonica HOM05D006456 ORTHO05D007588 1.8e-27 127.1 125 52.8
Medtr1g109370 Medicago truncatula HOM05D006456 ORTHO05D007588 1.8e-27 127.1 237 36.3
Sc11g0003890 Simmondsia chinensis HOM05D006456 ORTHO05D007588 1.8e-27 127.1 276 34.1
A07p32110 Brassica napus HOM05D006456 ORTHO05D007588 3.0e-27 126.3 229 37.1
AT1G68185 Arabidopsis thaliana HOM05D006456 ORTHO05D007588 5.2e-27 125.6 229 33.6
Zm00001eb357890 Zea mays HOM05D006456 ORTHO05D007588 2.6e-26 123.2 229 45.0
ATR0053G055 Amborella trichopoda HOM05D006456 ORTHO05D007588 4.4e-26 122.5 234 36.8
AUR62014103 Chenopodium quinoa HOM05D006456 ORTHO05D007588 7.5e-26 121.7 228 40.8
AUR62002792 Chenopodium quinoa HOM05D006456 ORTHO05D007588 1.3e-25 120.9 231 37.7
Atru.chr11.288 Acer truncatum HOM05D006456 ORTHO05D007588 1.7e-25 120.6 239 37.2
Lalb_Chr17g0338791 Lupinus albus HOM05D006456 ORTHO05D007588 2.2e-25 120.2 231 33.3
Migut.E00381 Erythranthe guttata HOM05D006456 ORTHO05D007588 2.8e-25 119.8 129 48.1
Os01g0607300 Oryza sativa ssp. japonica HOM05D006456 ORTHO05D007588 2.8e-25 119.8 241 34.4
THA.LOC104801669 Tarenaya hassleriana HOM05D006456 ORTHO05D007588 3.7e-25 119.4 229 37.1
RcHm_v2.0_Chr4g0434211 Rosa chinensis HOM05D006456 ORTHO05D007588 6.3e-25 118.6 130 47.7
EL10Ac6g14282 Beta vulgaris HOM05D006456 ORTHO05D007588 8.3e-25 118.2 133 45.9
Sed0026587 Sechium edule HOM05D006456 ORTHO05D007588 1.1e-24 117.9 136 49.3
arahy.Tifrunner.gnm1.ann1.UW2YW6 Arachis hypogaea HOM05D006456 ORTHO05D007588 1.4e-24 117.5 230 37.4
Psat6g223800 Pisum sativum HOM05D006456 ORTHO05D007588 1.8e-24 117.1 231 34.6
Ah.02g128170 Amaranthus hybridus HOM05D006456 ORTHO05D007588 4.1e-24 115.9 233 38.6
Sp5g23190 Schrenkiella parvula HOM05D006456 ORTHO05D007588 7.0e-24 115.2 251 33.1
VMungo0720G1166 Vigna mungo HOM05D006456 ORTHO05D007588 7.0e-24 115.2 129 45.7
arahy.Tifrunner.gnm1.ann1.WCM1NC Arachis hypogaea HOM05D006456 ORTHO05D007588 9.2e-24 114.8 227 41.4
HanXRQChr17g0556611 Helianthus annuus HOM05D006456 ORTHO05D007588 4.5e-23 112.5 134 47.8
AL2G27020 Arabidopsis lyrata HOM05D006456 ORTHO05D007588 7.7e-23 111.7 229 32.3
Potri.010G118900 Populus trichocarpa HOM05D006456 ORTHO05D007588 3.8e-22 109.4 224 36.2
Cpa.g.sc65.75 Carica papaya HOM05D006456 ORTHO05D007588 5.0e-22 109.0 139 47.5
Sabra10G0089400 Salix brachista HOM05D006456 ORTHO05D007588 6.1e-20 102.1 86 60.5
CsaV3_5G006740 Cucumis sativus L. HOM05D006456 ORTHO05D007588 1.2e-18 97.8 248 31.9
BolC6t38884H Brassica oleracea HOM05D006456 ORTHO05D007588 3.4e-18 96.3 119 43.7
BraA07t30839Z Brassica rapa HOM05D006456 ORTHO05D007588 7.5e-18 95.1 119 43.7
Nitab4.5_0012897g0010 Nicotiana tabacum HOM05D006456 ORTHO05D007588 1.6e-15 87.4 197 38.1
COL.COLO4_36793 Corchorus olitorius HOM05D006456 ORTHO05D007588 2.8e-12 76.6 53 60.4
Pp3c2_12120 Physcomitrium patens HOM05D006456 ORTHO05D007588 2.3e-11 73.6 248 27.0
Pp3c14_19600 Physcomitrium patens HOM05D006456 ORTHO05D007588 1.3e-09 67.8 249 26.1
CBR_g17172 Chara braunii HOM05D006456 ORTHO05D007588 3.7e-09 66.2 82 42.7
Mapoly0066s0083 Marchantia polymorpha HOM05D006456 ORTHO05D007588 4.1e-08 62.8 248 27.0
SHI16259 Sapria himalayana HOM05D006456 ORTHO05D007588 1.6e-07 60.8 50 56.0
Thhalv10015519m.g Eutrema salsugineum HOM05D000984 ORTHO05D001096 1.7e-06 57.4 82 35.4


User provided reference genes

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