Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_004857 Vanilla planifolia HOM05D006436 ORTHO05D008011 5.0e-67 258.1 174 100.0
Aqoxy7G01157 Aquilegia oxysepala HOM05D006436 ORTHO05D008011 1.3e-51 206.8 174 80.5
MBI18_g05914_MAGBIO Magnolia biondii HOM05D006436 ORTHO05D008011 3.8e-51 205.3 174 81.0
ECA234G4304 Erigeron canadensis HOM05D006436 ORTHO05D008011 9.4e-50 200.7 174 78.7
Eucgr.J01642 Eucalyptus grandis HOM05D006436 ORTHO05D008011 1.2e-49 200.3 174 77.6
Thecc.09G311900 Theobroma cacao HOM05D006436 ORTHO05D008011 1.6e-49 199.9 174 81.6
CSS0031788 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 6.1e-49 198.0 174 81.6
RcHm_v2.0_Chr7g0218931 Rosa chinensis HOM05D006436 ORTHO05D008011 6.1e-49 198.0 174 81.6
Zm00001eb188680 Zea mays HOM05D006436 ORTHO05D008011 6.1e-49 198.0 174 81.6
Ca_05765_v3 Cicer arietinum L. HOM05D006436 ORTHO05D008011 8.0e-49 197.6 174 79.3
TAR365G0111 Trochodendron aralioides HOM05D006436 ORTHO05D008011 8.0e-49 197.6 174 81.0
Hma1.2p1_0158F.1_g069740 Hydrangea macrophylla HOM05D006436 ORTHO05D008011 1.0e-48 197.2 174 82.2
FAN08G3413 Fragaria x ananassa HOM05D006436 ORTHO05D008011 1.4e-48 196.8 174 59.8
Ca_18506_v3 Cicer arietinum L. HOM05D006436 ORTHO05D008011 1.8e-48 196.4 174 78.7
Os11g0546200 Oryza sativa ssp. japonica HOM05D006436 ORTHO05D008011 1.8e-48 196.4 174 80.5
HanXRQChr10g0309911 Helianthus annuus HOM05D006436 ORTHO05D008011 2.3e-48 196.1 174 81.6
QL08p017466 Quercus lobata HOM05D006436 ORTHO05D008011 2.3e-48 196.1 175 72.6
FvH4_5g27560 Fragaria vesca HOM05D006436 ORTHO05D008011 3.0e-48 195.7 174 81.0
ATR0706G244 Amborella trichopoda HOM05D006436 ORTHO05D008011 3.9e-48 195.3 174 82.2
THA.LOC104823829 Tarenaya hassleriana HOM05D006436 ORTHO05D008011 6.7e-48 194.5 174 78.7
FAN18G1736 Fragaria x ananassa HOM05D006436 ORTHO05D008011 1.1e-47 193.7 174 80.5
Ciclev10022503m.g Citrus clementina HOM05D006436 ORTHO05D008011 1.5e-47 193.4 174 78.2
LjContig00141g0009494 Lotus japonicus HOM05D006436 ORTHO05D008011 1.5e-47 193.4 174 78.2
Potri.001G225300 Populus trichocarpa HOM05D006436 ORTHO05D008011 1.5e-47 193.4 174 81.0
Rhsim11G0087100 Rhododendron simsii HOM05D006436 ORTHO05D008011 2.0e-47 193.0 173 82.1
arahy.Tifrunner.gnm1.ann1.1G92VG Arachis hypogaea HOM05D006436 ORTHO05D008011 4.4e-47 191.8 174 79.3
Peaxi162Scf00442g00063 Petunia axillaris HOM05D006436 ORTHO05D008011 4.4e-47 191.8 174 78.2
arahy.Tifrunner.gnm1.ann1.QIUU4Q Arachis hypogaea HOM05D006436 ORTHO05D008011 5.7e-47 191.4 174 77.0
Manes.02G134600 Manihot esculenta HOM05D006436 ORTHO05D008011 7.4e-47 191.0 175 57.1
arahy.Tifrunner.gnm1.ann1.RB24L7 Arachis hypogaea HOM05D006436 ORTHO05D008011 9.7e-47 190.7 174 76.4
CiPaw.03G076800 Carya illinoinensis HOM05D006436 ORTHO05D008011 9.7e-47 190.7 175 79.4
MD09G1253300 Malus domestica HOM05D006436 ORTHO05D008011 9.7e-47 190.7 177 78.0
Sed0003659 Sechium edule HOM05D006436 ORTHO05D008011 9.7e-47 190.7 172 78.5
Atru.chr1.2057 Acer truncatum HOM05D006436 ORTHO05D008011 1.3e-46 190.3 174 78.7
Lj4C253G7 Lonicera japonica HOM05D006436 ORTHO05D008011 1.3e-46 190.3 174 80.5
PGR042G2272 Punica granatum HOM05D006436 ORTHO05D008011 1.3e-46 190.3 175 79.4
arahy.Tifrunner.gnm1.ann1.7TMM1B Arachis hypogaea HOM05D006436 ORTHO05D008011 2.2e-46 189.5 174 73.6
Gohir.D07G105500 Gossypium hirsutum HOM05D006436 ORTHO05D008011 2.2e-46 189.5 176 78.4
Gorai.001G113600 Gossypium raimondii HOM05D006436 ORTHO05D008011 2.2e-46 189.5 176 78.4
Phvul.008G233200 Phaseolus vulgaris HOM05D006436 ORTHO05D008011 3.7e-46 188.7 174 76.4
AT5G37290 Arabidopsis thaliana HOM05D006436 ORTHO05D008011 4.8e-46 188.3 176 75.6
Psat2g043120 Pisum sativum HOM05D006436 ORTHO05D008011 4.8e-46 188.3 174 77.6
Prupe.3G143200 Prunus persica HOM05D006436 ORTHO05D008011 4.8e-46 188.3 175 80.0
Cc07_g12850 Coffea canephora HOM05D006436 ORTHO05D008011 6.3e-46 188.0 174 77.6
MELO3C025074.2 Cucumis melo HOM05D006436 ORTHO05D008011 6.3e-46 188.0 172 77.3
Cpa.g.sc178.16 Carica papaya HOM05D006436 ORTHO05D008011 8.2e-46 187.6 174 79.3
CAN.G268.8 Capsicum annuum HOM05D006436 ORTHO05D008011 1.1e-45 187.2 174 77.6
Solyc04g014610.4 Solanum lycopersicum HOM05D006436 ORTHO05D008011 1.1e-45 187.2 174 78.2
Sopen04g006750 Solanum pennellii HOM05D006436 ORTHO05D008011 1.1e-45 187.2 174 78.2
TWI77G0906 Tripterygium wilfordii HOM05D006436 ORTHO05D008011 1.1e-45 187.2 175 69.7
CsaV3_5G020600 Cucumis sativus L. HOM05D006436 ORTHO05D008011 1.8e-45 186.4 172 77.3
Gohir.A07G101500 Gossypium hirsutum HOM05D006436 ORTHO05D008011 2.4e-45 186.0 176 77.8
Nitab4.5_0005193g0010 Nicotiana tabacum HOM05D006436 ORTHO05D008011 2.4e-45 186.0 174 77.0
PGSC0003DMG400024110 Solanum tuberosum HOM05D006436 ORTHO05D008011 2.4e-45 186.0 174 77.6
Oeu012529.1 Olea europaea HOM05D006436 ORTHO05D008011 3.1e-45 185.7 174 78.2
Dinv19074 Davidia involucrata HOM05D006436 ORTHO05D008011 5.3e-45 184.9 174 78.2
Thhalv10027956m.g Eutrema salsugineum HOM05D006436 ORTHO05D008011 5.3e-45 184.9 176 77.3
Glyma.14G210900 Glycine max HOM05D006436 ORTHO05D008011 5.3e-45 184.9 174 75.9
Lalb_Chr16g0392121 Lupinus albus HOM05D006436 ORTHO05D008011 5.3e-45 184.9 174 76.4
Medtr5g077040 Medicago truncatula HOM05D006436 ORTHO05D008011 7.0e-45 184.5 174 77.0
Sopen04g027290 Solanum pennellii HOM05D006436 ORTHO05D008011 9.1e-45 184.1 174 77.0
Lsat_1_v5_gn_5_79100 Lactuca sativa HOM05D006436 ORTHO05D008011 1.6e-44 183.3 174 79.3
Carub.0007s3240 Capsella rubella HOM05D006436 ORTHO05D008011 3.5e-44 182.2 176 76.1
Solyc04g071330.4 Solanum lycopersicum HOM05D006436 ORTHO05D008011 3.5e-44 182.2 174 76.4
FAN18G0548 Fragaria x ananassa HOM05D006436 ORTHO05D008011 4.5e-44 181.8 197 51.8
vmacro01486 Vaccinium macrocarpon HOM05D006436 ORTHO05D008011 5.9e-44 181.4 174 78.2
GSVIVG01035239001 Vitis vinifera HOM05D006436 ORTHO05D008011 5.9e-44 181.4 174 76.4
Carub.0007s3243 Capsella rubella HOM05D006436 ORTHO05D008011 7.7e-44 181.0 176 75.6
Sp1g30670 Schrenkiella parvula HOM05D006436 ORTHO05D008011 1.0e-43 180.6 176 76.7
VMungo0647G0400 Vigna mungo HOM05D006436 ORTHO05D008011 1.3e-43 180.3 174 74.1
BcaB03g13643 Brassica carinata HOM05D006436 ORTHO05D008011 2.9e-43 179.1 176 76.1
CARHR215800 Cardamine hirsuta HOM05D006436 ORTHO05D008011 1.1e-42 177.2 176 75.0
PSO063G3804 Papaver somniferum HOM05D006436 ORTHO05D008011 1.9e-42 176.4 173 75.7
AL7G45650 Arabidopsis lyrata HOM05D006436 ORTHO05D008011 2.5e-42 176.0 176 76.1
BcaC01g04932 Brassica carinata HOM05D006436 ORTHO05D008011 5.5e-42 174.9 175 75.4
Oeu039710.1 Olea europaea HOM05D006436 ORTHO05D008011 5.5e-42 174.9 174 76.4
BraA03t11880Z Brassica rapa HOM05D006436 ORTHO05D008011 7.2e-42 174.5 176 54.0
CANSAT80G1957 Cannabis sativa HOM05D006436 ORTHO05D008011 3.6e-41 172.2 174 74.7
C03p31970 Brassica napus HOM05D006436 ORTHO05D008011 8.0e-41 171.0 176 52.8
BolC3t15539H Brassica oleracea HOM05D006436 ORTHO05D008011 8.0e-41 171.0 176 52.8
Sabra16G0133900 Salix brachista HOM05D006436 ORTHO05D008011 5.2e-40 168.3 247 42.5
unitig_61.g26181 Utricularia gibba HOM05D006436 ORTHO05D008011 1.2e-39 167.2 191 48.2
COL.COLO4_18608 Corchorus olitorius HOM05D006436 ORTHO05D008011 1.5e-39 166.8 158 77.8
Sc15g0000210 Simmondsia chinensis HOM05D006436 ORTHO05D008011 2.0e-39 166.4 175 50.9
FvH4_5g26310 Fragaria vesca HOM05D006436 ORTHO05D008011 2.6e-39 166.0 171 53.2
MSTRG.12143 Avicennia marina HOM05D006436 ORTHO05D008011 5.7e-39 164.9 174 73.6
SEGI_01802 Sequoiadendron giganteum HOM05D006436 ORTHO05D008011 9.7e-39 164.1 151 53.6
Migut.A01047 Erythranthe guttata HOM05D006436 ORTHO05D008011 1.3e-38 163.7 174 72.4
Hund24464 Selenicereus undatus HOM05D006436 ORTHO05D008011 1.7e-38 163.3 175 50.9
SGA_v2.0_scaffold24G10269 Striga asiatica HOM05D006436 ORTHO05D008011 1.7e-38 163.3 204 60.8
Cfa007759 Carpinus fangiana HOM05D006436 ORTHO05D008011 2.2e-38 162.9 174 50.6
Mapoly0028s0068 Marchantia polymorpha HOM05D006436 ORTHO05D008011 8.2e-38 161.0 173 49.7
SMO347G0032 Selaginella moellendorffii HOM05D006436 ORTHO05D008011 9.1e-37 157.5 175 44.6
Dinv28234 Davidia involucrata HOM05D006436 ORTHO05D008011 1.2e-36 157.1 145 82.8
Duzib168G0581 Durio zibethinus HOM05D006436 ORTHO05D008011 3.2e-34 149.1 88 81.8
CDE11G1230 Ceratophyllum demersum HOM05D006436 ORTHO05D008011 5.5e-34 148.3 138 72.5
EL10Ac5g11211 Beta vulgaris HOM05D006436 ORTHO05D008011 2.1e-33 146.4 175 66.9
ClCG01G008580 Citrullus lanatus HOM05D006436 ORTHO05D008011 3.6e-33 145.6 136 80.9
FAN13G2473 Fragaria x ananassa HOM05D006436 ORTHO05D008011 1.4e-32 143.7 170 48.8
DCAR_006063 Daucus carota HOM05D006436 ORTHO05D008011 2.3e-32 142.9 140 79.3
Cc00_g04020 Coffea canephora HOM05D006436 ORTHO05D008011 4.0e-32 142.1 173 48.6
AUR62028451 Chenopodium quinoa HOM05D003339 ORTHO05D003847 6.8e-32 141.4 172 70.9
Aa31LG5G11620 Aethionema arabicum HOM05D006436 ORTHO05D008011 8.8e-32 141.0 192 64.6
AUR62026125 Chenopodium quinoa HOM05D003339 ORTHO05D003847 8.8e-32 141.0 89 77.5
Ah.14g085550 Amaranthus hybridus HOM05D000477 ORTHO05D000338 2.6e-31 139.4 89 77.5
SalBow6G7138 Salvia bowleyana HOM05D006436 ORTHO05D008011 2.6e-31 139.4 174 66.7
AUR62026126 Chenopodium quinoa HOM05D006436 ORTHO05D008011 3.4e-31 139.0 89 76.4
Nitab4.5_0012165g0010 Nicotiana tabacum HOM05D006436 ORTHO05D008011 9.8e-31 137.5 138 79.0
Nitab4.5_0000574g0240 Nicotiana tabacum HOM05D006436 ORTHO05D008011 1.3e-30 137.1 84 76.2
PGSC0003DMG400023565 Solanum tuberosum HOM05D006436 ORTHO05D008011 2.8e-30 136.0 174 46.0
AUR62028452 Chenopodium quinoa HOM05D006436 ORTHO05D008011 4.8e-30 135.2 89 76.4
CSS0035006 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 2.3e-27 126.3 123 74.0
AagrBONN_evm.TU.Sc2ySwM_368.3316 Anthoceros agrestis HOM05D006436 ORTHO05D008011 1.9e-26 123.2 88 62.5
Nn4g25693 Nelumbo nucifera HOM05D006436 ORTHO05D008011 7.0e-21 104.8 118 49.2
arahy.Tifrunner.gnm1.ann1.8KE236 Arachis hypogaea HOM05D006436 ORTHO05D008011 1.2e-20 104.0 213 34.7
Haze_14313 Corylus avellana HOM05D006436 ORTHO05D008011 7.8e-20 101.3 119 46.2
Thhalv10028339m.g Eutrema salsugineum HOM05D006436 ORTHO05D008011 6.6e-19 98.2 128 43.8
CSS0025543 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 4.7e-17 92.0 165 37.6
CBR_g12236 Chara braunii HOM05D006436 ORTHO05D008011 2.0e-15 86.7 114 41.2
Thecc.05G304200 Theobroma cacao HOM05D006436 ORTHO05D008011 2.5e-10 69.7 96 38.5
CsaV3_1G031100 Cucumis sativus L. HOM05D006436 ORTHO05D008011 8.0e-09 64.7 45 57.8
QL03p022571 Quercus lobata HOM05D006436 ORTHO05D008011 4.9e-06 55.5 36 72.2


User provided reference genes

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