Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_004827 Vanilla planifolia HOM05D018615 ORTHO05D003202 3.7e-100 368.2 190 100.0
HPP92_022453 Vanilla planifolia HOM05D018615 ORTHO05D003830 2.0e-37 159.8 117 68.4
HPP92_022456 Vanilla planifolia HOM05D018615 ORTHO05D003830 2.0e-37 159.8 117 68.4
HPP92_022451 Vanilla planifolia HOM05D018615 ORTHO05D003830 2.6e-37 159.5 117 68.4
HPP92_022755 Vanilla planifolia HOM05D018615 ORTHO05D003830 1.3e-33 147.1 117 63.2
HPP92_022455 Vanilla planifolia HOM05D018615 ORTHO05D003830 2.6e-21 106.3 89 64.0
arahy.Tifrunner.gnm1.ann1.8W4I3Q Arachis hypogaea HOM05D003638 ORTHO05D003202 1.4e-06 57.4 53 49.1
Glyma.09G096300 Glycine max HOM05D003638 ORTHO05D003202 1.4e-06 57.4 55 52.7
Glyma.15G201800 Glycine max HOM05D003638 ORTHO05D003202 1.8e-06 57.0 53 49.1
Lj6g0008260 Lotus japonicus HOM05D003638 ORTHO05D003202 2.4e-06 56.6 53 49.1
Phvul.009G209800 Phaseolus vulgaris HOM05D003638 ORTHO05D003202 2.4e-06 56.6 64 42.2
Aa31LG10G10560 Aethionema arabicum HOM05D003544 ORTHO05D003830 4.1e-06 55.8 54 40.7
Thhalv10010626m.g Eutrema salsugineum HOM05D003544 ORTHO05D003830 4.1e-06 55.8 54 40.7
VMungo1309G1330 Vigna mungo HOM05D003638 ORTHO05D003202 4.1e-06 55.8 64 42.2
Potri.010G201500 Populus trichocarpa HOM05D003544 ORTHO05D003830 5.3e-06 55.5 56 41.1
Solyc06g005630.3 Solanum lycopersicum HOM05D003544 ORTHO05D003830 5.3e-06 55.5 60 40.0
Sopen06g001600 Solanum pennellii HOM05D003544 ORTHO05D003830 5.3e-06 55.5 60 40.0
HPP92_022452 Vanilla planifolia HOM05D056218 ORTHO05D003830 5.3e-06 55.5 43 44.2
VMungo1383G2117 Vigna mungo HOM05D003544 ORTHO05D003830 5.3e-06 55.5 56 41.1
Medtr2g461020 Medicago truncatula HOM05D003638 ORTHO05D003202 7.0e-06 55.1 53 43.4
QL08p060246 Quercus lobata HOM05D003544 ORTHO05D003830 7.0e-06 55.1 56 41.1
QL08p060482 Quercus lobata HOM05D003544 ORTHO05D003830 7.0e-06 55.1 56 41.1
Sabra10G0155500 Salix brachista HOM05D003544 ORTHO05D003830 7.0e-06 55.1 56 41.1
TPR.G25664 Trifolium pratense HOM05D003638 ORTHO05D003202 7.0e-06 55.1 53 43.4
Aqoxy1G00897 Aquilegia oxysepala HOM05D003544 ORTHO05D003830 9.1e-06 54.7 142 26.8
COL.COLO4_15089 Corchorus olitorius HOM05D003544 ORTHO05D003830 9.1e-06 54.7 56 41.1
Gohir.A11G174300 Gossypium hirsutum HOM05D002398 ORTHO05D002817 9.1e-06 54.7 150 28.0
Sc04g0001110 Simmondsia chinensis HOM05D000082 ORTHO05D000038 9.1e-06 54.7 57 38.6


User provided reference genes

Program Settings