Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_004788 Vanilla planifolia HOM05D005853 ORTHO05D007308 1.4e-24 115.9 81 100.0
Glyma.08G205900 Glycine max HOM05D005853 ORTHO05D007308 9.9e-10 66.6 46 76.1
VMungo0331G1451 Vigna mungo HOM05D005853 ORTHO05D007308 9.9e-10 66.6 46 69.6
BcaB03g16471 Brassica carinata HOM05D005853 ORTHO05D007308 1.3e-09 66.2 46 67.4
Oeu024066.2 Olea europaea HOM05D005853 ORTHO05D007308 3.7e-09 64.7 36 91.7
Phvul.010G149900 Phaseolus vulgaris HOM05D005853 ORTHO05D007308 3.7e-09 64.7 46 67.4
THA.LOC104808760 Tarenaya hassleriana HOM05D005853 ORTHO05D007308 4.9e-09 64.3 45 66.7
BcaC01g02942 Brassica carinata HOM05D005853 ORTHO05D007308 6.4e-09 63.9 45 66.7
BcaC06g36242 Brassica carinata HOM05D005853 ORTHO05D007308 6.4e-09 63.9 45 66.7
A06p34130 Brassica napus HOM05D005853 ORTHO05D007308 6.4e-09 63.9 45 66.7
A07p03810 Brassica napus HOM05D005853 ORTHO05D007308 6.4e-09 63.9 45 66.7
C03p58060 Brassica napus HOM05D005853 ORTHO05D007308 6.4e-09 63.9 45 66.7
C07p06090 Brassica napus HOM05D005853 ORTHO05D007308 6.4e-09 63.9 45 66.7
BolC3t18080H Brassica oleracea HOM05D005853 ORTHO05D007308 6.4e-09 63.9 45 66.7
BolC7t41022H Brassica oleracea HOM05D005853 ORTHO05D007308 6.4e-09 63.9 45 66.7
BraA06t26346Z Brassica rapa HOM05D005853 ORTHO05D007308 6.4e-09 63.9 45 66.7
BraA07t28175Z Brassica rapa HOM05D005853 ORTHO05D007308 6.4e-09 63.9 45 66.7
CiPaw.04G164300 Carya illinoinensis HOM05D005853 ORTHO05D007308 6.4e-09 63.9 46 73.9
THA.LOC104804586 Tarenaya hassleriana HOM05D005853 ORTHO05D007308 1.1e-08 63.2 45 64.4
Cpa.g.sc23.111 Carica papaya HOM05D005853 ORTHO05D007308 3.2e-08 61.6 43 72.1
MSTRG.22678 Avicennia marina HOM05D005853 ORTHO05D007308 4.1e-08 61.2 42 76.2
MBI13_g01620_MAGBIO Magnolia biondii HOM05D005853 ORTHO05D007308 4.1e-08 61.2 45 75.6
Migut.I00880 Erythranthe guttata HOM05D005853 ORTHO05D007308 5.4e-08 60.8 46 60.9
Oeu033499.2 Olea europaea HOM05D005853 ORTHO05D007308 7.1e-08 60.5 70 74.3
Aa31LG8G14610 Aethionema arabicum HOM05D005853 ORTHO05D007308 9.2e-08 60.1 42 66.7
AL3G50100 Arabidopsis lyrata HOM05D005853 ORTHO05D007308 9.2e-08 60.1 42 66.7
AT2G17240 Arabidopsis thaliana HOM05D005853 ORTHO05D007308 9.2e-08 60.1 42 66.7
Carub.0003s3118 Capsella rubella HOM05D005853 ORTHO05D007308 9.2e-08 60.1 42 66.7
Manes.16G116400 Manihot esculenta HOM05D005853 ORTHO05D007308 9.2e-08 60.1 43 62.8
Sp3g30580 Schrenkiella parvula HOM05D005853 ORTHO05D007308 9.2e-08 60.1 42 66.7
TWI34G0492 Tripterygium wilfordii HOM05D005853 ORTHO05D007308 9.2e-08 60.1 42 64.3
Haze_25712 Corylus avellana HOM05D005853 ORTHO05D007308 2.1e-07 58.9 46 71.7
ECA240G1876 Erigeron canadensis HOM05D005853 ORTHO05D007308 2.1e-07 58.9 42 71.4
HanXRQChr09g0239771 Helianthus annuus HOM05D005853 ORTHO05D007308 2.1e-07 58.9 42 71.4
Lsat_1_v5_gn_7_40661 Lactuca sativa HOM05D005853 ORTHO05D007308 2.1e-07 58.9 42 64.3
Gohir.D05G024400 Gossypium hirsutum HOM05D005853 ORTHO05D007308 2.7e-07 58.5 42 64.3
Gorai.009G024500 Gossypium raimondii HOM05D005853 ORTHO05D007308 2.7e-07 58.5 42 76.2
Gohir.A08G241100 Gossypium hirsutum HOM05D005853 ORTHO05D007308 3.5e-07 58.2 43 62.8
Manes.03G020200 Manihot esculenta HOM05D005853 ORTHO05D007308 4.6e-07 57.8 42 61.9
Oeu033500.1 Olea europaea HOM05D005853 ORTHO05D007308 4.6e-07 57.8 62 79.0
Lj3g0010943 Lotus japonicus HOM05D005853 ORTHO05D007308 6.0e-07 57.4 73 67.1
Sabra18G0067400 Salix brachista HOM05D005853 ORTHO05D007308 7.8e-07 57.0 34 73.5
TAR636G2025 Trochodendron aralioides HOM05D005853 ORTHO05D007308 7.8e-07 57.0 34 73.5
MSTRG.11072 Avicennia marina HOM05D005853 ORTHO05D007308 1.0e-06 56.6 41 70.7
Ciclev10009718m.g Citrus clementina HOM05D005853 ORTHO05D007308 1.0e-06 56.6 46 65.2
DCAR_028712 Daucus carota HOM05D005181 ORTHO05D006086 1.0e-06 56.6 42 73.8
Thhalv10022893m.g Eutrema salsugineum HOM05D005853 ORTHO05D007308 1.0e-06 56.6 31 80.6
Gohir.A05G022800 Gossypium hirsutum HOM05D005853 ORTHO05D007308 1.0e-06 56.6 42 73.8
Gohir.A05G022900 Gossypium hirsutum HOM05D005853 ORTHO05D007308 1.0e-06 56.6 42 73.8
Gohir.D05G024300 Gossypium hirsutum HOM05D005853 ORTHO05D007308 1.0e-06 56.6 42 73.8
Gorai.009G024400 Gossypium raimondii HOM05D005853 ORTHO05D007308 1.0e-06 56.6 42 73.8
TAR624G1380 Trochodendron aralioides HOM05D005853 ORTHO05D007308 1.3e-06 56.2 42 73.8
Pp3c2_3480 Physcomitrium patens HOM05D005853 ORTHO05D007308 1.7e-06 55.8 42 59.5
Potri.018G079700 Populus trichocarpa HOM05D005853 ORTHO05D007308 1.7e-06 55.8 42 59.5
QL02p085450 Quercus lobata HOM05D005853 ORTHO05D007308 1.7e-06 55.8 43 69.8
Aqoxy7G03791 Aquilegia oxysepala HOM05D005853 ORTHO05D007308 2.3e-06 55.5 47 61.7
Pp3c1_36270 Physcomitrium patens HOM05D005853 ORTHO05D007308 2.3e-06 55.5 67 62.7
Sopen04g003890 Solanum pennellii HOM05D005853 ORTHO05D007308 3.0e-06 55.1 35 71.4
CDE04G2734 Ceratophyllum demersum HOM05D005853 ORTHO05D007308 3.9e-06 54.7 42 71.4
CSS0003127 Camellia sinensis var. sinensis HOM05D005853 ORTHO05D007308 5.1e-06 54.3 43 69.8
CSS0011641 Camellia sinensis var. sinensis HOM05D005853 ORTHO05D007308 5.1e-06 54.3 43 69.8
GSVIVG01015393001 Vitis vinifera HOM05D005853 ORTHO05D007308 6.6e-06 53.9 43 69.8
GSVIVG01017090001 Vitis vinifera HOM05D005853 ORTHO05D007308 6.6e-06 53.9 42 71.4
Duzib150G0727 Durio zibethinus HOM05D005853 ORTHO05D007308 8.6e-06 53.5 44 61.4


User provided reference genes

Program Settings