Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_004777 Vanilla planifolia HOM05D006149 ORTHO05D007341 5.1e-89 331.3 193 100.0
VMungo0720G1566 Vigna mungo HOM05D006149 ORTHO05D007341 1.6e-37 160.2 172 68.0
Phvul.007G040000 Phaseolus vulgaris HOM05D006149 ORTHO05D007341 2.3e-36 156.4 89 91.0
Os09g0104300 Oryza sativa ssp. japonica HOM05D006149 ORTHO05D007341 5.0e-36 155.2 126 69.8
Nn4g25119 Nelumbo nucifera HOM05D006149 ORTHO05D007341 1.1e-35 154.1 139 66.9
Ca_11076_v3 Cicer arietinum L. HOM05D006149 ORTHO05D007341 1.9e-35 153.3 87 92.0
Lj5g0003815 Lotus japonicus HOM05D006149 ORTHO05D007341 1.9e-35 153.3 126 71.4
Hund06318 Selenicereus undatus HOM05D006149 ORTHO05D007341 2.5e-35 152.9 180 60.6
Cfa004575 Carpinus fangiana HOM05D006149 ORTHO05D007341 3.3e-35 152.5 118 72.0
COL.COLO4_32597 Corchorus olitorius HOM05D006149 ORTHO05D007341 4.2e-35 152.1 100 82.0
Glyma.20G128800 Glycine max HOM05D006149 ORTHO05D007341 5.5e-35 151.8 130 70.0
TWI34G0529 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 5.5e-35 151.8 128 68.8
ATR0618G054 Amborella trichopoda HOM05D006149 ORTHO05D007341 9.5e-35 151.0 124 69.4
Nn1g04703 Nelumbo nucifera HOM05D006149 ORTHO05D007341 9.5e-35 151.0 137 66.4
Cpa.g.sc76.22 Carica papaya HOM05D006149 ORTHO05D007341 1.2e-34 150.6 135 67.4
MELO3C019546.2 Cucumis melo HOM05D006149 ORTHO05D007341 1.6e-34 150.2 86 87.2
Medtr1g107435 Medicago truncatula HOM05D006149 ORTHO05D007341 2.1e-34 149.8 124 71.8
CsaV3_3G018210 Cucumis sativus L. HOM05D006149 ORTHO05D007341 3.6e-34 149.1 86 86.0
Gohir.A03G186300 Gossypium hirsutum HOM05D006149 ORTHO05D007341 3.6e-34 149.1 122 70.5
Sc08g0001390 Simmondsia chinensis HOM05D006149 ORTHO05D007341 3.6e-34 149.1 124 72.6
arahy.Tifrunner.gnm1.ann1.GUMB1Z Arachis hypogaea HOM05D006149 ORTHO05D007341 6.1e-34 148.3 166 62.7
Psat6g219120 Pisum sativum HOM05D006149 ORTHO05D007341 6.1e-34 148.3 98 82.7
Thecc.02G107700 Theobroma cacao HOM05D006149 ORTHO05D007341 8.0e-34 147.9 98 79.6
arahy.Tifrunner.gnm1.ann1.0F7AFP Arachis hypogaea HOM05D006149 ORTHO05D007341 1.0e-33 147.5 166 62.7
Duzib052G0317 Durio zibethinus HOM05D006149 ORTHO05D007341 1.0e-33 147.5 101 78.2
PGR142G0815 Punica granatum HOM05D006149 ORTHO05D007341 1.8e-33 146.7 125 68.8
Sed0001717 Sechium edule HOM05D006149 ORTHO05D007341 1.8e-33 146.7 85 85.9
TAR628G0594 Trochodendron aralioides HOM05D006149 ORTHO05D007341 2.3e-33 146.4 85 87.1
CDE02G2507 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 3.0e-33 146.0 135 65.2
CDE02G4185 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 3.0e-33 146.0 135 65.2
TWI32G0763 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 3.0e-33 146.0 124 67.7
Gohir.D02G207100 Gossypium hirsutum HOM05D006149 ORTHO05D007341 4.0e-33 145.6 120 70.0
Gorai.005G235000 Gossypium raimondii HOM05D006149 ORTHO05D007341 4.0e-33 145.6 120 70.0
Thhalv10022867m.g Eutrema salsugineum HOM05D006149 ORTHO05D007341 6.8e-33 144.8 131 64.1
Sabra09G0073900 Salix brachista HOM05D006149 ORTHO05D007341 6.8e-33 144.8 121 69.4
Glyma.10G262200 Glycine max HOM05D006149 ORTHO05D007341 8.9e-33 144.4 80 92.5
MSTRG.16714 Avicennia marina HOM05D006149 ORTHO05D007341 1.2e-32 144.1 139 71.9
Lj9A321G81 Lonicera japonica HOM05D006149 ORTHO05D007341 1.2e-32 144.1 137 65.0
Manes.10G076500 Manihot esculenta HOM05D006149 ORTHO05D007341 1.2e-32 144.1 93 82.8
Sp3g28510 Schrenkiella parvula HOM05D006149 ORTHO05D007341 2.0e-32 143.3 130 63.8
AL3G46990 Arabidopsis lyrata HOM05D006149 ORTHO05D007341 3.4e-32 142.5 136 63.2
THA.LOC104807242 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 3.4e-32 142.5 126 64.3
Dinv42191 Davidia involucrata HOM05D006149 ORTHO05D007341 5.7e-32 141.7 125 68.0
CANSAT25G3711 Cannabis sativa HOM05D006149 ORTHO05D007341 7.5e-32 141.4 130 66.9
CDE04G1609 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 9.8e-32 141.0 103 74.8
Rhsim05G0088300 Rhododendron simsii HOM05D006149 ORTHO05D007341 9.8e-32 141.0 84 85.7
THA.LOC104819555 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 1.3e-31 140.6 82 86.6
vmacro19450 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 1.3e-31 140.6 83 85.5
unitig_22.g5723 Utricularia gibba HOM05D006149 ORTHO05D007341 2.2e-31 139.8 130 65.4
BcaB03g16271 Brassica carinata HOM05D006149 ORTHO05D007341 2.8e-31 139.4 130 63.1
Potri.001G300300 Populus trichocarpa HOM05D006149 ORTHO05D007341 2.8e-31 139.4 128 63.3
BcaC04g22139 Brassica carinata HOM05D006149 ORTHO05D007341 3.7e-31 139.0 126 64.3
C07p08530 Brassica napus HOM05D006149 ORTHO05D007341 3.7e-31 139.0 126 64.3
BolC7t41265H Brassica oleracea HOM05D006149 ORTHO05D007341 3.7e-31 139.0 126 64.3
AUR62039082 Chenopodium quinoa HOM05D006149 ORTHO05D007341 3.7e-31 139.0 139 60.4
Dinv15763 Davidia involucrata HOM05D006149 ORTHO05D007341 3.7e-31 139.0 177 58.2
FvH4_2g05220 Fragaria vesca HOM05D006149 ORTHO05D007341 3.7e-31 139.0 81 87.7
FAN15G1894 Fragaria x ananassa HOM05D006149 ORTHO05D007341 3.7e-31 139.0 81 87.7
FAN24G0478 Fragaria x ananassa HOM05D000289 ORTHO05D007341 3.7e-31 139.0 81 87.7
FAN27G1351 Fragaria x ananassa HOM05D000289 ORTHO05D007341 3.7e-31 139.0 81 87.7
RcHm_v2.0_Chr6g0255351 Rosa chinensis HOM05D006149 ORTHO05D007341 3.7e-31 139.0 81 87.7
SGA_v2.0_scaffold225G43080 Striga asiatica HOM05D006149 ORTHO05D007341 3.7e-31 139.0 142 61.3
BcaC06g36046 Brassica carinata HOM05D006149 ORTHO05D007341 4.9e-31 138.7 126 63.5
ClCG05G010280 Citrullus lanatus HOM05D006149 ORTHO05D007341 6.3e-31 138.3 79 86.1
BcaB08g34585 Brassica carinata HOM05D006149 ORTHO05D007341 8.3e-31 137.9 130 62.3
Ciclev10029393m.g Citrus clementina HOM05D006149 ORTHO05D007341 8.3e-31 137.9 118 66.9
Lsat_1_v5_gn_9_111221 Lactuca sativa HOM05D006149 ORTHO05D007341 8.3e-31 137.9 130 62.3
Sed0008540 Sechium edule HOM05D006149 ORTHO05D007341 8.3e-31 137.9 80 85.0
Zm00001eb393310 Zea mays HOM05D006149 ORTHO05D007341 8.3e-31 137.9 129 65.1
MD05G1089500 Malus domestica HOM05D006149 ORTHO05D007341 1.1e-30 137.5 127 64.6
ECA240G2462 Erigeron canadensis HOM05D006149 ORTHO05D007341 2.4e-30 136.3 118 66.9
FAN20G0990 Fragaria x ananassa HOM05D006149 ORTHO05D007341 2.4e-30 136.3 81 86.4
Lalb_Chr21g0308351 Lupinus albus HOM05D006149 ORTHO05D007341 2.4e-30 136.3 118 66.9
HanXRQChr03g0070291 Helianthus annuus HOM05D006149 ORTHO05D007341 3.2e-30 136.0 144 56.9
SalBow6G4084 Salvia bowleyana HOM05D006149 ORTHO05D007341 3.2e-30 136.0 180 59.4
SHI05287 Sapria himalayana HOM05D006149 ORTHO05D007341 3.2e-30 136.0 131 61.8
A07p05350 Brassica napus HOM05D006149 ORTHO05D007341 5.4e-30 135.2 83 81.9
BraA07t28328Z Brassica rapa HOM05D006149 ORTHO05D007341 5.4e-30 135.2 83 81.9
Aa31LG8G13110 Aethionema arabicum HOM05D006149 ORTHO05D007341 1.2e-29 134.0 130 61.5
Sopen01g049800 Solanum pennellii HOM05D006149 ORTHO05D007341 1.2e-29 134.0 130 63.1
PGSC0003DMG400025768 Solanum tuberosum HOM05D006149 ORTHO05D007341 1.2e-29 134.0 130 63.1
Nitab4.5_0002815g0010 Nicotiana tabacum HOM05D006149 ORTHO05D007341 1.6e-29 133.7 131 62.6
Solyc01g107610.4 Solanum lycopersicum HOM05D006149 ORTHO05D007341 1.6e-29 133.7 130 63.1
Zm00001eb020500 Zea mays HOM05D006149 ORTHO05D007341 1.6e-29 133.7 127 62.2
Nitab4.5_0005392g0090 Nicotiana tabacum HOM05D006149 ORTHO05D007341 3.5e-29 132.5 131 61.8
CARHR105640 Cardamine hirsuta HOM05D006149 ORTHO05D007341 5.9e-29 131.7 127 62.2
CSS0036049 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 7.8e-29 131.3 120 65.0
Pp3c2_21780 Physcomitrium patens HOM05D006149 ORTHO05D007341 1.0e-28 131.0 173 54.3
QL11p033743 Quercus lobata HOM05D006149 ORTHO05D007341 1.0e-28 131.0 165 60.0
CAN.G1231.7 Capsicum annuum HOM05D006149 ORTHO05D007341 1.7e-28 130.2 132 59.8
Aqoxy3G02908 Aquilegia oxysepala HOM05D006149 ORTHO05D007341 2.3e-28 129.8 93 74.2
AT2G15270 Arabidopsis thaliana HOM05D006149 ORTHO05D007341 2.3e-28 129.8 127 62.2
Carub.0003s2910 Capsella rubella HOM05D006149 ORTHO05D007341 2.3e-28 129.8 126 62.7
Migut.B00388 Erythranthe guttata HOM05D006149 ORTHO05D007341 2.3e-28 129.8 180 55.6
AagrBONN_evm.TU.Sc2ySwM_228.2976 Anthoceros agrestis HOM05D006149 ORTHO05D007341 3.9e-28 129.0 84 78.6
Eucgr.E02957 Eucalyptus grandis HOM05D006149 ORTHO05D007341 3.9e-28 129.0 90 76.7
SEGI_00829 Sequoiadendron giganteum HOM05D006149 ORTHO05D007341 5.0e-28 128.6 129 59.7
PSO675G5876 Papaver somniferum HOM05D006149 ORTHO05D007341 8.6e-28 127.9 112 66.1
MD05G1088900 Malus domestica HOM05D006149 ORTHO05D007341 3.3e-27 125.9 180 48.9
PSO541G1364 Papaver somniferum HOM05D006149 ORTHO05D007341 4.3e-27 125.6 110 67.3
Actinidia27971 Actinidia chinensis HOM05D006149 ORTHO05D007341 5.6e-27 125.2 92 72.8
SMO364G0740 Selaginella moellendorffii HOM05D006149 ORTHO05D007341 5.6e-27 125.2 101 70.3
Peaxi162Scf00016g02334 Petunia axillaris HOM05D006149 ORTHO05D007341 7.3e-27 124.8 129 60.5
Prupe.8G134800 Prunus persica HOM05D006149 ORTHO05D007341 1.2e-26 124.0 114 64.9
CiPaw.05G011400 Carya illinoinensis HOM05D006149 ORTHO05D007341 1.6e-26 123.6 108 64.8
Sabra16G0188500 Salix brachista HOM05D006149 ORTHO05D007341 1.6e-26 123.6 170 48.2
CANSAT25G0333 Cannabis sativa HOM05D006149 ORTHO05D007341 3.6e-26 122.5 70 90.0
Pp3c1_15220 Physcomitrium patens HOM05D006149 ORTHO05D007341 1.0e-25 120.9 110 65.5
Oeu017469.1 Olea europaea HOM05D006149 ORTHO05D007341 2.3e-25 119.8 126 57.9
Duzib248G1531 Durio zibethinus HOM05D006149 ORTHO05D007341 9.8e-24 114.4 99 69.7
CBR_g44544 Chara braunii HOM05D006149 ORTHO05D007341 2.9e-23 112.8 99 62.6
AUR62010304 Chenopodium quinoa HOM05D006149 ORTHO05D007341 6.4e-23 111.7 117 58.1
vmacro02004 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 6.4e-23 111.7 154 49.4
Rhsim11G0160200 Rhododendron simsii HOM05D006149 ORTHO05D007341 2.4e-22 109.8 188 44.7
Mapoly0056s0071 Marchantia polymorpha HOM05D006149 ORTHO05D007341 3.2e-22 109.4 86 72.1
HanXRQChr02g0033021 Helianthus annuus HOM05D006149 ORTHO05D007341 4.1e-22 109.0 123 53.7
EL10Ac9g22279 Beta vulgaris HOM05D006149 ORTHO05D007341 3.5e-21 105.9 141 51.1
PGR042G0697 Punica granatum HOM05D006149 ORTHO05D007341 1.9e-19 100.1 109 55.0
DCAR_001643 Daucus carota HOM05D006149 ORTHO05D007341 5.2e-17 92.0 106 57.5
Haze_10168 Corylus avellana HOM05D006149 ORTHO05D007341 8.3e-15 84.7 238 32.4
Cre03.g193150 Chlamydomonas reinhardtii HOM05D006149 ORTHO05D007341 7.1e-14 81.6 116 45.7
Ciclev10006213m.g Citrus clementina HOM05D006149 ORTHO05D007341 7.1e-14 81.6 87 54.0
MBI12_g27878_MAGBIO Magnolia biondii HOM05D006149 ORTHO05D007341 1.0e-12 77.8 66 62.1
Ah.01g018230 Amaranthus hybridus HOM05D006149 ORTHO05D007341 5.1e-12 75.5 96 62.5
QL11p033903 Quercus lobata HOM05D006149 ORTHO05D007341 8.6e-12 74.7 90 67.8
Actinidia05494 Actinidia chinensis HOM05D006149 ORTHO05D007341 4.3e-11 72.4 54 74.1
CSS0028016 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 7.3e-11 71.6 82 56.1
TAR376G0787 Trochodendron aralioides HOM05D006149 ORTHO05D007341 1.1e-09 67.8 57 66.7
SMO197G0096 Selaginella moellendorffii HOM05D024641 ORTHO05D007341 4.0e-09 65.9 57 64.9
MCO08G345 Micromonas commoda HOM05D006149 ORTHO05D007341 1.9e-06 57.0 67 44.8
Thecc.04G122800 Theobroma cacao HOM05D006149 ORTHO05D007341 4.1e-06 55.8 42 61.9


User provided reference genes

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