Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_004768 Vanilla planifolia HOM05D000049 ORTHO05D008785 4.0e-70 268.1 147 100.0
Aqoxy5G01153 Aquilegia oxysepala HOM05D000049 ORTHO05D008785 2.7e-29 132.5 136 58.8
Ciclev10029534m.g Citrus clementina HOM05D000049 ORTHO05D008785 6.5e-28 127.9 147 53.7
Phvul.007G038900 Phaseolus vulgaris HOM05D000049 ORTHO05D008785 8.5e-28 127.5 103 65.0
VMungo0720G1000 Vigna mungo HOM05D000049 ORTHO05D008785 8.5e-28 127.5 103 64.1
Glyma.10G263000 Glycine max HOM05D000049 ORTHO05D008785 1.5e-27 126.7 103 63.1
Glyma.20G127500 Glycine max HOM05D000049 ORTHO05D008785 3.2e-27 125.6 102 62.7
TPR.G13867 Trifolium pratense HOM05D000049 ORTHO05D008785 3.2e-27 125.6 110 60.9
Glyma.20G129600 Glycine max HOM05D000049 ORTHO05D008785 5.5e-27 124.8 102 64.7
Thecc.02G106900 Theobroma cacao HOM05D000049 ORTHO05D008785 5.5e-27 124.8 119 61.3
Duzib132G0396 Durio zibethinus HOM05D000049 ORTHO05D008785 7.2e-27 124.4 147 52.4
Migut.N01171 Erythranthe guttata HOM05D000049 ORTHO05D008785 7.2e-27 124.4 105 64.8
Lalb_Chr02g0145351 Lupinus albus HOM05D000049 ORTHO05D008785 7.2e-27 124.4 103 61.2
Lj5g0006015 Lotus japonicus HOM05D000049 ORTHO05D008785 9.4e-27 124.0 103 62.1
Psat6g219680 Pisum sativum HOM05D000049 ORTHO05D008785 9.4e-27 124.0 141 51.8
CDE02G2484 Ceratophyllum demersum HOM05D000049 ORTHO05D008785 1.6e-26 123.2 121 56.2
Nn1g04714 Nelumbo nucifera HOM05D000049 ORTHO05D008785 1.6e-26 123.2 102 64.7
GSVIVG01003167001 Vitis vinifera HOM05D000049 ORTHO05D008785 1.6e-26 123.2 126 55.6
Haze_10161 Corylus avellana HOM05D000049 ORTHO05D008785 2.7e-26 122.5 112 63.4
MD05G1088100 Malus domestica HOM05D000049 ORTHO05D008785 4.7e-26 121.7 133 55.6
Cfa004569 Carpinus fangiana HOM05D000049 ORTHO05D008785 8.0e-26 120.9 109 63.3
MSTRG.5347 Avicennia marina HOM05D000049 ORTHO05D008785 1.0e-25 120.6 117 54.7
DCAR_030806 Daucus carota HOM05D000049 ORTHO05D008785 1.0e-25 120.6 91 64.8
Duzib248G1051 Durio zibethinus HOM05D000049 ORTHO05D008785 1.4e-25 120.2 149 51.0
SGA_v2.0_scaffold393G50708 Striga asiatica HOM05D000049 ORTHO05D008785 1.8e-25 119.8 118 56.8
EL10Ac9g22295 Beta vulgaris HOM05D000049 ORTHO05D008785 2.3e-25 119.4 105 61.9
PGR042G1228 Punica granatum HOM05D000049 ORTHO05D008785 2.3e-25 119.4 145 49.7
Sed0018040 Sechium edule HOM05D000049 ORTHO05D008785 2.3e-25 119.4 126 57.1
AL7G17120 Arabidopsis lyrata HOM05D000049 ORTHO05D008785 3.0e-25 119.0 107 61.7
AT4G34190 Arabidopsis thaliana HOM05D000049 ORTHO05D008785 3.0e-25 119.0 106 61.3
ECA240G2980 Erigeron canadensis HOM05D000049 ORTHO05D000027 3.0e-25 119.0 108 60.2
Prupe.8G134100 Prunus persica HOM05D000049 ORTHO05D008785 3.0e-25 119.0 146 50.0
Cc02_g19180 Coffea canephora HOM05D000049 ORTHO05D008785 6.8e-25 117.9 123 57.7
Oeu010393.1 Olea europaea HOM05D000049 ORTHO05D008785 6.8e-25 117.9 120 55.0
Sc08g0001450 Simmondsia chinensis HOM05D000049 ORTHO05D008785 6.8e-25 117.9 111 59.5
Cpa.g.sc106.84 Carica papaya HOM05D000049 ORTHO05D008785 1.2e-24 117.1 150 48.7
THA.LOC104819560 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 1.2e-24 117.1 153 49.0
Hund06332 Selenicereus undatus HOM05D000049 ORTHO05D008785 1.5e-24 116.7 109 58.7
Manes.02G137400 Manihot esculenta HOM05D000049 ORTHO05D008785 2.0e-24 116.3 144 48.6
Atru.chr5.2581 Acer truncatum HOM05D000049 ORTHO05D008785 2.6e-24 115.9 149 49.7
Oeu018599.1 Olea europaea HOM05D000049 ORTHO05D008785 2.6e-24 115.9 88 65.9
Carub.0007s0619 Capsella rubella HOM05D000049 ORTHO05D008785 3.4e-24 115.5 106 57.5
Eucgr.H03224 Eucalyptus grandis HOM05D000049 ORTHO05D008785 3.4e-24 115.5 107 58.9
SalBow3G3686 Salvia bowleyana HOM05D000049 ORTHO05D008785 3.4e-24 115.5 101 62.4
HanXRQChr03g0070281 Helianthus annuus HOM05D000049 ORTHO05D008785 4.4e-24 115.2 109 56.0
Nitab4.5_0002815g0100 Nicotiana tabacum HOM05D000049 ORTHO05D008785 4.4e-24 115.2 103 61.2
Thhalv10026482m.g Eutrema salsugineum HOM05D000049 ORTHO05D008785 5.7e-24 114.8 152 48.7
Gorai.005G235400 Gossypium raimondii HOM05D000049 ORTHO05D008785 5.7e-24 114.8 152 52.6
Hma1.2p1_0796F.1_g219130 Hydrangea macrophylla HOM05D000049 ORTHO05D008785 7.5e-24 114.4 106 60.4
PGSC0003DMG400025866 Solanum tuberosum HOM05D000049 ORTHO05D008785 7.5e-24 114.4 123 52.0
AUR62039109 Chenopodium quinoa HOM05D000049 ORTHO05D008785 9.8e-24 114.0 105 59.0
FvH4_2g05321 Fragaria vesca HOM05D000049 ORTHO05D008785 9.8e-24 114.0 134 52.2
CARHR242610 Cardamine hirsuta HOM05D000049 ORTHO05D008785 1.3e-23 113.6 147 51.7
Gohir.D02G207500 Gossypium hirsutum HOM05D000049 ORTHO05D008785 1.3e-23 113.6 152 52.6
PSO210G6109 Papaver somniferum HOM05D000049 ORTHO05D008785 1.7e-23 113.2 106 60.4
Solyc01g107660.3 Solanum lycopersicum HOM05D000049 ORTHO05D008785 1.7e-23 113.2 123 50.4
FAN20G0640 Fragaria x ananassa HOM05D000049 ORTHO05D008785 2.2e-23 112.8 147 47.6
Dinv42184 Davidia involucrata HOM05D000049 ORTHO05D008785 2.8e-23 112.5 139 51.1
RcHm_v2.0_Chr6g0255531 Rosa chinensis HOM05D000049 ORTHO05D008785 2.8e-23 112.5 134 51.5
CAN.G1231.12 Capsicum annuum HOM05D000049 ORTHO05D008785 3.7e-23 112.1 105 57.1
CiPaw.05G010600 Carya illinoinensis HOM05D000049 ORTHO05D008785 3.7e-23 112.1 87 65.5
TAR381G1170 Trochodendron aralioides HOM05D000049 ORTHO05D008785 3.7e-23 112.1 126 53.2
arahy.Tifrunner.gnm1.ann1.MU25MQ Arachis hypogaea HOM05D000049 ORTHO05D008785 4.8e-23 111.7 97 58.8
CSS0023695 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 4.8e-23 111.7 106 60.4
QL11p033983 Quercus lobata HOM05D000049 ORTHO05D008785 4.8e-23 111.7 149 49.7
BcaNung03801 Brassica carinata HOM05D000049 ORTHO05D008785 6.3e-23 111.3 108 58.3
CANSAT25G0973 Cannabis sativa HOM05D000049 ORTHO05D008785 6.3e-23 111.3 105 58.1
CiPaw.06G170000 Carya illinoinensis HOM05D000049 ORTHO05D008785 6.3e-23 111.3 155 48.4
Migut.B00381 Erythranthe guttata HOM05D000049 ORTHO05D008785 6.3e-23 111.3 105 55.2
Atru.chr11.1081 Acer truncatum HOM05D000049 ORTHO05D008785 8.3e-23 110.9 147 46.9
ClCG02G006290 Citrullus lanatus HOM05D000049 ORTHO05D008785 8.3e-23 110.9 107 57.0
Potri.001G301100 Populus trichocarpa HOM05D000049 ORTHO05D008785 8.3e-23 110.9 120 49.2
C01p04640 Brassica napus HOM05D000049 ORTHO05D008785 1.1e-22 110.5 108 58.3
BolC1t00447H Brassica oleracea HOM05D000049 ORTHO05D008785 1.1e-22 110.5 108 58.3
Potri.009G096800 Populus trichocarpa HOM05D000049 ORTHO05D008785 1.4e-22 110.2 120 47.5
Sp7g31960 Schrenkiella parvula HOM05D000049 ORTHO05D008785 1.4e-22 110.2 107 57.9
CsaV3_7G008250 Cucumis sativus L. HOM05D000049 ORTHO05D008785 1.8e-22 109.8 128 52.3
Actinidia27967 Actinidia chinensis HOM05D000049 ORTHO05D008785 2.4e-22 109.4 96 58.3
A01p04250 Brassica napus HOM05D000049 ORTHO05D008785 2.4e-22 109.4 108 56.5
BraA01t00414Z Brassica rapa HOM05D000049 ORTHO05D008785 2.4e-22 109.4 108 56.5
Gohir.A03G186700 Gossypium hirsutum HOM05D000049 ORTHO05D008785 5.4e-22 108.2 148 49.3
Nitab4.5_0005392g0020 Nicotiana tabacum HOM05D000049 ORTHO05D008785 5.4e-22 108.2 82 68.3
THA.LOC104807247 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 5.4e-22 108.2 109 56.0
TWI31G0015 Tripterygium wilfordii HOM05D000049 ORTHO05D008785 5.4e-22 108.2 146 48.6
AUR62010281 Chenopodium quinoa HOM05D000049 ORTHO05D008785 7.0e-22 107.8 144 47.9
unitig_22.g6845 Utricularia gibba HOM05D000049 ORTHO05D008785 7.0e-22 107.8 79 65.8
CANSAT25G0620 Cannabis sativa HOM05D000049 ORTHO05D008785 9.1e-22 107.5 108 56.5
Medtr1g107490 Medicago truncatula HOM05D000049 ORTHO05D008785 9.1e-22 107.5 89 59.6
Sabra16G0189300 Salix brachista HOM05D000049 ORTHO05D008785 9.1e-22 107.5 115 50.4
Ah.01g018130 Amaranthus hybridus HOM05D000049 ORTHO05D008785 1.2e-21 107.1 145 49.0
arahy.Tifrunner.gnm1.ann1.KJA62A Arachis hypogaea HOM05D000049 ORTHO05D008785 1.6e-21 106.7 96 56.2
PSO170G1282 Papaver somniferum HOM05D000049 ORTHO05D008785 2.0e-21 106.3 111 57.7
Peaxi162Scf00016g02238 Petunia axillaris HOM05D000049 ORTHO05D008785 2.0e-21 106.3 123 52.8
Aa31LG2G16660 Aethionema arabicum HOM05D000049 ORTHO05D008785 3.8e-20 102.1 152 44.7
Zm00001eb048670 Zea mays HOM05D000049 ORTHO05D008785 3.8e-20 102.1 116 50.0
CSS0024818 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 5.5e-19 98.2 90 60.0
CSS0021501 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 7.2e-19 97.8 90 60.0
FAN24G0707 Fragaria x ananassa HOM05D000049 ORTHO05D008785 1.6e-18 96.7 125 49.6
FAN15G1433 Fragaria x ananassa HOM05D000049 ORTHO05D008785 4.7e-18 95.1 139 45.3
SEGI_21574 Sequoiadendron giganteum HOM05D000049 ORTHO05D008785 1.4e-17 93.6 77 57.1
MELO3C018482.2 Cucumis melo HOM05D000049 ORTHO05D000027 4.4e-16 88.6 86 55.8
Hund00143 Selenicereus undatus HOM05D000049 ORTHO05D008785 7.5e-16 87.8 75 62.7
TAR376G0829 Trochodendron aralioides HOM05D000049 ORTHO05D008785 4.9e-15 85.1 89 56.2
Os11g0621400 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 1.8e-14 83.2 86 53.5
Mapoly0006s0145 Marchantia polymorpha HOM05D000049 ORTHO05D008785 2.4e-14 82.8 95 54.7
vmacro19520 Vaccinium macrocarpon HOM05D000049 ORTHO05D008785 2.0e-13 79.7 74 55.4
Pp3c1_21810 Physcomitrium patens HOM05D000049 ORTHO05D008785 5.9e-13 78.2 134 41.0
SMO340G0196 Selaginella moellendorffii HOM05D000049 ORTHO05D008785 7.8e-13 77.8 83 45.8
Dinv15757 Davidia involucrata HOM05D000049 ORTHO05D008785 2.9e-12 75.9 71 53.5
ATR0691G295 Amborella trichopoda HOM05D000049 ORTHO05D008785 4.3e-11 72.0 55 67.3
AagrBONN_evm.TU.Sc2ySwM_117.2783 Anthoceros agrestis HOM05D000049 ORTHO05D008785 4.3e-11 72.0 78 48.7
Sabra09G0074400 Salix brachista HOM05D000049 ORTHO05D008785 1.2e-10 70.5 91 42.9
TAR628G1275 Trochodendron aralioides HOM05D000049 ORTHO05D008785 2.3e-09 66.2 87 48.3
SalBow6G4602 Salvia bowleyana HOM05D010989 ORTHO05D013112 7.5e-08 61.2 85 48.2
FAN27G0752 Fragaria x ananassa HOM05D000049 ORTHO05D000027 2.2e-07 59.7 100 43.0
Os10g0395200 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 8.3e-07 57.8 52 55.8
COL.COLO4_15744 Corchorus olitorius HOM05D001416 ORTHO05D002549 3.2e-06 55.8 34 79.4


User provided reference genes

Program Settings