Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_004698 Vanilla planifolia HOM05D005968 ORTHO05D007158 2.7e-70 268.5 128 100.0
MD15G1144700 Malus domestica HOM05D005968 ORTHO05D007158 3.2e-55 218.4 126 82.5
Atru.chr7.47_Atru.chr7.48 Acer truncatum HOM05D005968 ORTHO05D007158 4.2e-55 218.0 124 82.3
Psat0s2403g0360 Pisum sativum HOM05D005968 ORTHO05D007158 7.1e-55 217.2 127 81.9
MD02G1007400 Malus domestica HOM05D005968 ORTHO05D007158 9.3e-55 216.9 126 80.2
Medtr4g130840 Medicago truncatula HOM05D005968 ORTHO05D007158 1.2e-54 216.5 126 82.5
Os05g0279600 Oryza sativa ssp. japonica HOM05D005968 ORTHO05D007158 1.6e-54 216.1 126 77.0
TPR.G24874 Trifolium pratense HOM05D005968 ORTHO05D007158 2.1e-54 215.7 128 81.2
Potri.018G106700 Populus trichocarpa HOM05D005968 ORTHO05D007158 2.7e-54 215.3 125 80.0
Prupe.7G263000 Prunus persica HOM05D005968 ORTHO05D007158 2.7e-54 215.3 123 82.9
Lalb_Chr12g0198701 Lupinus albus HOM05D005968 ORTHO05D007158 3.5e-54 214.9 128 81.2
Potri.006G184300 Populus trichocarpa HOM05D005968 ORTHO05D007158 7.9e-54 213.8 125 79.2
Hma1.2p1_0222F.1_g093590 Hydrangea macrophylla HOM05D005968 ORTHO05D007158 1.0e-53 213.4 127 81.9
Glyma.02G204100 Glycine max HOM05D005968 ORTHO05D007158 1.3e-53 213.0 125 81.6
Sopen07g001730 Solanum pennellii HOM05D005968 ORTHO05D007158 1.3e-53 213.0 128 79.7
RcHm_v2.0_Chr2g0085621 Rosa chinensis HOM05D005968 ORTHO05D007158 1.8e-53 212.6 126 78.6
Solyc07g005620.2 Solanum lycopersicum HOM05D005968 ORTHO05D007158 1.8e-53 212.6 128 79.7
Zm00001eb086780 Zea mays HOM05D005968 ORTHO05D007158 1.8e-53 212.6 124 76.6
Zm00001eb420110 Zea mays HOM05D005968 ORTHO05D007158 1.8e-53 212.6 123 77.2
Duzib187G1838 Durio zibethinus HOM05D005968 ORTHO05D007158 2.3e-53 212.2 124 80.6
Ciclev10008980m.g Citrus clementina HOM05D005968 ORTHO05D007158 3.0e-53 211.8 124 79.0
Cc06_g14960 Coffea canephora HOM05D005968 ORTHO05D007158 3.0e-53 211.8 127 81.1
Dinv43246 Davidia involucrata HOM05D005968 ORTHO05D007158 3.0e-53 211.8 127 81.9
Lj4g0027447 Lotus japonicus HOM05D005968 ORTHO05D007158 3.0e-53 211.8 124 82.3
Thecc.09G030600 Theobroma cacao HOM05D005968 ORTHO05D007158 3.0e-53 211.8 125 80.0
Gohir.A08G251800 Gossypium hirsutum HOM05D005968 ORTHO05D007158 5.1e-53 211.1 125 81.6
HanXRQChr09g0245781 Helianthus annuus HOM05D005968 ORTHO05D007158 5.1e-53 211.1 127 80.3
Gohir.D08G273400 Gossypium hirsutum HOM05D005968 ORTHO05D007158 6.7e-53 210.7 125 81.6
Gorai.004G291800 Gossypium raimondii HOM05D005968 ORTHO05D007158 8.7e-53 210.3 124 82.3
Glyma.17G073700 Glycine max HOM05D005968 ORTHO05D007158 1.1e-52 209.9 125 80.8
GSVIVG01023605001 Vitis vinifera HOM05D005968 ORTHO05D007158 1.5e-52 209.5 127 80.3
Manes.14G143600 Manihot esculenta HOM05D005968 ORTHO05D007158 3.3e-52 208.4 125 80.8
PGR102G1528 Punica granatum HOM05D005968 ORTHO05D007158 3.3e-52 208.4 124 80.6
CiPaw.15G168400 Carya illinoinensis HOM05D005968 ORTHO05D007158 4.3e-52 208.0 125 79.2
CSS0021374 Camellia sinensis var. sinensis HOM05D005968 ORTHO05D007158 5.7e-52 207.6 123 82.1
PGSC0003DMG400011184 Solanum tuberosum HOM05D005968 ORTHO05D007158 7.4e-52 207.2 124 79.0
FAN23G3092 Fragaria x ananassa HOM05D005968 ORTHO05D007158 9.6e-52 206.8 125 78.4
Dinv42854 Davidia involucrata HOM05D005968 ORTHO05D007158 1.3e-51 206.5 123 82.1
FAN26G1763 Fragaria x ananassa HOM05D005968 ORTHO05D007158 1.3e-51 206.5 126 77.8
Dinv41378 Davidia involucrata HOM05D005968 ORTHO05D007158 1.6e-51 206.1 124 81.5
CANSAT11G2689 Cannabis sativa HOM05D005968 ORTHO05D007158 2.1e-51 205.7 124 78.2
ECA236G4418 Erigeron canadensis HOM05D005968 ORTHO05D007158 2.1e-51 205.7 124 79.0
Nn8g39893 Nelumbo nucifera HOM05D005968 ORTHO05D007158 2.1e-51 205.7 124 79.0
Migut.K00326 Erythranthe guttata HOM05D005968 ORTHO05D007158 2.8e-51 205.3 125 76.8
FvH4_1g00920 Fragaria vesca HOM05D005968 ORTHO05D007158 2.8e-51 205.3 123 79.7
DCAR_019393 Daucus carota HOM05D005968 ORTHO05D007158 4.8e-51 204.5 123 78.9
Eucgr.C02493 Eucalyptus grandis HOM05D005968 ORTHO05D007158 4.8e-51 204.5 124 78.2
PSO561G0082 Papaver somniferum HOM05D005968 ORTHO05D007158 4.8e-51 204.5 124 78.2
PSO111G0029 Papaver somniferum HOM05D005968 ORTHO05D007158 8.2e-51 203.8 124 78.2
Lj7A459G65 Lonicera japonica HOM05D005968 ORTHO05D007158 1.1e-50 203.4 127 79.5
QL02p093270 Quercus lobata HOM05D005968 ORTHO05D007158 1.1e-50 203.4 125 76.0
ClCG06G012410 Citrullus lanatus HOM05D005968 ORTHO05D007158 1.4e-50 203.0 126 77.0
Nn2g12378 Nelumbo nucifera HOM05D005968 ORTHO05D007158 1.4e-50 203.0 123 78.9
DCAR_017911 Daucus carota HOM05D005968 ORTHO05D007158 1.8e-50 202.6 127 76.4
TAR626G1902 Trochodendron aralioides HOM05D005968 ORTHO05D007158 3.1e-50 201.8 120 80.0
Oeu038141.1 Olea europaea HOM05D005968 ORTHO05D007158 9.0e-50 200.3 127 74.8
Sp7g28770 Schrenkiella parvula HOM05D005968 ORTHO05D007158 9.0e-50 200.3 124 75.0
arahy.Tifrunner.gnm1.ann1.D6JQQQ Arachis hypogaea HOM05D005968 ORTHO05D007158 1.2e-49 199.9 121 78.5
CiPaw.16G111000 Carya illinoinensis HOM05D005968 ORTHO05D007158 1.2e-49 199.9 119 79.0
SalBow1G6433 Salvia bowleyana HOM05D005968 ORTHO05D007158 1.2e-49 199.9 127 74.0
AT4G30900 Arabidopsis thaliana HOM05D005968 ORTHO05D007158 1.5e-49 199.5 124 74.2
CARHR238800 Cardamine hirsuta HOM05D005968 ORTHO05D007158 1.5e-49 199.5 123 74.8
Aqoxy2G01962_Aqoxy2G01963 Aquilegia oxysepala HOM05D005968 ORTHO05D007158 2.0e-49 199.1 127 76.4
MELO3C010224.2 Cucumis melo HOM05D005968 ORTHO05D007158 2.0e-49 199.1 126 76.2
AL7G21190 Arabidopsis lyrata HOM05D005968 ORTHO05D007158 3.4e-49 198.4 124 73.4
THA.LOC104803560 Tarenaya hassleriana HOM05D005968 ORTHO05D007158 5.8e-49 197.6 124 75.8
Carub.0007s0964 Capsella rubella HOM05D005968 ORTHO05D007158 7.6e-49 197.2 124 74.2
Thhalv10025727m.g Eutrema salsugineum HOM05D005968 ORTHO05D007158 2.2e-48 195.7 124 74.2
Sed0018428 Sechium edule HOM05D005968 ORTHO05D007158 2.2e-48 195.7 124 76.6
Lsat_1_v5_gn_8_63401 Lactuca sativa HOM05D005968 ORTHO05D007158 5.0e-48 194.5 118 78.8
Peaxi162Scf00401g00718 Petunia axillaris HOM05D005968 ORTHO05D007158 5.0e-48 194.5 117 78.6
VMungo1215G2113 Vigna mungo HOM05D005968 ORTHO05D007158 5.0e-48 194.5 117 77.8
Aa31LG2G19470 Aethionema arabicum HOM05D005968 ORTHO05D007158 1.1e-47 193.4 118 76.3
Cfa020826 Carpinus fangiana HOM05D002374 ORTHO05D003594 4.2e-47 191.4 107 80.4
Ca_21128_v3 Cicer arietinum L. HOM05D005968 ORTHO05D007158 5.5e-47 191.0 121 76.9
Sabra18G0090900 Salix brachista HOM05D005968 ORTHO05D007158 2.1e-46 189.1 171 57.9
EL10Ac8g18668 Beta vulgaris HOM05D005968 ORTHO05D007158 2.7e-46 188.7 124 72.6
C01p08040 Brassica napus HOM05D005968 ORTHO05D007158 3.5e-46 188.3 118 75.4
BolC1t00793H Brassica oleracea HOM05D005968 ORTHO05D007158 6.1e-46 187.6 118 75.4
BcaC09g51877 Brassica carinata HOM05D005968 ORTHO05D007158 1.3e-45 186.4 118 74.6
A01p07280 Brassica napus HOM05D005968 ORTHO05D007158 1.3e-45 186.4 118 74.6
BraA01t00677Z Brassica rapa HOM05D005968 ORTHO05D007158 1.3e-45 186.4 118 74.6
Sabra06G0140100 Salix brachista HOM05D005968 ORTHO05D007158 3.9e-45 184.9 201 50.7
BcaNung03430 Brassica carinata HOM05D005968 ORTHO05D007158 1.5e-44 183.0 125 69.6
Cpa.g.sc46.156 Carica papaya HOM05D005968 ORTHO05D007158 7.4e-44 180.6 147 63.9
CiPaw.15G168700 Carya illinoinensis HOM05D005968 ORTHO05D007158 1.2e-41 173.3 118 72.0
SEGI_19747 Sequoiadendron giganteum HOM05D005968 ORTHO05D007158 5.9e-41 171.0 126 63.5
Mapoly0088s0077 Marchantia polymorpha HOM05D005968 ORTHO05D007158 2.7e-38 162.2 122 58.2
AagrBONN_evm.TU.Sc2ySwM_362.192 Anthoceros agrestis HOM05D005968 ORTHO05D007158 3.0e-37 158.7 114 61.4
TWI34G0179 Tripterygium wilfordii HOM05D005968 ORTHO05D007158 7.7e-33 144.1 91 73.6
ATR0739G020 Amborella trichopoda HOM05D005968 ORTHO05D007158 1.7e-32 142.9 90 74.4
Phvul.003G156000 Phaseolus vulgaris HOM05D005968 ORTHO05D007158 3.8e-32 141.7 87 77.0
COL.COLO4_18810 Corchorus olitorius HOM05D000238 ORTHO05D007158 1.4e-31 139.8 88 73.9
Lsat_1_v5_gn_4_18741 Lactuca sativa HOM05D005968 ORTHO05D007158 2.5e-31 139.0 82 78.0
CDE04G1812 Ceratophyllum demersum HOM05D005968 ORTHO05D007158 4.7e-30 134.8 90 68.9
CsaV3_1G028970 Cucumis sativus L. HOM05D005968 ORTHO05D007158 1.4e-29 133.3 91 69.2
Actinidia38673 Actinidia chinensis HOM05D005968 ORTHO05D007158 9.7e-28 127.1 83 73.5
unitig_52.g17565 Utricularia gibba HOM05D005968 ORTHO05D007158 4.8e-27 124.8 114 54.4
TAR636G0142 Trochodendron aralioides HOM05D002374 ORTHO05D003594 2.4e-26 122.5 77 74.0
AUR62029822 Chenopodium quinoa HOM05D005968 ORTHO05D007158 3.8e-24 115.2 67 76.1
Eucgr.C02541 Eucalyptus grandis HOM05D005968 ORTHO05D007158 2.8e-19 99.0 81 66.7
AUR62006466 Chenopodium quinoa HOM05D005968 ORTHO05D007158 1.1e-18 97.1 53 79.2
Lsat_1_v5_gn_7_66900 Lactuca sativa HOM05D005968 ORTHO05D007158 3.1e-18 95.5 81 60.5
arahy.Tifrunner.gnm1.ann1.4WLG0J Arachis hypogaea HOM05D005968 ORTHO05D007158 2.0e-12 76.3 62 61.3
Nitab4.5_0003623g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 1.7e-11 73.2 50 72.0
arahy.Tifrunner.gnm1.ann1.QXT71M Arachis hypogaea HOM05D005968 ORTHO05D007158 2.2e-11 72.8 47 72.3
arahy.Tifrunner.gnm1.ann1.VCSM30 Arachis hypogaea HOM05D005968 ORTHO05D007158 8.3e-11 70.9 48 70.8
SGA_v2.0_scaffold347G49545 Striga asiatica HOM05D005968 ORTHO05D007158 8.3e-11 70.9 49 69.4
Haze_19213 Corylus avellana HOM05D000344 ORTHO05D005296 1.4e-10 70.1 34 91.2
arahy.Tifrunner.gnm1.ann1.HGKJ8P Arachis hypogaea HOM05D005968 ORTHO05D007158 2.5e-07 59.3 41 68.3


User provided reference genes

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