Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_004697 Vanilla planifolia HOM05D005968 ORTHO05D007158 6.8e-59 230.3 107 100.0
TAR636G1721 Trochodendron aralioides HOM05D005968 ORTHO05D007158 9.5e-53 209.9 106 85.8
CAN.G160.61 Capsicum annuum HOM05D005968 ORTHO05D007158 5.2e-51 204.1 105 85.7
Dinv42854 Davidia involucrata HOM05D005968 ORTHO05D007158 6.8e-51 203.8 101 88.1
Lalb_Chr12g0198711 Lupinus albus HOM05D005968 ORTHO05D007158 6.8e-51 203.8 102 86.3
Nn8g39893 Nelumbo nucifera HOM05D005968 ORTHO05D007158 6.8e-51 203.8 101 88.1
Dinv41378 Davidia involucrata HOM05D005968 ORTHO05D007158 8.9e-51 203.4 101 88.1
Aqoxy2G01962_Aqoxy2G01963 Aquilegia oxysepala HOM05D005968 ORTHO05D007158 1.2e-50 203.0 107 84.1
Cfa020826 Carpinus fangiana HOM05D002374 ORTHO05D003594 1.2e-50 203.0 102 86.3
Hma1.2p1_0222F.1_g093590 Hydrangea macrophylla HOM05D005968 ORTHO05D007158 1.2e-50 203.0 104 85.6
SalBow1G6433 Salvia bowleyana HOM05D005968 ORTHO05D007158 1.5e-50 202.6 102 86.3
Glyma.17G073700 Glycine max HOM05D005968 ORTHO05D007158 2.0e-50 202.2 102 85.3
Migut.K00326 Erythranthe guttata HOM05D005968 ORTHO05D007158 2.6e-50 201.8 104 84.6
arahy.Tifrunner.gnm1.ann1.D6JQQQ Arachis hypogaea HOM05D005968 ORTHO05D007158 3.4e-50 201.4 102 85.3
Haze_19205 Corylus avellana HOM05D005968 ORTHO05D007158 3.4e-50 201.4 102 85.3
ATR0739G020 Amborella trichopoda HOM05D005968 ORTHO05D007158 4.4e-50 201.1 101 87.1
Ca_21128_v3 Cicer arietinum L. HOM05D005968 ORTHO05D007158 5.8e-50 200.7 102 86.3
Nitab4.5_0003623g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 5.8e-50 200.7 105 83.8
Glyma.02G204100 Glycine max HOM05D005968 ORTHO05D007158 7.5e-50 200.3 102 84.3
MSTRG.26272 Avicennia marina HOM05D005968 ORTHO05D007158 9.9e-50 199.9 101 85.1
ECA236G4418 Erigeron canadensis HOM05D005968 ORTHO05D007158 9.9e-50 199.9 104 84.6
Atru.chr7.47_Atru.chr7.48 Acer truncatum HOM05D005968 ORTHO05D007158 1.3e-49 199.5 101 85.1
Peaxi162Scf00401g00718 Petunia axillaris HOM05D005968 ORTHO05D007158 1.3e-49 199.5 105 83.8
vmacro06082 Vaccinium macrocarpon HOM05D005968 ORTHO05D007158 1.7e-49 199.1 101 85.1
CSS0021374 Camellia sinensis var. sinensis HOM05D005968 ORTHO05D007158 2.2e-49 198.7 101 85.1
Lj4g0027447 Lotus japonicus HOM05D005968 ORTHO05D007158 2.2e-49 198.7 102 83.3
Medtr4g130830 Medicago truncatula HOM05D005968 ORTHO05D007158 2.2e-49 198.7 102 85.3
Thecc.09G030600 Theobroma cacao HOM05D005968 ORTHO05D007158 2.2e-49 198.7 101 84.2
TPR.G24830 Trifolium pratense HOM05D005968 ORTHO05D007158 2.2e-49 198.7 102 85.3
GSVIVG01023606001 Vitis vinifera HOM05D005968 ORTHO05D007158 2.2e-49 198.7 101 84.2
Cpa.g.sc46.157 Carica papaya HOM05D005968 ORTHO05D007158 2.9e-49 198.4 101 86.1
Ciclev10008980m.g Citrus clementina HOM05D005968 ORTHO05D007158 2.9e-49 198.4 101 84.2
Gohir.D08G273400 Gossypium hirsutum HOM05D005968 ORTHO05D007158 3.7e-49 198.0 101 84.2
Gorai.004G291800 Gossypium raimondii HOM05D005968 ORTHO05D007158 3.7e-49 198.0 101 84.2
Nitab4.5_0009876g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 3.7e-49 198.0 105 81.9
SGA_v2.0_scaffold347G49545 Striga asiatica HOM05D005968 ORTHO05D007158 4.9e-49 197.6 102 84.3
Actinidia38673 Actinidia chinensis HOM05D005968 ORTHO05D007158 6.4e-49 197.2 101 85.1
CiPaw.16G111000 Carya illinoinensis HOM05D005968 ORTHO05D007158 6.4e-49 197.2 101 84.2
Lsat_1_v5_gn_8_63401 Lactuca sativa HOM05D005968 ORTHO05D007158 6.4e-49 197.2 104 83.7
Lj7A459G65 Lonicera japonica HOM05D005968 ORTHO05D007158 6.4e-49 197.2 101 85.1
Oeu038140.1 Olea europaea HOM05D005968 ORTHO05D007158 6.4e-49 197.2 101 84.2
Sopen07g001720 Solanum pennellii HOM05D005968 ORTHO05D007158 6.4e-49 197.2 105 81.9
CiPaw.15G168400 Carya illinoinensis HOM05D005968 ORTHO05D007158 8.3e-49 196.8 101 84.2
Prupe.7G263000 Prunus persica HOM05D005968 ORTHO05D007158 8.3e-49 196.8 101 83.2
QL02p093270 Quercus lobata HOM05D005968 ORTHO05D007158 8.3e-49 196.8 101 84.2
Manes.14G143600 Manihot esculenta HOM05D005968 ORTHO05D007158 1.1e-48 196.4 106 79.2
Nn2g12378 Nelumbo nucifera HOM05D005968 ORTHO05D007158 1.1e-48 196.4 100 85.0
RhsimUnG0158300 Rhododendron simsii HOM05D005968 ORTHO05D001263 1.1e-48 196.4 103 83.5
TAR626G1902 Trochodendron aralioides HOM05D005968 ORTHO05D007158 1.1e-48 196.4 101 84.2
VMungo1215G2113 Vigna mungo HOM05D005968 ORTHO05D007158 1.1e-48 196.4 102 82.4
EL10Ac8g18668 Beta vulgaris HOM05D005968 ORTHO05D007158 1.9e-48 195.7 101 86.1
Sed0018428 Sechium edule HOM05D005968 ORTHO05D007158 1.9e-48 195.7 107 81.3
THA.LOC104803560 Tarenaya hassleriana HOM05D005968 ORTHO05D007158 1.9e-48 195.7 101 86.1
BcaNung03430 Brassica carinata HOM05D005968 ORTHO05D007158 2.4e-48 195.3 104 81.7
CsaV3_1G028970 Cucumis sativus L. HOM05D005968 ORTHO05D007158 2.4e-48 195.3 107 81.3
Duzib187G1838 Durio zibethinus HOM05D005968 ORTHO05D007158 2.4e-48 195.3 101 82.2
HanXRQChr09g0245781 Helianthus annuus HOM05D005968 ORTHO05D007158 2.4e-48 195.3 101 85.1
PGSC0003DMG400011184 Solanum tuberosum HOM05D005968 ORTHO05D007158 2.4e-48 195.3 105 81.0
MD02G1007400 Malus domestica HOM05D005968 ORTHO05D007158 3.2e-48 194.9 101 82.2
PSO111G0029 Papaver somniferum HOM05D005968 ORTHO05D007158 4.1e-48 194.5 104 81.7
PSO561G0082 Papaver somniferum HOM05D005968 ORTHO05D007158 4.1e-48 194.5 104 81.7
Cc06_g14950 Coffea canephora HOM05D005968 ORTHO05D007158 5.4e-48 194.1 101 84.2
MD15G1144700 Malus domestica HOM05D005968 ORTHO05D007158 5.4e-48 194.1 101 82.2
Sc17g0006690 Simmondsia chinensis HOM05D005968 ORTHO05D007158 5.4e-48 194.1 101 83.2
AT4G30900 Arabidopsis thaliana HOM05D005968 ORTHO05D007158 7.1e-48 193.7 104 81.7
Zm00001eb086780 Zea mays HOM05D005968 ORTHO05D007158 7.1e-48 193.7 102 82.4
AL7G21190 Arabidopsis lyrata HOM05D005968 ORTHO05D007158 9.2e-48 193.4 104 80.8
BcaC09g51877 Brassica carinata HOM05D005968 ORTHO05D007158 9.2e-48 193.4 104 81.7
A01p07280 Brassica napus HOM05D005968 ORTHO05D007158 9.2e-48 193.4 104 81.7
C01p08040 Brassica napus HOM05D005968 ORTHO05D007158 9.2e-48 193.4 104 81.7
BolC1t00793H Brassica oleracea HOM05D005968 ORTHO05D007158 9.2e-48 193.4 104 81.7
BraA01t00677Z Brassica rapa HOM05D005968 ORTHO05D007158 9.2e-48 193.4 104 81.7
Sp7g28770 Schrenkiella parvula HOM05D005968 ORTHO05D007158 9.2e-48 193.4 104 81.7
CANSAT11G2689 Cannabis sativa HOM05D005968 ORTHO05D007158 1.2e-47 193.0 101 82.2
TWI34G0179 Tripterygium wilfordii HOM05D005968 ORTHO05D007158 1.2e-47 193.0 107 80.4
Carub.0007s0964 Capsella rubella HOM05D005968 ORTHO05D007158 2.1e-47 192.2 104 81.7
AUR62029822 Chenopodium quinoa HOM05D005968 ORTHO05D007158 2.1e-47 192.2 101 84.2
Gohir.A08G251800 Gossypium hirsutum HOM05D005968 ORTHO05D007158 2.1e-47 192.2 101 82.2
Phvul.003G156000 Phaseolus vulgaris HOM05D005968 ORTHO05D007158 2.7e-47 191.8 102 80.4
Zm00001eb420110 Zea mays HOM05D005968 ORTHO05D007158 2.7e-47 191.8 102 81.4
Thhalv10025727m.g Eutrema salsugineum HOM05D005968 ORTHO05D007158 3.5e-47 191.4 103 82.5
AUR62006466 Chenopodium quinoa HOM05D005968 ORTHO05D007158 6.0e-47 190.7 101 83.2
Potri.006G184300 Populus trichocarpa HOM05D005968 ORTHO05D007158 6.0e-47 190.7 104 80.8
COL.COLO4_18810 Corchorus olitorius HOM05D000238 ORTHO05D007158 7.8e-47 190.3 98 81.6
unitig_52.g17565 Utricularia gibba HOM05D005968 ORTHO05D007158 7.8e-47 190.3 101 80.2
DCAR_019393 Daucus carota HOM05D005968 ORTHO05D007158 1.0e-46 189.9 101 83.2
Psat0s2403g0360 Pisum sativum HOM05D005968 ORTHO05D007158 1.3e-46 189.5 97 85.6
Eucgr.C02493 Eucalyptus grandis HOM05D005968 ORTHO05D007158 1.7e-46 189.1 101 79.2
Eucgr.C02540 Eucalyptus grandis HOM05D005968 ORTHO05D007158 1.7e-46 189.1 101 79.2
CARHR238800 Cardamine hirsuta HOM05D005968 ORTHO05D007158 2.3e-46 188.7 104 80.8
Sabra06G0140100 Salix brachista HOM05D005968 ORTHO05D007158 2.3e-46 188.7 101 81.2
DCAR_017911 Daucus carota HOM05D005968 ORTHO05D007158 5.1e-46 187.6 102 81.4
RcHm_v2.0_Chr2g0085611 Rosa chinensis HOM05D005968 ORTHO05D007158 6.6e-46 187.2 101 78.2
FAN26G1763 Fragaria x ananassa HOM05D005968 ORTHO05D007158 3.3e-45 184.9 101 79.2
Lsat_1_v5_gn_4_18721 Lactuca sativa HOM05D005968 ORTHO05D007158 5.6e-45 184.1 104 77.9
Potri.018G106700 Populus trichocarpa HOM05D005968 ORTHO05D007158 5.6e-45 184.1 101 78.2
FAN23G3092 Fragaria x ananassa HOM05D005968 ORTHO05D007158 7.3e-45 183.7 101 78.2
Sabra18G0090900 Salix brachista HOM05D005968 ORTHO05D007158 7.3e-45 183.7 104 76.9
FvH4_1g00920 Fragaria vesca HOM05D005968 ORTHO05D007158 1.2e-44 183.0 101 78.2
FAN28G0447 Fragaria x ananassa HOM05D005968 ORTHO05D007158 1.2e-44 183.0 101 78.2
SEGI_19747 Sequoiadendron giganteum HOM05D005968 ORTHO05D007158 1.2e-44 183.0 101 78.2
Lsat_1_v5_gn_7_66900 Lactuca sativa HOM05D005968 ORTHO05D007158 6.2e-44 180.6 104 76.0
Mapoly0088s0077 Marchantia polymorpha HOM05D005968 ORTHO05D007158 2.5e-29 132.1 101 55.4
PGR102G1528 Punica granatum HOM05D005968 ORTHO05D007158 2.0e-26 122.5 61 83.6
arahy.Tifrunner.gnm1.ann1.4WLG0J Arachis hypogaea HOM05D005968 ORTHO05D007158 1.1e-21 106.7 60 71.7
SHI23672 Sapria himalayana HOM05D005968 ORTHO05D007158 6.4e-17 90.9 62 67.7
AagrBONN_evm.TU.Sc2ySwM_362.192 Anthoceros agrestis HOM05D005968 ORTHO05D007158 2.7e-15 85.5 60 55.0


User provided reference genes

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