Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_004599 Vanilla planifolia HOM05D000434 ORTHO05D005992 5.2e-195 684.1 321 100.0
GSVIVG01007623001 Vitis vinifera HOM05D000434 ORTHO05D005992 6.2e-140 501.1 321 70.4
Sc04g0001380 Simmondsia chinensis HOM05D000434 ORTHO05D005992 1.2e-138 496.9 314 71.0
PGR083G1106 Punica granatum HOM05D000434 ORTHO05D005992 1.7e-137 493.0 320 69.7
Rhsim12G0168500 Rhododendron simsii HOM05D000434 ORTHO05D005992 1.7e-137 493.0 321 69.8
MBI06_g22722_MAGBIO Magnolia biondii HOM05D000434 ORTHO05D005992 2.2e-137 492.7 306 72.9
Aqoxy5G03716 Aquilegia oxysepala HOM05D000434 ORTHO05D005992 1.1e-136 490.3 318 69.8
Ciclev10021198m.g Citrus clementina HOM05D000434 ORTHO05D005992 1.9e-136 489.6 321 68.5
Prupe.5G164400 Prunus persica HOM05D000434 ORTHO05D005992 2.4e-136 489.2 320 67.8
Haze_07598 Corylus avellana HOM05D000434 ORTHO05D005992 5.4e-136 488.0 320 67.8
MD14G1170200 Malus domestica HOM05D000434 ORTHO05D005992 1.2e-135 486.9 320 68.4
TAR622G0355 Trochodendron aralioides HOM05D000434 ORTHO05D005992 1.6e-135 486.5 318 69.2
SEGI_02641 Sequoiadendron giganteum HOM05D000434 ORTHO05D005992 4.6e-135 485.0 318 69.2
RcHm_v2.0_Chr7g0192361 Rosa chinensis HOM05D000434 ORTHO05D005992 6.0e-135 484.6 318 69.5
Cfa019231 Carpinus fangiana HOM05D000434 ORTHO05D005992 1.7e-134 483.0 318 67.3
FvH4_5g06420 Fragaria vesca HOM05D000434 ORTHO05D005992 1.7e-134 483.0 320 68.1
FAN18G2656 Fragaria x ananassa HOM05D000434 ORTHO05D005992 1.7e-134 483.0 320 68.1
CSS0032276 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 2.3e-134 482.6 319 68.7
Nn4g22577 Nelumbo nucifera HOM05D000434 ORTHO05D005992 2.3e-134 482.6 306 69.9
MSTRG.4348 Avicennia marina HOM05D000434 ORTHO05D005992 3.0e-134 482.3 315 67.6
EL10Ac7g17989 Beta vulgaris HOM05D000434 ORTHO05D005992 3.0e-134 482.3 314 68.8
FAN08G0399 Fragaria x ananassa HOM05D000434 ORTHO05D005992 3.9e-134 481.9 320 68.4
FAN04G1602 Fragaria x ananassa HOM05D000434 ORTHO05D005992 5.1e-134 481.5 320 68.1
Glyma.05G042300 Glycine max HOM05D000434 ORTHO05D005992 5.1e-134 481.5 320 67.5
Glyma.17G125000 Glycine max HOM05D000434 ORTHO05D005992 8.7e-134 480.7 320 67.5
AUR62001199 Chenopodium quinoa HOM05D000434 ORTHO05D005992 1.9e-133 479.6 314 69.1
AUR62022129 Chenopodium quinoa HOM05D000434 ORTHO05D005992 1.9e-133 479.6 314 69.1
ATR0122G026 Amborella trichopoda HOM05D000434 ORTHO05D005992 2.5e-133 479.2 319 67.4
Lalb_Chr08g0236831 Lupinus albus HOM05D000434 ORTHO05D005992 3.3e-133 478.8 320 66.9
CiPaw.12G032200 Carya illinoinensis HOM05D000434 ORTHO05D005992 4.3e-133 478.4 320 66.9
Glyma.06G176500 Glycine max HOM05D000434 ORTHO05D005992 1.3e-132 476.9 310 70.3
QL10p006660 Quercus lobata HOM05D000434 ORTHO05D005992 1.6e-132 476.5 312 68.9
Lj4g0020673 Lotus japonicus HOM05D000434 ORTHO05D005992 2.1e-132 476.1 321 67.6
CANSAT80G1313 Cannabis sativa HOM05D000434 ORTHO05D005992 2.8e-132 475.7 321 66.7
Oeu036498.1 Olea europaea HOM05D000434 ORTHO05D005992 3.6e-132 475.3 318 68.6
Zm00001eb306980 Zea mays HOM05D000434 ORTHO05D005992 3.6e-132 475.3 318 67.0
Phvul.009G172900 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 4.8e-132 474.9 321 69.2
TPR.G37491 Trifolium pratense HOM05D000434 ORTHO05D007220 8.1e-132 474.2 318 66.4
ClCG03G003070 Citrullus lanatus HOM05D000434 ORTHO05D005992 1.4e-131 473.4 320 66.9
Duzib068G0672 Durio zibethinus HOM05D000434 ORTHO05D005992 4.0e-131 471.9 322 66.8
Eucgr.B00212 Eucalyptus grandis HOM05D000434 ORTHO05D005992 9.0e-131 470.7 318 67.0
Glyma.06G176400 Glycine max HOM05D000434 ORTHO05D005992 1.2e-130 470.3 321 67.3
Ah.08g218690 Amaranthus hybridus HOM05D000434 ORTHO05D007220 1.5e-130 469.9 314 68.2
MELO3C002306.2 Cucumis melo HOM05D000434 ORTHO05D005992 1.5e-130 469.9 320 66.2
DCAR_007452 Daucus carota HOM05D000434 ORTHO05D007220 1.5e-130 469.9 326 66.3
Lj5P131T21 Lonicera japonica HOM05D000434 ORTHO05D005992 1.5e-130 469.9 319 66.1
Gohir.A03G074900 Gossypium hirsutum HOM05D000434 ORTHO05D005992 2.0e-130 469.5 321 66.4
Ca_19422_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 4.5e-130 468.4 314 67.2
CsaV3_1G008920 Cucumis sativus L. HOM05D000434 ORTHO05D005992 4.5e-130 468.4 320 66.2
CAN.G126.46 Capsicum annuum HOM05D000434 ORTHO05D005992 5.8e-130 468.0 315 67.3
Phvul.009G172700 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 7.6e-130 467.6 310 69.4
CANSAT80G2029 Cannabis sativa HOM05D000434 ORTHO05D005992 1.3e-129 466.8 307 68.4
Lalb_Chr07g0183021 Lupinus albus HOM05D000434 ORTHO05D005992 1.3e-129 466.8 320 65.0
Potri.012G089400 Populus trichocarpa HOM05D000434 ORTHO05D005992 1.3e-129 466.8 321 66.7
VMungo1309G2109 Vigna mungo HOM05D000434 ORTHO05D005992 1.7e-129 466.5 321 67.9
Ca_16123_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 2.2e-129 466.1 307 69.4
ECA232G2851 Erigeron canadensis HOM05D000434 ORTHO05D005992 2.2e-129 466.1 306 67.6
COL.COLO4_21936 Corchorus olitorius HOM05D000434 ORTHO05D005992 2.9e-129 465.7 318 67.3
TPR.G35602 Trifolium pratense HOM05D000434 ORTHO05D005992 2.9e-129 465.7 308 68.8
TWI39G0022 Tripterygium wilfordii HOM05D000434 ORTHO05D005992 2.9e-129 465.7 318 66.0
Nitab4.5_0002522g0080 Nicotiana tabacum HOM05D000434 ORTHO05D005992 4.9e-129 464.9 315 66.7
PGSC0003DMG400018193 Solanum tuberosum HOM05D000434 ORTHO05D005992 4.9e-129 464.9 315 67.3
COL.COLO4_20637 Corchorus olitorius HOM05D000434 ORTHO05D005992 6.4e-129 464.5 321 66.7
Manes.06G111500 Manihot esculenta HOM05D000434 ORTHO05D005992 8.4e-129 464.2 321 65.4
Thecc.03G116300 Theobroma cacao HOM05D000434 ORTHO05D005992 8.4e-129 464.2 323 66.3
VMungo1309G2813 Vigna mungo HOM05D000434 ORTHO05D005992 8.4e-129 464.2 314 67.2
LjContig00127g0004723 Lotus japonicus HOM05D000434 ORTHO05D005992 1.1e-128 463.8 310 67.4
Nitab4.5_0008037g0030 Nicotiana tabacum HOM05D000434 ORTHO05D005992 1.4e-128 463.4 315 66.3
Peaxi162Scf00801g00033 Petunia axillaris HOM05D000434 ORTHO05D005992 1.4e-128 463.4 319 66.8
Cc04_g11350 Coffea canephora HOM05D000434 ORTHO05D005992 1.9e-128 463.0 318 66.4
Psat4g061720 Pisum sativum HOM05D000434 ORTHO05D005992 1.9e-128 463.0 306 66.3
Sopen03g031180 Solanum pennellii HOM05D000434 ORTHO05D005992 1.9e-128 463.0 315 67.3
Solyc03g112080.1 Solanum lycopersicum HOM05D000434 ORTHO05D005992 2.4e-128 462.6 315 67.3
VMungo1309G2156 Vigna mungo HOM05D000434 ORTHO05D005992 2.4e-128 462.6 311 70.1
Cpa.g.sc968.1 Carica papaya HOM05D000434 ORTHO05D005992 3.2e-128 462.2 318 65.1
Medtr4g104690 Medicago truncatula HOM05D000434 ORTHO05D005992 3.2e-128 462.2 306 67.3
Os07g0688000 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 3.2e-128 462.2 321 64.2
Peaxi162Scf00089g01220 Petunia axillaris HOM05D000434 ORTHO05D005992 3.2e-128 462.2 312 67.0
Phvul.009G172800 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 3.2e-128 462.2 310 68.7
Lalb_Chr13g0297571 Lupinus albus HOM05D000434 ORTHO05D005992 4.2e-128 461.8 308 66.9
VMungo1215G0774 Vigna mungo HOM05D000434 ORTHO05D005992 4.2e-128 461.8 318 66.0
Medtr3g076590 Medicago truncatula HOM05D000434 ORTHO05D005992 1.6e-127 459.9 313 67.1
Sed0014341 Sechium edule HOM05D000434 ORTHO05D005992 1.6e-127 459.9 320 65.0
SalBow5G1452 Salvia bowleyana HOM05D000434 ORTHO05D005992 2.7e-127 459.1 313 66.1
SGA_v2.0_scaffold114G31805 Striga asiatica HOM05D000434 ORTHO05D005992 3.5e-127 458.8 316 66.1
arahy.Tifrunner.gnm1.ann1.D0ANT3 Arachis hypogaea HOM05D000434 ORTHO05D005992 4.6e-127 458.4 319 65.8
SalBow5G5274 Salvia bowleyana HOM05D000434 ORTHO05D005992 6.0e-127 458.0 310 66.5
arahy.Tifrunner.gnm1.ann1.Z1M7DP Arachis hypogaea HOM05D000434 ORTHO05D005992 7.9e-127 457.6 319 65.5
Phvul.003G206000 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 7.9e-127 457.6 311 66.9
SGA_v2.0_scaffold90G27827 Striga asiatica HOM05D000434 ORTHO05D005992 1.0e-126 457.2 311 66.2
THA.LOC104824991 Tarenaya hassleriana HOM05D000434 ORTHO05D005992 1.0e-126 457.2 301 66.8
HanXRQChr09g0272611 Helianthus annuus HOM05D000434 ORTHO05D005992 1.8e-126 456.4 306 67.6
Migut.O00171 Erythranthe guttata HOM05D000434 ORTHO05D005992 6.7e-126 454.5 318 63.8
Psat5g116720 Pisum sativum HOM05D000434 ORTHO05D005992 1.5e-125 453.4 309 67.3
Migut.D02023 Erythranthe guttata HOM05D000434 ORTHO05D005992 1.9e-125 453.0 315 65.7
Gorai.008G202000 Gossypium raimondii HOM05D000434 ORTHO05D005992 2.5e-125 452.6 322 64.6
Sabra12G0064400 Salix brachista HOM05D000434 ORTHO05D005992 7.4e-125 451.1 313 64.9
Lsat_1_v5_gn_4_79260 Lactuca sativa HOM05D000434 ORTHO05D005992 3.7e-124 448.7 305 65.2
Nitab4.5_0001243g0040 Nicotiana tabacum HOM05D000434 ORTHO05D005992 3.7e-124 448.7 318 64.5
Nitab4.5_0000025g0390 Nicotiana tabacum HOM05D000434 ORTHO05D005992 6.2e-124 448.0 318 64.2
CDE09G0062 Ceratophyllum demersum HOM05D000434 ORTHO05D005992 1.4e-123 446.8 304 64.8
Gohir.A12G185500 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.4e-123 446.8 308 65.9
Oeu044591.1 Olea europaea HOM05D000434 ORTHO05D005992 3.1e-123 445.7 313 65.2
SalBow5G0725 Salvia bowleyana HOM05D000434 ORTHO05D005992 2.6e-122 442.6 310 65.8
SalBow5G4047 Salvia bowleyana HOM05D000434 ORTHO05D005992 9.9e-122 440.7 295 66.4
Zm00001eb176220 Zea mays HOM05D000434 ORTHO05D005992 9.9e-122 440.7 318 63.8
CARHR232100 Cardamine hirsuta HOM05D000434 ORTHO05D005992 3.8e-121 438.7 303 64.7
Aa31LG7G11140 Aethionema arabicum HOM05D000434 ORTHO05D005992 4.9e-121 438.3 303 64.4
Carub.0007s1633 Capsella rubella HOM05D000434 ORTHO05D005992 1.4e-120 436.8 303 65.0
A01p16060 Brassica napus HOM05D000434 ORTHO05D005992 1.9e-120 436.4 321 62.6
Atru.chr9.2595 Acer truncatum HOM05D000434 ORTHO05D005992 2.5e-120 436.0 321 62.3
BraA01t01541Z Brassica rapa HOM05D000434 ORTHO05D001445 2.5e-120 436.0 321 62.6
AL7G28460 Arabidopsis lyrata HOM05D000434 ORTHO05D005992 3.2e-120 435.6 303 63.7
AT4G24730 Arabidopsis thaliana HOM05D000434 ORTHO05D005992 4.2e-120 435.3 303 64.4
Sp7g22710 Schrenkiella parvula HOM05D000434 ORTHO05D005992 4.2e-120 435.3 309 62.5
Aa31LG7G11150 Aethionema arabicum HOM05D000434 ORTHO05D005992 5.5e-120 434.9 302 62.9
Gohir.D12G188284 Gossypium hirsutum HOM05D000434 ORTHO05D005992 5.5e-120 434.9 309 64.7
Os08g0557200 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 9.3e-120 434.1 312 63.5
Thhalv10025788m.g Eutrema salsugineum HOM05D000434 ORTHO05D005992 1.6e-119 433.3 309 61.8
C01p20050 Brassica napus HOM05D000434 ORTHO05D001445 4.6e-119 431.8 321 62.0
BolC1t01932H Brassica oleracea HOM05D000434 ORTHO05D001445 6.7e-118 427.9 321 61.4
Gorai.003G107100 Gossypium raimondii HOM05D000434 ORTHO05D005992 1.1e-117 427.2 288 68.1
Gohir.D03G101700 Gossypium hirsutum HOM05D000434 ORTHO05D005992 3.3e-117 425.6 288 68.1
Pp3c23_9280 Physcomitrium patens HOM05D000434 ORTHO05D005992 2.6e-114 416.0 311 58.5
PSO754G0021 Papaver somniferum HOM05D000434 ORTHO05D005992 3.8e-113 412.1 270 66.3
HanXRQChr05g0154811 Helianthus annuus HOM05D000434 ORTHO05D005992 4.9e-113 411.8 304 62.8
BcaC09g50836 Brassica carinata HOM05D000434 ORTHO05D001445 1.6e-111 406.8 321 59.5
Pp3c15_10910 Physcomitrium patens HOM05D000434 ORTHO05D005992 1.6e-111 406.8 313 58.8
HanXRQChr02g0032551 Helianthus annuus HOM05D000434 ORTHO05D005992 1.1e-109 400.6 304 60.9
AUR62028295 Chenopodium quinoa HOM05D000434 ORTHO05D005992 3.3e-109 399.1 307 61.6
Sed0024178 Sechium edule HOM05D000434 ORTHO05D005992 5.7e-109 398.3 318 58.2
unitig_22.g6297 Utricularia gibba HOM05D000434 ORTHO05D005992 1.3e-108 397.1 285 63.2
Migut.L00359 Erythranthe guttata HOM05D000434 ORTHO05D005992 2.4e-107 392.9 281 64.4
CBR_g48132 Chara braunii HOM05D000434 ORTHO05D005992 3.1e-107 392.5 308 57.8
Mapoly0153s0032 Marchantia polymorpha HOM05D000434 ORTHO05D005992 5.3e-107 391.7 305 58.0
Gohir.D12G188312 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.4e-99 367.1 322 56.2
Gorai.008G202100 Gossypium raimondii HOM05D000434 ORTHO05D005992 1.4e-99 367.1 322 56.2
Migut.L00543 Erythranthe guttata HOM05D000434 ORTHO05D005992 2.7e-95 352.8 296 58.4
SMO361G0760 Selaginella moellendorffii HOM05D000434 ORTHO05D005992 5.7e-93 345.1 310 53.5
SHI03475 Sapria himalayana HOM05D000434 ORTHO05D005992 7.7e-90 334.7 307 52.8
Sabra15G0108100 Salix brachista HOM05D000434 ORTHO05D005992 3.8e-89 332.4 227 66.1
CSS0026928 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 3.2e-88 329.3 219 65.3
ECA233G1405 Erigeron canadensis HOM05D000434 ORTHO05D005992 3.0e-70 269.6 256 52.7
SalBow5G4235 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.1e-67 261.2 306 45.1
HanXRQChr09g0263851 Helianthus annuus HOM05D000434 ORTHO05D005992 6.3e-60 235.3 168 66.7
HPP92_020252 Vanilla planifolia HOM05D000434 ORTHO05D005992 8.6e-57 224.9 128 75.0
SalBow5G1355 Salvia bowleyana HOM05D000434 ORTHO05D005992 4.3e-56 222.6 269 45.4
Potri.015G085232 Populus trichocarpa HOM05D000434 ORTHO05D005992 6.4e-44 182.2 128 66.4
Gohir.A12G185600 Gossypium hirsutum HOM05D000434 ORTHO05D005992 7.3e-40 168.7 117 67.5
Mapoly0043s0121 Marchantia polymorpha HOM05D000434 ORTHO05D005992 2.1e-39 167.2 315 32.4
MCO10G403 Micromonas commoda HOM05D000434 ORTHO05D005992 2.1e-39 167.2 334 32.3
AagrBONN_evm.TU.Sc2ySwM_368.1237 Anthoceros agrestis HOM05D000434 ORTHO05D005992 3.4e-29 133.3 243 35.0
MCO14G418 Micromonas commoda HOM05D000434 ORTHO05D005992 3.8e-28 129.8 340 27.9
Pp3c2_17660 Physcomitrium patens HOM05D000434 ORTHO05D005992 1.4e-27 127.9 99 57.6
HPP92_020253 Vanilla planifolia HOM05D000434 ORTHO05D005992 3.5e-18 96.7 50 86.0
Oeu057324.1 Olea europaea HOM05D000434 ORTHO05D005992 1.6e-07 61.2 75 45.3


User provided reference genes

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