Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_004597 Vanilla planifolia HOM05D001177 ORTHO05D007091 1.9e-90 335.9 178 100.0
Prupe.3G299100 Prunus persica HOM05D001177 ORTHO05D001507 2.9e-14 82.8 78 55.1
Aqoxy5G03563 Aquilegia oxysepala HOM05D001177 ORTHO05D007091 1.2e-12 77.4 99 45.5
Nn3g16573 Nelumbo nucifera HOM05D001177 ORTHO05D007091 1.2e-12 77.4 99 45.5
Sabra16G0217700 Salix brachista HOM05D001177 ORTHO05D007091 1.2e-12 77.4 100 39.0
CiPaw.04G032700 Carya illinoinensis HOM05D001177 ORTHO05D007091 2.7e-12 76.3 104 46.2
Dinv33388 Davidia involucrata HOM05D001177 ORTHO05D007091 2.7e-12 76.3 101 48.5
Potri.001G336832 Populus trichocarpa HOM05D001177 ORTHO05D007091 3.6e-12 75.9 101 40.6
Dinv00599 Davidia involucrata HOM05D001177 ORTHO05D007091 4.7e-12 75.5 131 42.7
MD17G1018600 Malus domestica HOM05D001177 ORTHO05D007091 4.7e-12 75.5 76 53.9
Ciclev10017544m.g Citrus clementina HOM05D001177 ORTHO05D001507 6.1e-12 75.1 101 45.5
Lju41A46T90 Lonicera japonica HOM05D001177 ORTHO05D007091 6.1e-12 75.1 106 48.1
MD09G1017800 Malus domestica HOM05D001177 ORTHO05D007091 6.1e-12 75.1 111 43.2
Eucgr.I01697 Eucalyptus grandis HOM05D001177 ORTHO05D001507 8.0e-12 74.7 140 31.4
Nitab4.5_0001031g0080 Nicotiana tabacum HOM05D001177 ORTHO05D007091 8.0e-12 74.7 106 44.3
Nitab4.5_0001863g0200 Nicotiana tabacum HOM05D001177 ORTHO05D007091 1.0e-11 74.3 106 44.3
Lj1g0014156 Lotus japonicus HOM05D001177 ORTHO05D007091 1.8e-11 73.6 102 43.1
Thecc.04G027000 Theobroma cacao HOM05D001177 ORTHO05D007091 1.8e-11 73.6 102 41.2
Cpa.g.sc1097.2 Carica papaya HOM05D001177 ORTHO05D007091 2.3e-11 73.2 77 50.6
Duzib187G1086 Durio zibethinus HOM05D001177 ORTHO05D007091 2.3e-11 73.2 77 53.2
Lalb_Chr14g0363031 Lupinus albus HOM05D001177 ORTHO05D007091 2.3e-11 73.2 93 48.4
Peaxi162Scf00420g00254 Petunia axillaris HOM05D001177 ORTHO05D007091 2.3e-11 73.2 84 52.4
PGR083G2095 Punica granatum HOM05D001177 ORTHO05D007091 2.3e-11 73.2 82 50.0
RcHm_v2.0_Chr2g0174111 Rosa chinensis HOM05D001177 ORTHO05D007091 2.3e-11 73.2 77 53.2
Solyc02g093760.4 Solanum lycopersicum HOM05D001177 ORTHO05D007091 2.3e-11 73.2 120 41.7
COL.COLO4_29271 Corchorus olitorius HOM05D001177 ORTHO05D007091 3.0e-11 72.8 98 41.8
Lsat_1_v5_gn_4_183800 Lactuca sativa HOM05D001177 ORTHO05D007091 3.9e-11 72.4 117 41.9
Psat3g169040 Pisum sativum HOM05D001177 ORTHO05D007091 5.2e-11 72.0 81 53.1
PGSC0003DMG400020230 Solanum tuberosum HOM05D001177 ORTHO05D007091 5.2e-11 72.0 88 50.0
SGA_v2.0_scaffold135G34937 Striga asiatica HOM05D001177 ORTHO05D007091 5.2e-11 72.0 103 40.8
Atru.chr6.2479 Acer truncatum HOM05D001177 ORTHO05D007091 6.7e-11 71.6 106 43.4
Haze_14808 Corylus avellana HOM05D001177 ORTHO05D007091 6.7e-11 71.6 101 44.6
QL02p073037 Quercus lobata HOM05D001177 ORTHO05D007091 1.1e-10 70.9 76 51.3
QL02p073106 Quercus lobata HOM05D001177 ORTHO05D007091 1.1e-10 70.9 76 51.3
Sopen02g017100 Solanum pennellii HOM05D001177 ORTHO05D007091 2.0e-10 70.1 100 42.0
TPR.G9071 Trifolium pratense HOM05D001177 ORTHO05D007091 2.0e-10 70.1 115 40.9
CSS0005984 Camellia sinensis var. sinensis HOM05D001177 ORTHO05D007091 2.6e-10 69.7 98 49.0
CSS0031107 Camellia sinensis var. sinensis HOM05D001177 ORTHO05D007091 2.6e-10 69.7 98 49.0
Manes.01G014100 Manihot esculenta HOM05D001177 ORTHO05D007091 2.6e-10 69.7 132 35.6
Ca_06569_v3 Cicer arietinum L. HOM05D001177 ORTHO05D007091 3.3e-10 69.3 78 50.0
Cc08_g11710 Coffea canephora HOM05D001177 ORTHO05D007091 3.3e-10 69.3 80 45.0
CsaV3_3G027350 Cucumis sativus L. HOM05D001177 ORTHO05D007091 3.3e-10 69.3 77 54.5
HanXRQChr09g0255621 Helianthus annuus HOM05D001177 ORTHO05D007091 3.3e-10 69.3 80 50.0
Glyma.16G063400 Glycine max HOM05D001177 ORTHO05D007091 4.4e-10 68.9 97 47.4
Sed0019906 Sechium edule HOM05D001177 ORTHO05D007091 4.4e-10 68.9 77 53.2
GSVIVG01003965001 Vitis vinifera HOM05D001177 ORTHO05D001507 4.4e-10 68.9 139 39.6
Actinidia36159 Actinidia chinensis HOM05D001177 ORTHO05D007091 9.7e-10 67.8 104 45.2
TWI12G0650 Tripterygium wilfordii HOM05D001177 ORTHO05D007091 9.7e-10 67.8 99 42.4
Nn4g22453 Nelumbo nucifera HOM05D001177 ORTHO05D007091 1.3e-09 67.4 53 64.2
DCAR_002963 Daucus carota HOM05D001177 ORTHO05D007091 1.7e-09 67.0 81 46.9
Gohir.A11G065300 Gossypium hirsutum HOM05D001177 ORTHO05D007091 1.7e-09 67.0 82 46.3
PGSC0003DMG400006969 Solanum tuberosum HOM05D001177 ORTHO05D007091 1.7e-09 67.0 101 41.6
Sopen02g038400 Solanum pennellii HOM05D001177 ORTHO05D007091 3.7e-09 65.9 68 57.4
FAN09G0779 Fragaria x ananassa HOM05D001177 ORTHO05D007091 4.8e-09 65.5 78 48.7
FAN09G4850 Fragaria x ananassa HOM05D001177 ORTHO05D007091 4.8e-09 65.5 78 48.7
Oeu048591.1 Olea europaea HOM05D001177 ORTHO05D007091 4.8e-09 65.5 73 47.9
Duzib147G1186 Durio zibethinus HOM05D001177 ORTHO05D007091 6.3e-09 65.1 77 45.5
FAN02G2178 Fragaria x ananassa HOM05D001177 ORTHO05D007091 6.3e-09 65.1 84 48.8
Medtr7g035445 Medicago truncatula HOM05D001177 ORTHO05D007091 6.3e-09 65.1 82 52.4
arahy.Tifrunner.gnm1.ann1.Q0SVNI Arachis hypogaea HOM05D001177 ORTHO05D007091 8.2e-09 64.7 119 37.8
arahy.Tifrunner.gnm1.ann1.R689L2 Arachis hypogaea HOM05D001177 ORTHO05D007091 8.2e-09 64.7 119 37.8
Solyc02g067970.4 Solanum lycopersicum HOM05D001177 ORTHO05D007091 8.2e-09 64.7 100 39.0
Gorai.007G074400 Gossypium raimondii HOM05D001177 ORTHO05D007091 1.1e-08 64.3 120 37.5
ClCG05G013200 Citrullus lanatus HOM05D001177 ORTHO05D007091 1.4e-08 63.9 100 44.0
MELO3C014848.2 Cucumis melo HOM05D001177 ORTHO05D007091 1.4e-08 63.9 81 48.1
Sed0005287 Sechium edule HOM05D001177 ORTHO05D007091 1.8e-08 63.5 75 50.7
Gohir.D11G069600 Gossypium hirsutum HOM05D001177 ORTHO05D007091 3.1e-08 62.8 120 36.7
Rhsim10G0011600 Rhododendron simsii HOM05D001177 ORTHO05D007091 4.1e-08 62.4 100 39.0
vmacro05919 Vaccinium macrocarpon HOM05D001177 ORTHO05D007091 4.1e-08 62.4 81 44.4
CDE07G0753 Ceratophyllum demersum HOM05D001177 ORTHO05D007091 7.0e-08 61.6 97 39.2
AUR62005578 Chenopodium quinoa HOM05D001177 ORTHO05D007091 7.0e-08 61.6 101 45.5
Nitab4.5_0005414g0040 Nicotiana tabacum HOM05D001177 ORTHO05D007091 7.0e-08 61.6 92 38.0
Nitab4.5_0000040g0530 Nicotiana tabacum HOM05D001177 ORTHO05D007091 1.2e-07 60.8 80 48.8
THA.LOC104805349 Tarenaya hassleriana HOM05D001177 ORTHO05D007091 1.2e-07 60.8 75 52.0
Manes.01G049405 Manihot esculenta HOM05D001177 ORTHO05D007091 1.6e-07 60.5 75 46.7
Phvul.008G148200 Phaseolus vulgaris HOM05D001177 ORTHO05D007091 3.5e-07 59.3 73 45.2
Sc03g0006890 Simmondsia chinensis HOM05D001177 ORTHO05D007091 4.5e-07 58.9 49 59.2
Sc03g0007010 Simmondsia chinensis HOM05D001177 ORTHO05D007091 4.5e-07 58.9 49 59.2
Migut.H00054 Erythranthe guttata HOM05D001177 ORTHO05D007091 5.9e-07 58.5 79 45.6
AUR62024152 Chenopodium quinoa HOM05D001177 ORTHO05D007091 7.7e-07 58.2 61 55.7
ATR0824G077 Amborella trichopoda HOM05D001177 ORTHO05D007091 1.0e-06 57.8 105 38.1
Glyma.19G082000 Glycine max HOM05D001177 ORTHO05D007091 1.0e-06 57.8 118 37.3
Os12g0267900 Oryza sativa ssp. japonica HOM05D001177 ORTHO05D007091 1.0e-06 57.8 63 52.4
CANSAT64G1259 Cannabis sativa HOM05D001177 ORTHO05D007091 1.3e-06 57.4 78 43.6
Manes.S095224 Manihot esculenta HOM05D001177 ORTHO05D007091 1.3e-06 57.4 91 37.4
Ah.02g130620 Amaranthus hybridus HOM05D001177 ORTHO05D007091 1.7e-06 57.0 60 51.7
CDE04G1204 Ceratophyllum demersum HOM05D001177 ORTHO05D007091 1.7e-06 57.0 75 46.7
ECA232G2553 Erigeron canadensis HOM05D001177 ORTHO05D007091 2.9e-06 56.2 70 52.9
EL10Ac6g13445 Beta vulgaris HOM05D001177 ORTHO05D007091 3.8e-06 55.8 53 54.7
TAR371G1081 Trochodendron aralioides HOM05D001177 ORTHO05D007091 5.0e-06 55.5 32 78.1
TAR446G0002 Trochodendron aralioides HOM05D001177 ORTHO05D007091 5.0e-06 55.5 76 40.8
PSO384G2778 Papaver somniferum HOM05D001177 ORTHO05D007091 6.5e-06 55.1 90 47.8
Gohir.A09G032700 Gossypium hirsutum HOM05D001177 ORTHO05D007091 8.5e-06 54.7 35 71.4


User provided reference genes

Program Settings