Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_004589 Vanilla planifolia HOM05D034831 ORTHO05D026005 3.7e-179 631.7 389 100.0
HPP92_004570 Vanilla planifolia HOM05D034831 ORTHO05D026005 1.8e-85 320.5 214 83.2
HPP92_024381 Vanilla planifolia HOM05D034831 ORTHO05D026005 5.9e-44 182.6 374 38.5
HPP92_004571 Vanilla planifolia HOM05D033123 ORTHO05D037822 8.6e-35 152.1 131 95.4
MBI07_g09921_MAGBIO Magnolia biondii HOM05D002129 ORTHO05D002188 2.2e-22 110.9 263 32.3
MD14G1121500 Malus domestica HOM05D002129 ORTHO05D002188 1.3e-14 85.1 215 29.3
MD06G1102300 Malus domestica HOM05D002129 ORTHO05D002188 2.7e-12 77.4 272 25.0
DCAR_005027 Daucus carota HOM05D002129 ORTHO05D002188 4.6e-12 76.6 238 29.0
Rhsim07G0084000 Rhododendron simsii HOM05D002129 ORTHO05D002188 1.9e-10 71.2 267 25.8
Sed0022097 Sechium edule HOM05D002129 ORTHO05D002188 1.6e-09 68.2 348 26.1
PSO384G3006 Papaver somniferum HOM05D031015 ORTHO05D002188 2.1e-09 67.8 256 24.6
Solyc08g082010.3 Solanum lycopersicum HOM05D002129 ORTHO05D002188 3.6e-09 67.0 227 26.9
Zm00001eb157980 Zea mays HOM05D053079 ORTHO05D026005 4.7e-09 66.6 270 26.3
CiPaw.11G123900 Carya illinoinensis HOM05D002129 ORTHO05D002188 1.8e-08 64.7 239 26.4
QL02p031434 Quercus lobata HOM05D002129 ORTHO05D002188 1.8e-08 64.7 213 27.2
Lalb_Chr05g0224251 Lupinus albus HOM05D002129 ORTHO05D002188 3.1e-08 63.9 299 23.1
Manes.01G046000 Manihot esculenta HOM05D002129 ORTHO05D002188 3.1e-08 63.9 243 27.2
Sopen08g030310 Solanum pennellii HOM05D002129 ORTHO05D002188 4.0e-08 63.5 255 24.7
LjContig00312_ERROPOS870357g0010036 Lotus japonicus HOM05D002129 ORTHO05D002188 5.2e-08 63.2 287 24.4
PGSC0003DMG400012303 Solanum tuberosum HOM05D002129 ORTHO05D002188 6.8e-08 62.8 227 26.9
unitig_52.g17439 Utricularia gibba HOM05D002129 ORTHO05D002188 8.9e-08 62.4 213 24.4
Prupe.5G115200 Prunus persica HOM05D002129 ORTHO05D002188 1.5e-07 61.6 212 27.4
Os01g0656600 Oryza sativa ssp. japonica HOM05D053079 ORTHO05D026005 2.0e-07 61.2 263 25.1
PSO170G1523 Papaver somniferum HOM05D031015 ORTHO05D002188 2.0e-07 61.2 251 24.3
Psat7g027480 Pisum sativum HOM05D002129 ORTHO05D002188 2.0e-07 61.2 295 23.7
Potri.003G137300 Populus trichocarpa HOM05D002129 ORTHO05D002188 2.0e-07 61.2 211 25.6
Sabra01G0070100 Salix brachista HOM05D002129 ORTHO05D002188 2.6e-07 60.8 220 27.7
Atru.chr9.2043 Acer truncatum HOM05D002129 ORTHO05D002188 4.4e-07 60.1 273 25.3
Haze_08667 Corylus avellana HOM05D002129 ORTHO05D002188 5.8e-07 59.7 271 24.0
Atru.chr9.2042 Acer truncatum HOM05D002129 ORTHO05D002188 7.6e-07 59.3 258 24.4
SalBow1G3214 Salvia bowleyana HOM05D002129 ORTHO05D002188 7.6e-07 59.3 283 28.3
unitig_62.g23616 Utricularia gibba HOM05D002129 ORTHO05D002188 9.9e-07 58.9 237 23.2
Migut.A00678 Erythranthe guttata HOM05D002129 ORTHO05D002188 1.7e-06 58.2 278 25.9
PSO135G0315 Papaver somniferum HOM05D031015 ORTHO05D002188 1.7e-06 58.2 255 23.9
QL12p010595 Quercus lobata HOM05D002129 ORTHO05D002188 1.7e-06 58.2 227 26.9
Cfa012842 Carpinus fangiana HOM05D002129 ORTHO05D002188 2.2e-06 57.8 263 23.2
Duzib068G0910 Durio zibethinus HOM05D002129 ORTHO05D002188 2.9e-06 57.4 256 24.6
AT1G64320 Arabidopsis thaliana HOM05D002129 ORTHO05D002188 3.7e-06 57.0 216 25.9
Gohir.D09G185400 Gossypium hirsutum HOM05D002129 ORTHO05D002188 3.7e-06 57.0 172 27.9
CSS0045654 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 4.9e-06 56.6 245 24.1
Nitab4.5_0000223g0210 Nicotiana tabacum HOM05D002129 ORTHO05D002188 4.9e-06 56.6 229 26.2
Gorai.006G207900 Gossypium raimondii HOM05D002129 ORTHO05D002188 6.4e-06 56.2 172 27.3
Oeu009945.1 Olea europaea HOM05D002129 ORTHO05D002188 6.4e-06 56.2 220 24.5
Lalb_Chr16g0376981 Lupinus albus HOM05D002129 ORTHO05D002188 8.4e-06 55.8 286 22.7
QL12p009828 Quercus lobata HOM05D002129 ORTHO05D002188 8.4e-06 55.8 224 26.3


User provided reference genes

Program Settings