Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_004533 Vanilla planifolia HOM05D007459 ORTHO05D009234 1.8e-69 265.8 133 100.0
HPP92_004524 Vanilla planifolia HOM05D007459 ORTHO05D009234 2.6e-60 235.3 132 90.9
Nn1g09730 Nelumbo nucifera HOM05D007459 ORTHO05D009234 1.1e-29 133.7 130 56.9
Os04g0495300 Oryza sativa ssp. japonica HOM05D007459 ORTHO05D009234 2.4e-29 132.5 124 54.8
TAR362G1157 Trochodendron aralioides HOM05D007459 ORTHO05D009234 2.2e-27 125.9 130 53.1
CSS0017730 Camellia sinensis var. sinensis HOM05D007459 ORTHO05D009234 6.5e-27 124.4 134 51.5
Lj6A129T18 Lonicera japonica HOM05D007459 ORTHO05D009234 1.9e-26 122.9 132 51.5
Solyc06g073170.1 Solanum lycopersicum HOM05D007459 ORTHO05D009234 1.9e-26 122.9 130 49.2
unitig_85.g27223 Utricularia gibba HOM05D007459 ORTHO05D009234 1.9e-26 122.9 130 47.7
Sopen06g029540 Solanum pennellii HOM05D007459 ORTHO05D009234 4.2e-26 121.7 130 49.2
Zm00001eb078650 Zea mays HOM05D007459 ORTHO05D009234 4.2e-26 121.7 131 54.2
ATR0743G068 Amborella trichopoda HOM05D007459 ORTHO05D009234 5.5e-26 121.3 137 47.4
Nitab4.5_0013525g0010 Nicotiana tabacum HOM05D007459 ORTHO05D009234 5.5e-26 121.3 131 48.9
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 2.1e-25 119.4 126 49.2
PGSC0003DMG400027018 Solanum tuberosum HOM05D007459 ORTHO05D009234 2.7e-25 119.0 130 48.5
Rhsim09G0013300 Rhododendron simsii HOM05D007459 ORTHO05D009234 8.0e-25 117.5 135 45.9
Dinv44169 Davidia involucrata HOM05D007459 ORTHO05D009234 1.4e-24 116.7 131 48.9
SGA_v2.0_scaffold25G10994 Striga asiatica HOM05D007459 ORTHO05D009234 1.8e-24 116.3 133 50.4
Hma1.2p1_2359F.1_g320593 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 2.3e-24 115.9 133 48.1
Peaxi162Scf00180g00063 Petunia axillaris HOM05D007459 ORTHO05D009234 3.0e-24 115.5 129 45.7
Nitab4.5_0002553g0080 Nicotiana tabacum HOM05D007459 ORTHO05D009234 4.0e-24 115.2 131 47.3
BcaC02g07169 Brassica carinata HOM05D007459 ORTHO05D009234 8.8e-24 114.0 126 50.8
BcaC02g07170 Brassica carinata HOM05D007459 ORTHO05D009234 8.8e-24 114.0 126 50.8
BolC4t28553H Brassica oleracea HOM05D007459 ORTHO05D009234 8.8e-24 114.0 126 50.8
Actinidia27099 Actinidia chinensis HOM05D007459 ORTHO05D009234 1.2e-23 113.6 127 48.8
A04p32820 Brassica napus HOM05D007459 ORTHO05D009234 1.2e-23 113.6 126 50.8
BraA04t18744Z Brassica rapa HOM05D007459 ORTHO05D009234 1.2e-23 113.6 126 50.8
Hma1.2p1_0554F.1_g177940 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 1.2e-23 113.6 133 47.4
Sc06g0007410 Simmondsia chinensis HOM05D007459 ORTHO05D009234 3.4e-23 112.1 127 48.0
Glyma.13G346600 Glycine max HOM05D007459 ORTHO05D009234 7.5e-23 110.9 124 46.0
BcaB06g29324 Brassica carinata HOM05D007459 ORTHO05D009234 9.8e-23 110.5 125 48.8
C04p70510 Brassica napus HOM05D007459 ORTHO05D009234 1.3e-22 110.2 126 48.4
Migut.N03078 Erythranthe guttata HOM05D007459 ORTHO05D009234 1.3e-22 110.2 129 45.7
MD04G1047100 Malus domestica HOM05D007459 ORTHO05D009234 2.2e-22 109.4 127 48.8
Thhalv10001662m.g Eutrema salsugineum HOM05D007459 ORTHO05D009234 3.7e-22 108.6 131 48.1
Cc03_g12180 Coffea canephora HOM05D007459 ORTHO05D009234 4.8e-22 108.2 136 43.4
PGR142G0909 Punica granatum HOM05D007459 ORTHO05D009234 4.8e-22 108.2 136 46.3
AL4G42340 Arabidopsis lyrata HOM05D007459 ORTHO05D009234 1.4e-21 106.7 130 47.7
Sp4g25650 Schrenkiella parvula HOM05D007459 ORTHO05D009234 2.4e-21 105.9 134 47.8
CARHR138660 Cardamine hirsuta HOM05D007459 ORTHO05D009234 3.1e-21 105.5 131 47.3
Carub.0004s2600 Capsella rubella HOM05D007459 ORTHO05D009234 4.1e-21 105.1 133 46.6
Ca_01236_v3 Cicer arietinum L. HOM05D007459 ORTHO05D009234 4.1e-21 105.1 130 44.6
Lj3g0013618 Lotus japonicus HOM05D007459 ORTHO05D009234 1.2e-20 103.6 127 44.1
Cfa015229 Carpinus fangiana HOM05D007459 ORTHO05D009234 1.6e-20 103.2 131 45.8
Thecc.04G171000 Theobroma cacao HOM05D007459 ORTHO05D009234 1.6e-20 103.2 136 44.1
CDE09G0571 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 2.0e-20 102.8 138 39.1
AT2G43540 Arabidopsis thaliana HOM05D007459 ORTHO05D009234 2.7e-20 102.4 130 46.2
Haze_01404 Corylus avellana HOM05D007459 ORTHO05D009234 3.5e-20 102.1 131 45.8
CiPaw.01G173000 Carya illinoinensis HOM05D007459 ORTHO05D009234 5.9e-20 101.3 135 43.7
QL10p052586 Quercus lobata HOM05D007459 ORTHO05D009234 5.9e-20 101.3 134 44.0
FAN05G5726 Fragaria x ananassa HOM05D007459 ORTHO05D009234 7.7e-20 100.9 127 44.1
TPR.G6565 Trifolium pratense HOM05D007459 ORTHO05D009234 7.7e-20 100.9 127 42.5
C04p70520 Brassica napus HOM05D007459 ORTHO05D009234 1.3e-19 100.1 114 49.1
Prupe.1G201700 Prunus persica HOM05D007459 ORTHO05D009234 1.3e-19 100.1 127 44.9
vmacro06567 Vaccinium macrocarpon HOM05D007459 ORTHO05D009234 1.3e-19 100.1 137 40.9
Medtr2g099440 Medicago truncatula HOM05D007459 ORTHO05D009234 1.7e-19 99.8 127 43.3
BolC4t28554H Brassica oleracea HOM05D007459 ORTHO05D009234 2.3e-19 99.4 114 49.1
Haze_01410 Corylus avellana HOM05D007459 ORTHO05D009234 2.3e-19 99.4 131 45.0
Phvul.005G155700 Phaseolus vulgaris HOM05D007459 ORTHO05D009234 2.3e-19 99.4 123 43.1
Atru.chr4.1350 Acer truncatum HOM05D007459 ORTHO05D009234 2.9e-19 99.0 135 43.0
Haze_01399 Corylus avellana HOM05D007459 ORTHO05D009234 2.9e-19 99.0 131 45.8
MELO3C017778.2 Cucumis melo HOM05D007459 ORTHO05D009234 3.8e-19 98.6 130 43.1
FvH4_6g31340 Fragaria vesca HOM05D007459 ORTHO05D009234 3.8e-19 98.6 127 43.3
FAN14G2685 Fragaria x ananassa HOM05D007459 ORTHO05D009234 3.8e-19 98.6 127 43.3
Lalb_Chr22g0352011 Lupinus albus HOM05D007459 ORTHO05D009234 3.8e-19 98.6 130 42.3
Manes.04G050800 Manihot esculenta HOM05D007459 ORTHO05D009234 3.8e-19 98.6 132 43.9
Psat5g291760 Pisum sativum HOM05D007459 ORTHO05D009234 5.0e-19 98.2 128 42.2
TPR.G13012 Trifolium pratense HOM05D007459 ORTHO05D009234 5.0e-19 98.2 127 41.7
RcHm_v2.0_Chr2g0138101 Rosa chinensis HOM05D007459 ORTHO05D009234 6.6e-19 97.8 132 40.9
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 1.9e-18 96.3 130 45.4
Ciclev10022478m.g Citrus clementina HOM05D007459 ORTHO05D009234 1.9e-18 96.3 143 39.2
CsaV3_4G002640 Cucumis sativus L. HOM05D007459 ORTHO05D009234 1.9e-18 96.3 130 44.6
Gohir.D02G110600 Gossypium hirsutum HOM05D007459 ORTHO05D009234 2.5e-18 95.9 136 44.1
Gorai.005G125500 Gossypium raimondii HOM05D007459 ORTHO05D009234 2.5e-18 95.9 136 44.1
Sed0000488 Sechium edule HOM05D007459 ORTHO05D009234 2.5e-18 95.9 125 44.0
TWI38G0757 Tripterygium wilfordii HOM05D007459 ORTHO05D009234 4.2e-18 95.1 132 42.4
Gohir.A02G092500 Gossypium hirsutum HOM05D007459 ORTHO05D009234 5.5e-18 94.7 136 43.4
THA.LOC104805901 Tarenaya hassleriana HOM05D007459 ORTHO05D009234 1.2e-17 93.6 136 42.6
CANSAT56G1213 Cannabis sativa HOM05D007459 ORTHO05D009234 1.6e-17 93.2 133 42.1
HanXRQChr14g0433791 Helianthus annuus HOM05D007459 ORTHO05D009234 2.1e-17 92.8 127 42.5
Duzib151G0483 Durio zibethinus HOM05D007459 ORTHO05D009234 3.6e-17 92.0 136 41.2
Lsat_1_v5_gn_8_158021 Lactuca sativa HOM05D007459 ORTHO05D009234 6.1e-17 91.3 129 41.1
Potri.007G134400 Populus trichocarpa HOM05D007459 ORTHO05D009234 1.8e-16 89.7 136 39.0
DCAR_028411 Daucus carota HOM05D007459 ORTHO05D009234 4.0e-16 88.6 120 44.2
Sabra07G0109100 Salix brachista HOM05D007459 ORTHO05D009234 5.2e-16 88.2 136 39.0
COL.COLO4_28394 Corchorus olitorius HOM05D007459 ORTHO05D009234 8.9e-16 87.4 137 41.6
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 1.5e-15 86.7 100 49.0
Duzib151G0582 Durio zibethinus HOM05D007459 ORTHO05D009234 8.3e-14 80.9 90 50.0
Mapoly0038s0008 Marchantia polymorpha HOM05D007459 ORTHO05D009234 3.2e-13 79.0 134 35.1
SEGI_40343 Sequoiadendron giganteum HOM05D007459 ORTHO05D009234 1.7e-11 73.2 128 35.2
Pp3c3_12780 Physcomitrium patens HOM05D007459 ORTHO05D009234 9.5e-10 67.4 131 32.8
Pp3c17_9330 Physcomitrium patens HOM05D007459 ORTHO05D009234 2.1e-09 66.2 129 35.7
Eucgr.L02147 Eucalyptus grandis HOM05D007459 ORTHO05D009234 1.7e-06 56.6 103 35.9


User provided reference genes

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