Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_004461 Vanilla planifolia HOM05D025440 ORTHO05D003066 9.9e-141 503.4 254 100.0
HPP92_016103 Vanilla planifolia HOM05D025440 ORTHO05D003066 4.9e-23 112.5 187 42.2
Nn5g28499 Nelumbo nucifera HOM05D002903 ORTHO05D003066 5.1e-12 75.9 194 30.9
CsaV3_6G031200 Cucumis sativus L. HOM05D002903 ORTHO05D003066 1.1e-11 74.7 197 36.5
MBI03_g20844_MAGBIO Magnolia biondii HOM05D002903 ORTHO05D003066 1.5e-11 74.3 181 36.5
ClCG08G006250 Citrullus lanatus HOM05D002903 ORTHO05D003066 4.3e-11 72.8 196 35.7
TAR625G1102 Trochodendron aralioides HOM05D002903 ORTHO05D003066 4.3e-11 72.8 192 33.3
Dinv24393 Davidia involucrata HOM05D002903 ORTHO05D003066 5.6e-11 72.4 246 29.3
PGR044G0841 Punica granatum HOM05D002903 ORTHO05D003066 5.6e-11 72.4 231 31.2
Duzib041G0628 Durio zibethinus HOM05D002903 ORTHO05D003066 1.3e-10 71.2 176 32.4
FAN20G1459 Fragaria x ananassa HOM05D002903 ORTHO05D003066 1.3e-10 71.2 238 29.8
MELO3C008433.2 Cucumis melo HOM05D002903 ORTHO05D003066 1.6e-10 70.9 195 35.4
vmacro00875 Vaccinium macrocarpon HOM05D002903 ORTHO05D003066 2.8e-10 70.1 136 36.0
CSS0044741 Camellia sinensis var. sinensis HOM05D002903 ORTHO05D003066 3.6e-10 69.7 268 29.5
FAN24G3523 Fragaria x ananassa HOM05D002903 ORTHO05D003066 6.2e-10 68.9 241 30.7
Gohir.D02G076000 Gossypium hirsutum HOM05D002903 ORTHO05D003066 6.2e-10 68.9 197 32.0
Gorai.005G085300 Gossypium raimondii HOM05D002903 ORTHO05D003066 6.2e-10 68.9 197 32.0
RcHm_v2.0_Chr6g0278041 Rosa chinensis HOM05D002903 ORTHO05D003066 6.2e-10 68.9 254 29.1
FAN15G2216 Fragaria x ananassa HOM05D002903 ORTHO05D003066 8.1e-10 68.6 202 30.2
Hma1.2p1_0539F.1_g174540 Hydrangea macrophylla HOM05D002903 ORTHO05D003066 8.1e-10 68.6 188 31.9
Nn1g06302 Nelumbo nucifera HOM05D002903 ORTHO05D003066 8.1e-10 68.6 249 27.3
Sabra05G0141500 Salix brachista HOM05D002903 ORTHO05D003066 8.1e-10 68.6 195 32.3
FvH4_2g15290 Fragaria vesca HOM05D002903 ORTHO05D003066 1.1e-09 68.2 241 30.7
HPP92_005668 Vanilla planifolia HOM05D025440 ORTHO05D003066 1.1e-09 68.2 196 31.6
Eucgr.F02770 Eucalyptus grandis HOM05D002903 ORTHO05D003066 1.4e-09 67.8 187 31.0
Gohir.A02G112000 Gossypium hirsutum HOM05D002903 ORTHO05D003066 1.4e-09 67.8 250 26.8
Dinv19537 Davidia involucrata HOM05D002903 ORTHO05D003066 1.8e-09 67.4 228 28.5
CARHR021780 Cardamine hirsuta HOM05D002903 ORTHO05D003066 2.4e-09 67.0 218 30.3
Thecc.08G137400 Theobroma cacao HOM05D002903 ORTHO05D003066 2.4e-09 67.0 187 31.0
Carub.0001s2080 Capsella rubella HOM05D002903 ORTHO05D003066 4.0e-09 66.2 217 31.3
Gohir.D03G062500 Gossypium hirsutum HOM05D002903 ORTHO05D003066 6.9e-09 65.5 229 26.6
MBI06_g27454_MAGBIO Magnolia biondii HOM05D002903 ORTHO05D003066 6.9e-09 65.5 184 31.5
QL09p029695 Quercus lobata HOM05D002903 ORTHO05D003066 6.9e-09 65.5 187 31.6
Glyma.13G036100 Glycine max HOM05D002903 ORTHO05D003066 9.0e-09 65.1 183 32.8
Gorai.013G109100 Gossypium raimondii HOM05D002903 ORTHO05D003066 9.0e-09 65.1 250 25.6
AT1G21390 Arabidopsis thaliana HOM05D002903 ORTHO05D003066 1.2e-08 64.7 211 31.3
TAR376G0422 Trochodendron aralioides HOM05D002903 ORTHO05D003066 1.2e-08 64.7 201 30.8
FAN27G1654 Fragaria x ananassa HOM05D002903 ORTHO05D003066 1.5e-08 64.3 243 29.6
Sed0027661 Sechium edule HOM05D002903 ORTHO05D003066 1.5e-08 64.3 197 30.5
Nitab4.5_0008281g0010 Nicotiana tabacum HOM05D002903 ORTHO05D003066 2.0e-08 63.9 144 34.0
Sp1g18940 Schrenkiella parvula HOM05D002903 ORTHO05D003066 2.0e-08 63.9 227 30.8
GSVIVG01022345001 Vitis vinifera HOM05D002903 ORTHO05D003066 2.0e-08 63.9 217 31.3
BcaB07g32128 Brassica carinata HOM05D002903 ORTHO05D003066 2.6e-08 63.5 216 30.6
CSS0044801 Camellia sinensis var. sinensis HOM05D002903 ORTHO05D003066 2.6e-08 63.5 187 30.5
Peaxi162Scf00505g00053 Petunia axillaris HOM05D002903 ORTHO05D003066 2.6e-08 63.5 182 30.8
Aqoxy5G02305 Aquilegia oxysepala HOM05D002903 ORTHO05D003066 3.4e-08 63.2 175 30.9
CiPaw.03G119900 Carya illinoinensis HOM05D002903 ORTHO05D003066 5.8e-08 62.4 231 30.7
Cc10_g13350 Coffea canephora HOM05D002903 ORTHO05D003066 5.8e-08 62.4 189 32.3
Haze_25271 Corylus avellana HOM05D002903 ORTHO05D003066 5.8e-08 62.4 257 24.1
Haze_25273 Corylus avellana HOM05D002903 ORTHO05D003066 5.8e-08 62.4 257 24.1
Sed0005775 Sechium edule HOM05D002903 ORTHO05D003066 5.8e-08 62.4 210 30.0
Actinidia03429 Actinidia chinensis HOM05D002903 ORTHO05D003066 7.6e-08 62.0 199 31.7
Gohir.A02G069300 Gossypium hirsutum HOM05D002903 ORTHO05D003066 7.6e-08 62.0 210 31.4
Manes.18G084700 Manihot esculenta HOM05D002903 ORTHO05D003066 9.9e-08 61.6 251 29.5
Glyma.14G158800 Glycine max HOM05D002903 ORTHO05D003066 1.3e-07 61.2 182 32.4
Hma1.2p1_1125F.1_g259580 Hydrangea macrophylla HOM05D002903 ORTHO05D003066 1.3e-07 61.2 193 29.5
Haze_25272 Corylus avellana HOM05D002903 ORTHO05D003066 1.7e-07 60.8 257 23.7
AL1G34490 Arabidopsis lyrata HOM05D002903 ORTHO05D003066 3.8e-07 59.7 208 30.3
CiPaw.15G024600 Carya illinoinensis HOM05D002903 ORTHO05D003066 3.8e-07 59.7 203 29.6
CiPaw.16G019600 Carya illinoinensis HOM05D002903 ORTHO05D003066 3.8e-07 59.7 161 31.1
DCAR_001203 Daucus carota HOM05D002903 ORTHO05D003066 3.8e-07 59.7 195 29.7
Phvul.001G065100 Phaseolus vulgaris HOM05D002903 ORTHO05D003066 3.8e-07 59.7 244 28.7
Solyc06g059860.3 Solanum lycopersicum HOM05D002903 ORTHO05D003066 3.8e-07 59.7 143 29.4
CDE08G0104 Ceratophyllum demersum HOM05D002903 ORTHO05D003066 4.9e-07 59.3 191 30.4
Glyma.06G119800 Glycine max HOM05D002903 ORTHO05D003066 4.9e-07 59.3 120 33.3
Oeu001551.1 Olea europaea HOM05D002903 ORTHO05D003066 4.9e-07 59.3 174 30.5
MSTRG.1394 Avicennia marina HOM05D002903 ORTHO05D003066 6.4e-07 58.9 239 28.0
MSTRG.24179 Avicennia marina HOM05D002903 ORTHO05D003066 6.4e-07 58.9 225 28.4
A07p28150 Brassica napus HOM05D002903 ORTHO05D003066 6.4e-07 58.9 177 29.9
BraA07t30459Z Brassica rapa HOM05D000744 ORTHO05D003066 6.4e-07 58.9 177 29.9
Cpa.g.sc26.66 Carica papaya HOM05D002903 ORTHO05D003066 8.4e-07 58.5 192 29.7
Manes.02G172300 Manihot esculenta HOM05D002903 ORTHO05D003066 8.4e-07 58.5 248 28.2
Sopen05g034770 Solanum pennellii HOM05D002903 ORTHO05D003066 8.4e-07 58.5 177 30.5
BcaB02g07090 Brassica carinata HOM05D002903 ORTHO05D003066 1.1e-06 58.2 187 28.9
Medtr1g029550 Medicago truncatula HOM05D002903 ORTHO05D003066 1.1e-06 58.2 188 29.8
Rhsim11G0074400 Rhododendron simsii HOM05D002903 ORTHO05D003066 1.1e-06 58.2 89 37.1
Solyc05g056380.3 Solanum lycopersicum HOM05D002903 ORTHO05D003066 1.1e-06 58.2 177 30.5
TWI60G0469 Tripterygium wilfordii HOM05D002903 ORTHO05D003066 1.1e-06 58.2 160 33.1
Potri.002G075400 Populus trichocarpa HOM05D002903 ORTHO05D003066 1.4e-06 57.8 184 29.9
PGSC0003DMG400012217 Solanum tuberosum HOM05D002903 ORTHO05D003066 1.4e-06 57.8 176 28.4
C06p31570 Brassica napus HOM05D000744 ORTHO05D000332 1.9e-06 57.4 175 30.9
SGA_v2.0_scaffold20G09019 Striga asiatica HOM05D002903 ORTHO05D003066 1.9e-06 57.4 156 32.1
Migut.N03253 Erythranthe guttata HOM05D002903 ORTHO05D003066 2.4e-06 57.0 169 28.4
Lalb_Chr10g0101441 Lupinus albus HOM05D002903 ORTHO05D003066 2.4e-06 57.0 182 29.7
Os11g0199801 Oryza sativa ssp. japonica HOM05D002903 ORTHO05D003066 2.4e-06 57.0 148 31.8
Sc26g0002820 Simmondsia chinensis HOM05D002903 ORTHO05D003066 2.4e-06 57.0 124 35.5
Sopen06g019940 Solanum pennellii HOM05D002903 ORTHO05D003066 2.4e-06 57.0 143 26.6
BcaC08g45488 Brassica carinata HOM05D000744 ORTHO05D000332 3.2e-06 56.6 174 31.0
BolC6t38286H Brassica oleracea HOM05D002903 ORTHO05D003066 3.2e-06 56.6 174 31.0
Sopen08g029160 Solanum pennellii HOM05D002903 ORTHO05D003066 3.2e-06 56.6 171 28.1
Dinv41151 Davidia involucrata HOM05D002903 ORTHO05D003066 4.2e-06 56.2 179 29.6
FAN23G0840 Fragaria x ananassa HOM05D002903 ORTHO05D003066 4.2e-06 56.2 223 28.7
Sabra02G0058900 Salix brachista HOM05D002903 ORTHO05D003066 4.2e-06 56.2 252 27.4
Dinv25773 Davidia involucrata HOM05D002903 ORTHO05D003066 5.5e-06 55.8 237 26.6
Duzib093G1863 Durio zibethinus HOM05D002903 ORTHO05D003066 5.5e-06 55.8 204 30.9
Sabra05G0053700 Salix brachista HOM05D002903 ORTHO05D003066 5.5e-06 55.8 141 33.3
TWI34G0043 Tripterygium wilfordii HOM05D002903 ORTHO05D003066 5.5e-06 55.8 116 32.8
HPP92_005667 Vanilla planifolia HOM05D025440 ORTHO05D428282 5.5e-06 55.8 163 35.6
HPP92_019400 Vanilla planifolia HOM05D025440 ORTHO05D003066 5.5e-06 55.8 237 29.5
Cpa.g.sc42.173 Carica papaya HOM05D002903 ORTHO05D003066 7.1e-06 55.5 113 33.6
FAN28G2835 Fragaria x ananassa HOM05D002903 ORTHO05D003066 7.1e-06 55.5 222 27.5
MD10G1007900 Malus domestica HOM05D002903 ORTHO05D003066 7.1e-06 55.5 271 26.9
Solyc08g080860.4 Solanum lycopersicum HOM05D002903 ORTHO05D003066 7.1e-06 55.5 171 29.8


User provided reference genes

Program Settings