Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_004418 Vanilla planifolia HOM05D006151 ORTHO05D007487 6.5e-166 587.4 315 100.0
TAR628G1632 Trochodendron aralioides HOM05D006151 ORTHO05D007487 9.4e-32 141.7 232 41.4
Nn5g28758 Nelumbo nucifera HOM05D006151 ORTHO05D007487 2.7e-31 140.2 216 41.2
PSO447G0272 Papaver somniferum HOM05D006151 ORTHO05D007487 1.4e-30 137.9 246 36.2
TAR381G1121 Trochodendron aralioides HOM05D006151 ORTHO05D007487 1.4e-30 137.9 237 40.5
Nn1g06074 Nelumbo nucifera HOM05D006151 ORTHO05D007487 1.8e-30 137.5 239 38.9
Oeu046040.1 Olea europaea HOM05D006151 ORTHO05D007487 1.8e-30 137.5 227 37.4
Dinv25871 Davidia involucrata HOM05D006151 ORTHO05D007487 2.3e-30 137.1 237 38.8
MBI09_g40713_MAGBIO Magnolia biondii HOM05D006151 ORTHO05D007487 6.7e-30 135.6 210 41.0
Cfa018318 Carpinus fangiana HOM05D006151 ORTHO05D007487 8.8e-30 135.2 206 39.8
PSO210G3290 Papaver somniferum HOM05D006151 ORTHO05D007487 1.1e-29 134.8 247 36.4
GSVIVG01034539001 Vitis vinifera HOM05D006151 ORTHO05D007487 1.1e-29 134.8 225 40.9
Eucgr.F04235 Eucalyptus grandis HOM05D006151 ORTHO05D007487 1.5e-29 134.4 201 39.3
Thecc.08G153600 Theobroma cacao HOM05D006151 ORTHO05D007487 9.7e-29 131.7 227 36.1
Actinidia04761 Actinidia chinensis HOM05D006151 ORTHO05D007487 2.8e-28 130.2 212 39.6
Manes.02G180000 Manihot esculenta HOM05D006151 ORTHO05D007487 2.8e-28 130.2 214 37.4
Sed0016357 Sechium edule HOM05D006151 ORTHO05D007487 2.8e-28 130.2 223 35.9
MSTRG.1087 Avicennia marina HOM05D006151 ORTHO05D007487 3.7e-28 129.8 221 41.6
Duzib041G0750 Durio zibethinus HOM05D006151 ORTHO05D007487 3.7e-28 129.8 240 36.7
Peaxi162Scf00599g00048 Petunia axillaris HOM05D006151 ORTHO05D007487 1.8e-27 127.5 220 37.3
Duzib116G0486 Durio zibethinus HOM05D006151 ORTHO05D007487 2.4e-27 127.1 225 34.2
Lj5g0026688 Lotus japonicus HOM05D006151 ORTHO05D007487 3.1e-27 126.7 239 33.1
VMungo0464G0684 Vigna mungo HOM05D006151 ORTHO05D007487 3.1e-27 126.7 240 35.4
Gorai.005G078700 Gossypium raimondii HOM05D006151 ORTHO05D007487 7.0e-27 125.6 226 35.0
Nitab4.5_0001062g0090 Nicotiana tabacum HOM05D006151 ORTHO05D007487 9.1e-27 125.2 203 36.9
CSS0023884 Camellia sinensis var. sinensis HOM05D006151 ORTHO05D007487 1.2e-26 124.8 229 38.0
Gohir.D05G244900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 1.5e-26 124.4 236 39.0
Sopen04g027470 Solanum pennellii HOM05D006151 ORTHO05D007487 1.5e-26 124.4 236 35.6
COL.COLO4_04528 Corchorus olitorius HOM05D006151 ORTHO05D007487 2.6e-26 123.6 237 35.0
Phvul.007G081100 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 3.4e-26 123.2 227 35.7
Gohir.D02G069400 Gossypium hirsutum HOM05D006151 ORTHO05D007487 5.9e-26 122.5 226 34.5
Cpa.g.sc21.206 Carica papaya HOM05D006151 ORTHO05D007487 7.7e-26 122.1 239 35.6
Hma1.2p1_0105F.1_g050630 Hydrangea macrophylla HOM05D006151 ORTHO05D007487 7.7e-26 122.1 235 36.6
Sp1g18760 Schrenkiella parvula HOM05D006151 ORTHO05D007487 7.7e-26 122.1 214 40.2
Solyc04g071500.4 Solanum lycopersicum HOM05D006151 ORTHO05D007487 7.7e-26 122.1 225 36.4
Rhsim11G0083500 Rhododendron simsii HOM05D006151 ORTHO05D007487 1.0e-25 121.7 223 37.7
ClCG08G007050 Citrullus lanatus HOM05D006151 ORTHO05D007487 1.3e-25 121.3 222 34.7
C05p19820 Brassica napus HOM05D006151 ORTHO05D007487 1.7e-25 120.9 214 39.7
BolC5t30681H Brassica oleracea HOM05D006151 ORTHO05D007487 1.7e-25 120.9 214 39.7
BraA06t24819Z Brassica rapa HOM05D006151 ORTHO05D007487 1.7e-25 120.9 215 39.5
Glyma.20G168200 Glycine max HOM05D006151 ORTHO05D007487 1.7e-25 120.9 230 34.3
CAN.G268.27 Capsicum annuum HOM05D006151 ORTHO05D007487 2.2e-25 120.6 214 35.5
Lalb_Chr06g0161651 Lupinus albus HOM05D006151 ORTHO05D007487 2.2e-25 120.6 219 35.2
A06p17160 Brassica napus HOM05D006151 ORTHO05D007487 3.8e-25 119.8 215 39.5
Atru.chr13.2098 Acer truncatum HOM05D006151 ORTHO05D007487 5.0e-25 119.4 229 33.2
CANSAT25G1414 Cannabis sativa HOM05D006151 ORTHO05D007487 5.0e-25 119.4 226 37.2
Glyma.10G223700 Glycine max HOM05D006151 ORTHO05D007487 5.0e-25 119.4 230 33.5
Glyma.16G166000 Glycine max HOM05D006151 ORTHO05D007487 5.0e-25 119.4 215 34.4
Gohir.A02G063800 Gossypium hirsutum HOM05D006151 ORTHO05D007487 5.0e-25 119.4 219 34.7
Nitab4.5_0009071g0020 Nicotiana tabacum HOM05D006151 ORTHO05D007487 5.0e-25 119.4 209 35.4
BcaB07g32102 Brassica carinata HOM05D006151 ORTHO05D007487 6.5e-25 119.0 217 37.3
THA.LOC104813720 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 6.5e-25 119.0 212 38.2
CARHR021560 Cardamine hirsuta HOM05D006151 ORTHO05D007487 8.5e-25 118.6 225 36.0
MELO3C008336.2 Cucumis melo HOM05D006151 ORTHO05D007487 8.5e-25 118.6 224 35.7
FAN20G0746 Fragaria x ananassa HOM05D006151 ORTHO05D007487 8.5e-25 118.6 233 33.9
Migut.C00998 Erythranthe guttata HOM05D006151 ORTHO05D007487 1.1e-24 118.2 225 36.0
Hund26694 Selenicereus undatus HOM05D006151 ORTHO05D007487 1.1e-24 118.2 214 36.4
PGSC0003DMG400024091 Solanum tuberosum HOM05D006151 ORTHO05D007487 1.1e-24 118.2 222 37.8
VMungo0720G2232 Vigna mungo HOM05D006151 ORTHO05D007487 1.1e-24 118.2 204 36.3
arahy.Tifrunner.gnm1.ann1.2F6CI2 Arachis hypogaea HOM05D006151 ORTHO05D007487 1.4e-24 117.9 247 34.0
Peaxi162Scf01294g00115 Petunia axillaris HOM05D006151 ORTHO05D007487 1.4e-24 117.9 223 33.2
Duzib093G0584 Durio zibethinus HOM05D006151 ORTHO05D007487 1.9e-24 117.5 227 33.9
vmacro01457 Vaccinium macrocarpon HOM05D006151 ORTHO05D007487 1.9e-24 117.5 211 36.5
Cc10_g14430 Coffea canephora HOM05D006151 ORTHO05D007487 2.5e-24 117.1 219 34.2
AL1G34140 Arabidopsis lyrata HOM05D006151 ORTHO05D007487 3.2e-24 116.7 219 36.5
FAN15G1313 Fragaria x ananassa HOM05D006151 ORTHO05D007487 3.2e-24 116.7 234 34.2
Potri.005G192800 Populus trichocarpa HOM05D006151 ORTHO05D007487 3.2e-24 116.7 223 34.1
Aqoxy5G02075 Aquilegia oxysepala HOM05D006151 ORTHO05D007487 4.2e-24 116.3 209 38.8
AUR62013592 Chenopodium quinoa HOM05D006151 ORTHO05D007487 4.2e-24 116.3 211 36.0
FvH4_2g13650 Fragaria vesca HOM05D006151 ORTHO05D007487 5.5e-24 115.9 228 33.8
FAN24G0867 Fragaria x ananassa HOM05D006151 ORTHO05D007487 5.5e-24 115.9 228 33.8
FAN27G2560 Fragaria x ananassa HOM05D006151 ORTHO05D007487 7.2e-24 115.5 228 33.8
RcHm_v2.0_Chr6g0275291 Rosa chinensis HOM05D006151 ORTHO05D007487 9.4e-24 115.2 224 34.8
Ciclev10002306m.g Citrus clementina HOM05D006151 ORTHO05D007487 1.6e-23 114.4 218 33.5
DCAR_001140 Daucus carota HOM05D006151 ORTHO05D007487 2.1e-23 114.0 203 36.0
Potri.002G067600 Populus trichocarpa HOM05D006151 ORTHO05D007487 2.1e-23 114.0 215 37.2
BcaB03g14281 Brassica carinata HOM05D006151 ORTHO05D007487 3.6e-23 113.2 222 36.9
AUR62026702 Chenopodium quinoa HOM05D006151 ORTHO05D007487 3.6e-23 113.2 205 35.1
Gorai.009G254700 Gossypium raimondii HOM05D006151 ORTHO05D007487 4.7e-23 112.8 230 38.3
Manes.18G092600 Manihot esculenta HOM05D006151 ORTHO05D007487 4.7e-23 112.8 203 35.5
Phvul.004G093600 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 4.7e-23 112.8 221 34.4
BcaC05g26017 Brassica carinata HOM05D006151 ORTHO05D007487 6.1e-23 112.5 175 41.1
SGA_v2.0_scaffold24G10349 Striga asiatica HOM05D000219 ORTHO05D000226 6.1e-23 112.5 191 36.6
Carub.0001s2055 Capsella rubella HOM05D006151 ORTHO05D007487 1.8e-22 110.9 224 37.1
Prupe.8G031400 Prunus persica HOM05D006151 ORTHO05D007487 1.8e-22 110.9 238 33.6
Dinv41078 Davidia involucrata HOM05D006151 ORTHO05D007487 3.0e-22 110.2 212 36.3
Sed0009804 Sechium edule HOM05D006151 ORTHO05D007487 3.0e-22 110.2 235 34.9
HanXRQChr05g0161971 Helianthus annuus HOM05D006151 ORTHO05D007487 3.9e-22 109.8 254 34.3
QL02p039028 Quercus lobata HOM05D006151 ORTHO05D007487 3.9e-22 109.8 210 33.3
AT1G21090 Arabidopsis thaliana HOM05D006151 ORTHO05D007487 5.2e-22 109.4 219 34.2
TWI34G1794 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 5.2e-22 109.4 222 33.3
CiPaw.15G015800 Carya illinoinensis HOM05D006151 ORTHO05D007487 6.7e-22 109.0 234 31.6
THA.LOC104812035 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 6.7e-22 109.0 193 35.8
Psat6g192320 Pisum sativum HOM05D006151 ORTHO05D007487 8.8e-22 108.6 233 31.8
Medtr1g098580 Medicago truncatula HOM05D006151 ORTHO05D007487 1.1e-21 108.2 231 32.9
CsaV3_6G005160 Cucumis sativus L. HOM05D006151 ORTHO05D007487 2.6e-21 107.1 199 33.7
MD10G1026200 Malus domestica HOM05D006151 ORTHO05D007487 2.6e-21 107.1 223 35.0
Ca_10677_v3 Cicer arietinum L. HOM05D006151 ORTHO05D007487 7.4e-21 105.5 199 33.2
Gohir.A05G243900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 2.2e-20 104.0 220 37.7
MD05G1026900 Malus domestica HOM05D006151 ORTHO05D007487 2.8e-20 103.6 229 34.9
Nitab4.5_0002487g0030 Nicotiana tabacum HOM05D006151 ORTHO05D007487 2.8e-20 103.6 199 35.7
Actinidia29533 Actinidia chinensis HOM05D006151 ORTHO05D007487 1.6e-18 97.8 135 37.0
PGR044G2378 Punica granatum HOM05D006151 ORTHO05D007487 3.5e-18 96.7 229 35.8
PGR100G0011 Punica granatum HOM05D006151 ORTHO05D007487 3.5e-18 96.7 229 35.8
ECA246G2194 Erigeron canadensis HOM05D006151 ORTHO05D007487 5.9e-18 95.9 265 29.8
TPR.G17045 Trifolium pratense HOM05D006151 ORTHO05D007487 5.9e-18 95.9 232 28.9
Hund17438 Selenicereus undatus HOM05D006151 ORTHO05D007487 7.7e-18 95.5 230 29.6
Lsat_1_v5_gn_6_100560 Lactuca sativa HOM05D006151 ORTHO05D007487 1.7e-17 94.4 278 29.5
EL10Ac1g01556 Beta vulgaris HOM05D006151 ORTHO05D007487 3.8e-17 93.2 194 33.0
Thhalv10008611m.g Eutrema salsugineum HOM05D006151 ORTHO05D007487 2.5e-16 90.5 149 41.6
BcaC06g34887 Brassica carinata HOM05D006151 ORTHO05D007487 3.2e-16 90.1 147 39.5
BolC7t42748H Brassica oleracea HOM05D006151 ORTHO05D007487 3.2e-16 90.1 147 39.5
PGR080G0005 Punica granatum HOM05D006151 ORTHO05D007487 4.2e-16 89.7 215 35.3
TWI60G0448 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 4.2e-16 89.7 147 34.0
Aa31LG7G5240 Aethionema arabicum HOM05D006151 ORTHO05D007487 7.2e-16 89.0 144 38.2
A07p15290 Brassica napus HOM05D006151 ORTHO05D007487 7.2e-16 89.0 147 40.1
C07p22470 Brassica napus HOM05D006151 ORTHO05D007487 7.2e-16 89.0 147 39.5
BraA07t29267Z Brassica rapa HOM05D006151 ORTHO05D007487 1.2e-15 88.2 147 39.5
CDE08G0602 Ceratophyllum demersum HOM05D006151 ORTHO05D007487 2.1e-15 87.4 216 33.8
unitig_748.g7705 Utricularia gibba HOM05D006151 ORTHO05D007487 4.0e-14 83.2 204 33.8
arahy.Tifrunner.gnm1.ann1.5IW37T Arachis hypogaea HOM05D006151 ORTHO05D007487 1.2e-13 81.6 181 32.6
Lj7C374T8 Lonicera japonica HOM05D006151 ORTHO05D007487 6.3e-12 75.9 145 37.2
Ah.05g167920 Amaranthus hybridus HOM05D006151 ORTHO05D007487 5.3e-11 72.8 212 29.7
Nitab4.5_0010143g0010 Nicotiana tabacum HOM05D006151 ORTHO05D007487 1.5e-08 64.7 137 35.8


User provided reference genes

Program Settings