Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_004364 Vanilla planifolia HOM05D002335 ORTHO05D006282 7.7e-176 620.5 353 100.0
HPP92_004366 Vanilla planifolia HOM05D002335 ORTHO05D006282 4.9e-146 521.5 353 87.8
MBI19_g16223_MAGBIO Magnolia biondii HOM05D002335 ORTHO05D006282 1.3e-135 486.9 350 76.3
Nn8g38636 Nelumbo nucifera HOM05D002335 ORTHO05D006282 4.9e-130 468.4 347 75.2
TAR383G0969 Trochodendron aralioides HOM05D002335 ORTHO05D006282 7.1e-129 464.5 343 76.4
Aqoxy7G04129 Aquilegia oxysepala HOM05D002335 ORTHO05D006282 9.6e-126 454.1 340 75.3
Ciclev10008755m.g Citrus clementina HOM05D002335 ORTHO05D006282 1.7e-122 443.4 347 68.0
Hma1.2p1_0169F.1_g074510 Hydrangea macrophylla HOM05D002335 ORTHO05D006282 2.2e-122 443.0 334 69.2
Cfa002987 Carpinus fangiana HOM05D002335 ORTHO05D006282 1.4e-121 440.3 334 68.0
Dinv25558 Davidia involucrata HOM05D002335 ORTHO05D006282 1.9e-121 439.9 334 75.1
Sopen12g004050 Solanum pennellii HOM05D002335 ORTHO05D006282 2.4e-121 439.5 337 67.7
Solyc12g009100.2 Solanum lycopersicum HOM05D002335 ORTHO05D006282 1.6e-120 436.8 337 67.4
Dinv42395 Davidia involucrata HOM05D002335 ORTHO05D006282 6.0e-120 434.9 338 72.5
PSO135G0390 Papaver somniferum HOM05D002335 ORTHO05D006282 1.7e-119 433.3 340 66.2
CiPaw.04G143000 Carya illinoinensis HOM05D002335 ORTHO05D006282 2.3e-119 433.0 339 66.7
PSO724G0129 Papaver somniferum HOM05D002335 ORTHO05D006282 1.9e-118 429.9 340 65.3
Gohir.D13G196375 Gossypium hirsutum HOM05D002335 ORTHO05D006282 5.6e-118 428.3 354 63.8
Gohir.A13G190800 Gossypium hirsutum HOM05D002335 ORTHO05D006282 7.3e-118 427.9 354 63.8
GSVIVG01015081001 Vitis vinifera HOM05D002335 ORTHO05D006282 1.6e-117 426.8 338 71.0
FvH4_1g08690 Fragaria vesca HOM05D002335 ORTHO05D006282 2.8e-117 426.0 334 66.5
CSS0005090 Camellia sinensis var. sinensis HOM05D002335 ORTHO05D006282 3.6e-117 425.6 338 71.0
Glyma.15G177700 Glycine max HOM05D002335 ORTHO05D006282 6.2e-117 424.9 334 67.7
Potri.018G056500 Populus trichocarpa HOM05D002335 ORTHO05D006282 8.1e-117 424.5 343 67.3
ATR0598G025 Amborella trichopoda HOM05D002335 ORTHO05D006282 1.1e-116 424.1 340 65.0
Gorai.013G224300 Gossypium raimondii HOM05D002335 ORTHO05D006282 1.4e-116 423.7 355 63.7
VMungo1309G0226 Vigna mungo HOM05D002335 ORTHO05D006282 4.0e-116 422.2 341 66.0
Cc06_g12190 Coffea canephora HOM05D002335 ORTHO05D006282 6.9e-116 421.4 346 70.2
Migut.J00924 Erythranthe guttata HOM05D002335 ORTHO05D006282 2.6e-115 419.5 340 66.2
Glyma.09G069700 Glycine max HOM05D002335 ORTHO05D006282 5.8e-115 418.3 341 68.6
TPR.G27760 Trifolium pratense HOM05D002335 ORTHO05D006282 5.8e-115 418.3 340 66.8
Phvul.009G227200 Phaseolus vulgaris HOM05D002335 ORTHO05D006282 7.6e-115 417.9 335 66.3
Thecc.09G076700 Theobroma cacao HOM05D002335 ORTHO05D006282 3.8e-114 415.6 353 67.4
Eucgr.C03328 Eucalyptus grandis HOM05D002335 ORTHO05D006282 6.4e-114 414.8 334 67.7
Lj6g0009960 Lotus japonicus HOM05D002335 ORTHO05D006282 1.4e-113 413.7 339 69.3
THA.LOC104815334 Tarenaya hassleriana HOM05D002335 ORTHO05D006282 1.9e-113 413.3 344 64.5
Zm00001eb256890 Zea mays HOM05D002335 ORTHO05D006282 1.9e-113 413.3 349 65.0
Duzib187G0696 Durio zibethinus HOM05D002335 ORTHO05D006282 4.2e-113 412.1 350 66.6
Sed0016034 Sechium edule HOM05D002335 ORTHO05D006282 5.4e-113 411.8 349 62.2
MD02G1091400 Malus domestica HOM05D002335 ORTHO05D006282 9.3e-113 411.0 339 68.7
Peaxi162Scf00928g00036 Petunia axillaris HOM05D002335 ORTHO05D006282 9.3e-113 411.0 324 66.0
ClCG03G015070 Citrullus lanatus HOM05D002335 ORTHO05D006282 3.5e-112 409.1 349 62.2
FAN26G1551 Fragaria x ananassa HOM05D002335 ORTHO05D006282 3.5e-112 409.1 334 69.5
Manes.16G095200 Manihot esculenta HOM05D002335 ORTHO05D006282 1.3e-111 407.1 337 63.2
FAN28G1803 Fragaria x ananassa HOM05D002335 ORTHO05D006282 3.0e-111 406.0 334 68.9
Duzib168G0796 Durio zibethinus HOM05D002335 ORTHO05D006282 1.1e-110 404.1 332 67.2
Carub.0003s2712 Capsella rubella HOM05D002335 ORTHO05D006282 1.5e-110 403.7 350 67.1
Actinidia29935 Actinidia chinensis HOM05D002335 ORTHO05D006282 1.9e-110 403.3 333 70.0
HanXRQChr04g0126011 Helianthus annuus HOM05D002335 ORTHO05D006282 3.3e-110 402.5 335 65.1
MSTRG.19458 Avicennia marina HOM05D002335 ORTHO05D006282 4.3e-110 402.1 344 67.7
Aa31sc133G10 Aethionema arabicum HOM05D002335 ORTHO05D006282 1.3e-109 400.6 335 62.4
BcaB06g26879 Brassica carinata HOM05D002335 ORTHO05D006282 1.3e-109 400.6 332 64.5
COL.COLO4_18096 Corchorus olitorius HOM05D002335 ORTHO05D006282 1.6e-109 400.2 350 67.1
Ca_02205_v3 Cicer arietinum L. HOM05D002335 ORTHO05D006282 2.8e-109 399.4 339 68.1
Sp3g24570 Schrenkiella parvula HOM05D002335 ORTHO05D006282 2.8e-109 399.4 337 68.8
AL3G43580 Arabidopsis lyrata HOM05D002335 ORTHO05D006282 8.1e-109 397.9 334 69.2
C07p09370 Brassica napus HOM05D002335 ORTHO05D006282 1.4e-108 397.1 329 64.1
BolC7t41360H Brassica oleracea HOM05D002335 ORTHO05D006282 1.4e-108 397.1 329 64.1
ECA236G4601 Erigeron canadensis HOM05D002335 ORTHO05D006282 1.8e-108 396.7 338 62.4
TWI34G0307 Tripterygium wilfordii HOM05D002335 ORTHO05D006282 1.8e-108 396.7 351 60.7
BcaC06g35950 Brassica carinata HOM05D002335 ORTHO05D006282 3.1e-108 396.0 339 62.8
A07p06320 Brassica napus HOM05D002335 ORTHO05D006282 4.0e-108 395.6 339 62.5
RcHm_v2.0_Chr2g0095141 Rosa chinensis HOM05D002335 ORTHO05D006282 2.6e-107 392.9 348 65.8
Medtr2g041690 Medicago truncatula HOM05D002335 ORTHO05D006282 4.5e-107 392.1 345 67.2
CANSAT56G2952 Cannabis sativa HOM05D002335 ORTHO05D006282 1.3e-106 390.6 349 65.9
Eucgr.C03263 Eucalyptus grandis HOM05D002335 ORTHO05D006282 1.3e-106 390.6 324 64.5
BraA07t28424Z Brassica rapa HOM05D002335 ORTHO05D006282 2.9e-106 389.4 345 61.4
Sabra18G0052300 Salix brachista HOM05D002335 ORTHO05D006282 3.8e-106 389.0 413 54.2
MD15G1217700 Malus domestica HOM05D002335 ORTHO05D006282 1.1e-105 387.5 321 69.2
AUR62028934 Chenopodium quinoa HOM05D002335 ORTHO05D006282 3.2e-105 386.0 351 60.4
EL10Ac8g19056 Beta vulgaris HOM05D002335 ORTHO05D006282 4.2e-105 385.6 379 58.0
Haze_26014 Corylus avellana HOM05D002335 ORTHO05D006282 3.5e-104 382.5 372 58.1
CsaV3_1G041060 Cucumis sativus L. HOM05D002335 ORTHO05D006282 7.9e-104 381.3 349 63.3
MELO3C015522.2 Cucumis melo HOM05D002335 ORTHO05D006282 1.0e-103 380.9 349 63.3
Nitab4.5_0011754g0010 Nicotiana tabacum HOM05D002335 ORTHO05D006282 1.9e-102 376.7 346 59.2
SGA_v2.0_scaffold308G48076 Striga asiatica HOM05D002335 ORTHO05D006282 2.5e-102 376.3 324 67.0
Thhalv10014003m.g Eutrema salsugineum HOM05D002335 ORTHO05D006282 7.4e-102 374.8 329 59.6
Lsat_1_v5_gn_8_86481 Lactuca sativa HOM05D002335 ORTHO05D006282 4.0e-100 369.0 339 58.7
Prupe.7G198700 Prunus persica HOM05D002335 ORTHO05D006282 6.9e-100 368.2 339 64.6
Manes.03G040500 Manihot esculenta HOM05D002335 ORTHO05D006282 1.2e-99 367.5 343 58.6
PGR044G1875 Punica granatum HOM05D002335 ORTHO05D006282 1.5e-99 367.1 306 70.6
Sp6g23900 Schrenkiella parvula HOM05D002335 ORTHO05D006282 2.0e-99 366.7 341 58.1
THA.LOC104799620 Tarenaya hassleriana HOM05D002335 ORTHO05D006282 2.0e-99 366.7 332 59.3
SalBow6G4624 Salvia bowleyana HOM05D002335 ORTHO05D006282 2.6e-99 366.3 312 63.1
C03p11680 Brassica napus HOM05D002335 ORTHO05D006282 3.4e-99 365.9 341 58.4
BraA03t10325Z Brassica rapa HOM05D002335 ORTHO05D006282 3.4e-99 365.9 341 58.4
Hund26035 Selenicereus undatus HOM05D002335 ORTHO05D006282 4.5e-99 365.5 298 65.1
Carub.0006s1891 Capsella rubella HOM05D002335 ORTHO05D006282 1.7e-98 363.6 338 58.0
Atru.chr7.1708 Acer truncatum HOM05D002335 ORTHO05D006282 4.9e-98 362.1 275 67.6
AL6G32120 Arabidopsis lyrata HOM05D002335 ORTHO05D006282 1.1e-97 360.9 337 57.9
AT5G20580 Arabidopsis thaliana HOM05D002335 ORTHO05D006282 1.9e-97 360.1 329 58.4
Lsat_1_v5_gn_7_35121 Lactuca sativa HOM05D002335 ORTHO05D006692 2.5e-97 359.8 335 64.8
CAN.G1661.12 Capsicum annuum HOM05D002335 ORTHO05D006282 4.6e-96 355.5 340 57.9
QL11p000781 Quercus lobata HOM05D002335 ORTHO05D006282 6.0e-96 355.1 370 60.0
AUR62025250 Chenopodium quinoa HOM05D002335 ORTHO05D006282 1.3e-95 354.0 333 58.9
Sopen07g021360 Solanum pennellii HOM05D002335 ORTHO05D006282 5.1e-95 352.1 332 63.3
Psat1g134320 Pisum sativum HOM05D002335 ORTHO05D006282 4.3e-94 349.0 271 73.4
CARHR103630 Cardamine hirsuta HOM05D002335 ORTHO05D006282 5.7e-94 348.6 294 69.7
arahy.Tifrunner.gnm1.ann1.UHGN3W Arachis hypogaea HOM05D002335 ORTHO05D006282 3.4e-91 339.3 330 62.7
SEGI_06962 Sequoiadendron giganteum HOM05D002335 ORTHO05D006282 7.6e-91 338.2 340 52.9
AT2G06005 Arabidopsis thaliana HOM05D002335 ORTHO05D006282 2.9e-90 336.3 283 70.0
vmacro06343 Vaccinium macrocarpon HOM05D002335 ORTHO05D006282 1.1e-89 334.3 395 54.2
TWI63G1279 Tripterygium wilfordii HOM05D002335 ORTHO05D006282 1.6e-88 330.5 349 59.9
BolC3t13639H Brassica oleracea HOM05D005537 ORTHO05D006776 5.7e-86 322.0 295 59.3
CARHR192220 Cardamine hirsuta HOM05D002335 ORTHO05D006282 7.4e-86 321.6 292 59.6
Rhsim03G0227400 Rhododendron simsii HOM05D002335 ORTHO05D005129 6.3e-85 318.5 387 56.3
Nitab4.5_0000073g0170 Nicotiana tabacum HOM05D002335 ORTHO05D006282 3.4e-83 312.8 400 47.0
Psat3g025000 Pisum sativum HOM05D002335 ORTHO05D006282 1.0e-82 311.2 242 66.5
Cpa.g.sc28.33 Carica papaya HOM05D002335 ORTHO05D006282 2.9e-82 309.7 226 68.6
Sc18g0002560 Simmondsia chinensis HOM05D002335 ORTHO05D006282 1.3e-77 294.3 245 71.0
CDE02G0868 Ceratophyllum demersum HOM05D002335 ORTHO05D006282 2.2e-74 283.5 234 63.7
SHI23809 Sapria himalayana HOM05D002335 ORTHO05D006282 3.8e-74 282.7 235 64.3
Aa31LG1G14100 Aethionema arabicum HOM05D002335 ORTHO05D006282 2.1e-72 276.9 437 42.3
FAN23G1616 Fragaria x ananassa HOM05D002335 ORTHO05D006282 1.4e-71 274.2 240 64.2
Nitab4.5_0009436g0040 Nicotiana tabacum HOM05D002335 ORTHO05D006282 4.4e-70 269.2 408 43.9
Lj7C687T14 Lonicera japonica HOM05D002335 ORTHO05D006282 3.7e-69 266.2 259 58.7
CAN.G404.48 Capsicum annuum HOM05D002335 ORTHO05D006282 1.3e-66 257.7 303 50.5
Peaxi162Scf00127g01814 Petunia axillaris HOM05D002335 ORTHO05D006282 3.6e-64 249.6 236 61.0
Pp3c22_13730 Physcomitrium patens HOM05D002335 ORTHO05D006282 6.7e-63 245.4 328 45.1
Mapoly0011s0025 Marchantia polymorpha HOM05D002335 ORTHO05D006282 8.8e-63 245.0 324 44.4
Lalb_Chr23g0276371 Lupinus albus HOM05D002335 ORTHO05D006282 9.1e-60 235.0 201 60.2
arahy.Tifrunner.gnm1.ann1.3UYF95 Arachis hypogaea HOM05D002335 ORTHO05D006282 2.2e-58 230.3 213 56.8
Lalb_Chr07g0181191 Lupinus albus HOM05D002335 ORTHO05D006282 1.1e-57 228.0 231 52.8
DCAR_028335 Daucus carota HOM05D002335 ORTHO05D006282 1.5e-57 227.6 191 69.6
Pp3c2_6470 Physcomitrium patens HOM05D002335 ORTHO05D006282 1.2e-56 224.6 330 41.2
Actinidia38482 Actinidia chinensis HOM05D002335 ORTHO05D006282 3.4e-46 189.9 145 65.5
Lalb_Chr23g0276381 Lupinus albus HOM05D002335 ORTHO05D006282 6.1e-40 169.1 136 68.4
MD02G1091600 Malus domestica HOM05D002335 ORTHO05D006282 1.4e-39 167.9 136 58.8
SMO358G0254 Selaginella moellendorffii HOM05D002335 ORTHO05D006282 2.3e-39 167.2 202 48.5
Lalb_Chr07g0181181 Lupinus albus HOM05D002335 ORTHO05D006282 3.0e-39 166.8 160 68.8
Nitab4.5_0000343g0220 Nicotiana tabacum HOM05D002335 ORTHO05D006282 4.9e-37 159.5 129 64.3
AagrBONN_evm.TU.Sc2ySwM_344.5493 Anthoceros agrestis HOM05D002335 ORTHO05D006282 3.4e-30 136.7 307 32.9
Actinidia38481 Actinidia chinensis HOM05D002335 ORTHO05D006282 1.0e-26 125.2 121 75.2
Cpa.g.sc28.37 Carica papaya HOM05D002335 ORTHO05D006282 8.3e-21 105.5 98 62.2
Nitab4.5_0000343g0210 Nicotiana tabacum HOM05D002335 ORTHO05D006282 2.4e-20 104.0 97 60.8
CBR_g26318 Chara braunii HOM05D002335 ORTHO05D006282 3.2e-20 103.6 229 31.4
Solyc07g041890.1 Solanum lycopersicum HOM05D002335 ORTHO05D006282 1.6e-19 101.3 180 40.6
Medtr2g041390 Medicago truncatula HOM05D002335 ORTHO05D006282 4.7e-16 89.7 106 68.9
Oeu011491.2 Olea europaea HOM05D002335 ORTHO05D006282 9.9e-14 82.0 78 55.1
Psat6g064600 Pisum sativum HOM05D004726 ORTHO05D005986 1.1e-12 78.6 49 79.6
arahy.Tifrunner.gnm1.ann1.HK8DFN Arachis hypogaea HOM05D002335 ORTHO05D006282 4.1e-12 76.6 90 46.7
Oeu031390.1 Olea europaea HOM05D002335 ORTHO05D006282 7.8e-11 72.4 50 68.0
Ah.14g084930 Amaranthus hybridus HOM05D002335 ORTHO05D006282 4.3e-09 66.6 87 47.1


User provided reference genes

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