Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_004345 Vanilla planifolia HOM05D030214 ORTHO05D030715 1.7e-122 442.6 214 100.0
HPP92_004338 Vanilla planifolia HOM05D000036 ORTHO05D000095 2.2e-32 143.3 162 54.3
HPP92_004354 Vanilla planifolia HOM05D030214 ORTHO05D030715 6.0e-30 135.2 72 91.7
HPP92_002371 Vanilla planifolia HOM05D030214 ORTHO05D030715 7.1e-15 85.1 71 56.3
HPP92_027598 Vanilla planifolia HOM05D030214 ORTHO05D030715 7.1e-15 85.1 71 56.3
QL04p039044 Quercus lobata HOM05D000036 ORTHO05D000095 8.1e-11 71.6 139 35.3
Gohir.A06G084500 Gossypium hirsutum HOM05D000036 ORTHO05D000095 1.8e-10 70.5 140 35.7
MD02G1104500 Malus domestica HOM05D000036 ORTHO05D000095 5.2e-10 68.9 145 34.5
Gorai.010G095000 Gossypium raimondii HOM05D000036 ORTHO05D000095 8.9e-10 68.2 140 35.0
Gohir.D06G081600 Gossypium hirsutum HOM05D000036 ORTHO05D000095 1.2e-09 67.8 140 35.0
Thecc.09G068600 Theobroma cacao HOM05D000036 ORTHO05D000095 1.5e-09 67.4 139 33.8
SalBow6G5347 Salvia bowleyana HOM05D000036 ORTHO05D000095 2.0e-09 67.0 141 37.6
Haze_26078 Corylus avellana HOM05D000036 ORTHO05D000095 3.4e-09 66.2 138 36.2
TWI32G0922 Tripterygium wilfordii HOM05D000036 ORTHO05D000095 7.6e-09 65.1 142 34.5
MSTRG.19422 Avicennia marina HOM05D000036 ORTHO05D000095 9.9e-09 64.7 140 34.3
Duzib168G0583 Durio zibethinus HOM05D000036 ORTHO05D000095 9.9e-09 64.7 138 33.3
Cc00_g13740 Coffea canephora HOM05D000036 ORTHO05D000095 1.3e-08 64.3 145 35.2
RcHm_v2.0_Chr2g0096441 Rosa chinensis HOM05D000036 ORTHO05D000095 1.3e-08 64.3 136 32.4
Duzib150G1657 Durio zibethinus HOM05D000036 ORTHO05D000095 1.7e-08 63.9 140 34.3
Sc18g0002890 Simmondsia chinensis HOM05D000036 ORTHO05D000095 1.7e-08 63.9 136 35.3
PSO724G0969 Papaver somniferum HOM05D000036 ORTHO05D000095 2.2e-08 63.5 146 33.6
MD15G1224800 Malus domestica HOM05D000036 ORTHO05D000095 2.9e-08 63.2 138 34.8
Cfa002931 Carpinus fangiana HOM05D000036 ORTHO05D000095 4.9e-08 62.4 136 34.6
CANSAT40G0002 Cannabis sativa HOM05D000036 ORTHO05D000095 6.4e-08 62.0 81 43.2
CANSAT56G1363 Cannabis sativa HOM05D000036 ORTHO05D000095 6.4e-08 62.0 81 43.2
Migut.J00873 Erythranthe guttata HOM05D000036 ORTHO05D000095 1.1e-07 61.2 87 42.5
PSO135G0513 Papaver somniferum HOM05D000036 ORTHO05D000095 1.1e-07 61.2 147 34.0
Dinv25497 Davidia involucrata HOM05D000036 ORTHO05D000095 1.4e-07 60.8 138 34.1
Rhsim05G0001500 Rhododendron simsii HOM05D000036 ORTHO05D000095 1.4e-07 60.8 144 31.9
Thhalv10011371m.g Eutrema salsugineum HOM05D000036 ORTHO05D000095 2.4e-07 60.1 146 30.8
Gorai.013G221800 Gossypium raimondii HOM05D000036 ORTHO05D000095 2.4e-07 60.1 136 35.3
CDE07G0068 Ceratophyllum demersum HOM05D000036 ORTHO05D000095 4.2e-07 59.3 138 31.2
Ciclev10007940m.g Citrus clementina HOM05D000036 ORTHO05D000095 4.2e-07 59.3 83 42.2
Ciclev10007942m.g Citrus clementina HOM05D000036 ORTHO05D000095 4.2e-07 59.3 83 42.2
Manes.16G089200 Manihot esculenta HOM05D000036 ORTHO05D000095 4.2e-07 59.3 71 45.1
CSS0036591 Camellia sinensis var. sinensis HOM05D000036 ORTHO05D000095 9.3e-07 58.2 148 33.8
unitig_749.g14188 Utricularia gibba HOM05D000036 ORTHO05D000095 1.2e-06 57.8 139 34.5
vmacro17073 Vaccinium macrocarpon HOM05D000036 ORTHO05D000095 1.2e-06 57.8 144 30.6
Gohir.D13G195700 Gossypium hirsutum HOM05D000036 ORTHO05D000095 1.6e-06 57.4 134 34.3
Manes.02G011700 Manihot esculenta HOM05D000036 ORTHO05D000095 1.6e-06 57.4 143 31.5
Carub.0004s0634 Capsella rubella HOM05D000036 ORTHO05D000095 2.1e-06 57.0 149 31.5
Oeu010851.1 Olea europaea HOM05D000036 ORTHO05D000095 2.1e-06 57.0 67 41.8
Prupe.7G190400 Prunus persica HOM05D000036 ORTHO05D000095 2.1e-06 57.0 66 47.0
QL04p039098 Quercus lobata HOM05D000036 ORTHO05D000095 2.1e-06 57.0 147 31.3
Zm00001eb374140 Zea mays HOM05D000036 ORTHO05D000095 2.1e-06 57.0 54 50.0
Ah.14g084660 Amaranthus hybridus HOM05D000036 ORTHO05D000095 2.7e-06 56.6 56 42.9
AT2G26440 Arabidopsis thaliana HOM05D000036 ORTHO05D000095 2.7e-06 56.6 72 43.1
CARHR118350 Cardamine hirsuta HOM05D000036 ORTHO05D000095 2.7e-06 56.6 70 42.9
GSVIVG01015000001 Vitis vinifera HOM05D000036 ORTHO05D000095 3.5e-06 56.2 146 32.9
THA.LOC104803700 Tarenaya hassleriana HOM05D000036 ORTHO05D000095 4.6e-06 55.8 107 36.4
FvH4_1g09580 Fragaria vesca HOM05D000036 ORTHO05D000095 6.0e-06 55.5 136 30.1
FAN26G2514 Fragaria x ananassa HOM05D000036 ORTHO05D000095 6.0e-06 55.5 136 30.1
BcaB01g03022 Brassica carinata HOM05D000036 ORTHO05D000095 7.8e-06 55.1 52 50.0
BolC3t15570H Brassica oleracea HOM05D000036 ORTHO05D000095 7.8e-06 55.1 52 50.0
QL04p039030 Quercus lobata HOM05D000036 ORTHO05D000095 7.8e-06 55.1 141 30.5


User provided reference genes

Program Settings