Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_004304 Vanilla planifolia HOM05D006515 ORTHO05D008125 5.2e-159 564.3 281 100.0
HPP92_004318 Vanilla planifolia HOM05D006515 ORTHO05D008125 1.1e-44 184.5 208 57.2
Nn5g28914 Nelumbo nucifera HOM05D006515 ORTHO05D008125 7.3e-36 155.2 264 42.8
MBI02_g20709_MAGBIO Magnolia biondii HOM05D006515 ORTHO05D008125 9.5e-36 154.8 208 48.6
MBI02_g45733_MAGBIO Magnolia biondii HOM05D006515 ORTHO05D008125 9.5e-36 154.8 208 48.6
CANSAT01G1885 Cannabis sativa HOM05D006515 ORTHO05D008125 2.8e-35 153.3 194 50.5
CiPaw.04G091900 Carya illinoinensis HOM05D006515 ORTHO05D008125 8.1e-35 151.8 208 48.1
TAR628G1388 Trochodendron aralioides HOM05D006515 ORTHO05D008125 8.1e-35 151.8 207 48.8
Haze_25038 Corylus avellana HOM05D006515 ORTHO05D008125 1.1e-34 151.4 208 47.6
MELO3C020948.2 Cucumis melo HOM05D006515 ORTHO05D008125 1.4e-34 151.0 207 47.3
CsaV3_2G017540 Cucumis sativus L. HOM05D006515 ORTHO05D008125 1.4e-34 151.0 207 47.3
Oeu028372.3 Olea europaea HOM05D006515 ORTHO05D008125 1.4e-34 151.0 263 41.8
Sed0016096 Sechium edule HOM05D006515 ORTHO05D008125 1.4e-34 151.0 207 47.3
TWI74G0473 Tripterygium wilfordii HOM05D006515 ORTHO05D008125 1.8e-34 150.6 264 41.3
MSTRG.2534 Avicennia marina HOM05D006515 ORTHO05D008125 2.4e-34 150.2 266 39.8
COL.COLO4_11014 Corchorus olitorius HOM05D006515 ORTHO05D008125 3.1e-34 149.8 208 46.6
Cfa002752 Carpinus fangiana HOM05D006515 ORTHO05D008125 4.0e-34 149.4 208 47.1
Ca_17696_v3 Cicer arietinum L. HOM05D006515 ORTHO05D008125 4.0e-34 149.4 272 40.8
Phvul.002G264700 Phaseolus vulgaris HOM05D006515 ORTHO05D008125 4.0e-34 149.4 208 47.1
Psat7g051400 Pisum sativum HOM05D006515 ORTHO05D008125 4.0e-34 149.4 208 47.6
TPR.G2156 Trifolium pratense HOM05D006515 ORTHO05D008125 4.0e-34 149.4 208 47.6
ATR0564G276 Amborella trichopoda HOM05D000080 ORTHO05D008125 5.2e-34 149.1 230 43.9
TPR.G34384 Trifolium pratense HOM05D006515 ORTHO05D008125 5.2e-34 149.1 208 47.6
arahy.Tifrunner.gnm1.ann1.L5WCB3 Arachis hypogaea HOM05D006515 ORTHO05D008125 6.8e-34 148.7 207 47.3
Eucgr.I00323 Eucalyptus grandis HOM05D006515 ORTHO05D008125 6.8e-34 148.7 264 40.9
Glyma.08G141400 Glycine max HOM05D006515 ORTHO05D008125 6.8e-34 148.7 208 47.1
Nitab4.5_0000431g0160 Nicotiana tabacum HOM05D006515 ORTHO05D008125 6.8e-34 148.7 265 40.8
Rhsim08G0006500 Rhododendron simsii HOM05D006515 ORTHO05D008125 6.8e-34 148.7 208 46.6
Manes.12G142600 Manihot esculenta HOM05D006515 ORTHO05D008125 8.9e-34 148.3 264 40.9
VMungo0251G1698 Vigna mungo HOM05D006515 ORTHO05D008125 8.9e-34 148.3 208 47.1
Zm00001eb069020 Zea mays HOM05D006515 ORTHO05D008125 8.9e-34 148.3 207 46.9
Migut.H02429 Erythranthe guttata HOM05D006515 ORTHO05D008125 1.2e-33 147.9 208 47.1
GSVIVG01022225001 Vitis vinifera HOM05D006515 ORTHO05D008125 1.2e-33 147.9 206 47.6
QL06p032194 Quercus lobata HOM05D006515 ORTHO05D008125 1.5e-33 147.5 208 47.1
EL10Ac6g14754 Beta vulgaris HOM05D006515 ORTHO05D008125 2.0e-33 147.1 207 46.4
Carub.0004s0110 Capsella rubella HOM05D006515 ORTHO05D008125 2.0e-33 147.1 271 40.2
Duzib264G0250 Durio zibethinus HOM05D006515 ORTHO05D008125 2.0e-33 147.1 208 46.6
ECA238G1556 Erigeron canadensis HOM05D006515 ORTHO05D008125 2.0e-33 147.1 264 41.3
HanXRQChr15g0484391 Helianthus annuus HOM05D006515 ORTHO05D008125 2.0e-33 147.1 207 46.9
MD15G1333200 Malus domestica HOM05D006515 ORTHO05D008125 2.0e-33 147.1 208 46.6
Nitab4.5_0013619g0010 Nicotiana tabacum HOM05D005315 ORTHO05D008125 2.0e-33 147.1 208 46.6
Potri.005G084400 Populus trichocarpa HOM05D006515 ORTHO05D008125 2.0e-33 147.1 208 46.6
Sabra05G0069400 Salix brachista HOM05D006515 ORTHO05D008125 2.0e-33 147.1 208 46.2
Sp4g01040 Schrenkiella parvula HOM05D006515 ORTHO05D008125 2.0e-33 147.1 231 43.3
Lalb_Chr12g0203541 Lupinus albus HOM05D006515 ORTHO05D008125 3.4e-33 146.4 207 46.9
CAN.G1056.2 Capsicum annuum HOM05D006515 ORTHO05D008125 4.4e-33 146.0 208 46.6
Gorai.003G047200 Gossypium raimondii HOM05D006515 ORTHO05D008125 5.8e-33 145.6 208 45.7
Cpa.g.sc196.13 Carica papaya HOM05D006515 ORTHO05D008125 7.6e-33 145.2 207 46.4
FvH4_1g22260 Fragaria vesca HOM05D006515 ORTHO05D008125 7.6e-33 145.2 207 45.9
Solyc04g011900.4 Solanum lycopersicum HOM05D006515 ORTHO05D008125 7.6e-33 145.2 264 40.5
Sopen04g006040 Solanum pennellii HOM05D006515 ORTHO05D008125 7.6e-33 145.2 264 40.5
CSS0008392 Camellia sinensis var. sinensis HOM05D006515 ORTHO05D008125 9.9e-33 144.8 264 40.5
Thhalv10000230m.g Eutrema salsugineum HOM05D006515 ORTHO05D008125 9.9e-33 144.8 207 45.9
RcHm_v2.0_Chr2g0116401 Rosa chinensis HOM05D006515 ORTHO05D008125 9.9e-33 144.8 207 45.4
SalBow6G3287 Salvia bowleyana HOM05D006515 ORTHO05D008125 9.9e-33 144.8 262 40.1
PGSC0003DMG400023598 Solanum tuberosum HOM05D006515 ORTHO05D008125 9.9e-33 144.8 208 46.2
AT2G21960 Arabidopsis thaliana HOM05D006515 ORTHO05D008125 1.3e-32 144.4 207 45.4
CARHR113040 Cardamine hirsuta HOM05D006515 ORTHO05D008125 1.3e-32 144.4 264 39.8
Ciclev10026110m.g Citrus clementina HOM05D006515 ORTHO05D008125 1.3e-32 144.4 264 40.2
AL4G11280 Arabidopsis lyrata HOM05D006515 ORTHO05D008125 1.7e-32 144.1 207 45.4
FAN19G0752 Fragaria x ananassa HOM05D006515 ORTHO05D008125 1.7e-32 144.1 212 44.3
Gohir.D03G046000 Gossypium hirsutum HOM05D006515 ORTHO05D008125 1.7e-32 144.1 208 45.2
Peaxi162Scf00133g01415 Petunia axillaris HOM05D006515 ORTHO05D008125 1.7e-32 144.1 208 46.2
PGR004G2121 Punica granatum HOM05D006515 ORTHO05D008125 1.7e-32 144.1 207 45.9
Atru.chr4.394 Acer truncatum HOM05D006515 ORTHO05D008125 2.2e-32 143.7 264 39.8
Aqoxy6G00481 Aquilegia oxysepala HOM05D006515 ORTHO05D008125 2.9e-32 143.3 211 44.1
BcaC02g08749 Brassica carinata HOM05D006515 ORTHO05D008125 2.9e-32 143.3 201 46.3
BolC4t26701H Brassica oleracea HOM05D006515 ORTHO05D008125 2.9e-32 143.3 201 46.3
CSS0014645 Camellia sinensis var. sinensis HOM05D006515 ORTHO05D008125 2.9e-32 143.3 264 40.2
BraA04t17291Z Brassica rapa HOM05D006515 ORTHO05D008125 3.8e-32 142.9 201 46.3
Sc07g0001530 Simmondsia chinensis HOM05D006515 ORTHO05D008125 3.8e-32 142.9 208 44.7
Lj4g0022266 Lotus japonicus HOM05D006515 ORTHO05D008125 4.9e-32 142.5 208 45.2
Hund19656 Selenicereus undatus HOM05D006515 ORTHO05D008125 4.9e-32 142.5 208 44.2
BcaB06g27799 Brassica carinata HOM05D006515 ORTHO05D008125 6.4e-32 142.1 201 46.3
THA.LOC104807722 Tarenaya hassleriana HOM05D006515 ORTHO05D008125 6.4e-32 142.1 207 44.9
Cc07_g16230 Coffea canephora HOM05D006515 ORTHO05D008125 8.4e-32 141.7 208 44.7
AUR62003307 Chenopodium quinoa HOM05D006515 ORTHO05D008125 1.4e-31 141.0 203 44.8
Thecc.01G112600 Theobroma cacao HOM05D006515 ORTHO05D008125 1.4e-31 141.0 208 44.7
A04p16560 Brassica napus HOM05D006515 ORTHO05D008125 1.9e-31 140.6 201 45.8
AUR62016278 Chenopodium quinoa HOM05D006515 ORTHO05D008125 1.9e-31 140.6 267 40.1
unitig_899.g15001 Utricularia gibba HOM05D006515 ORTHO05D008125 1.9e-31 140.6 263 38.4
Aa31LG7G14680 Aethionema arabicum HOM05D006515 ORTHO05D008125 2.4e-31 140.2 207 44.4
PSO541G0558 Papaver somniferum HOM05D006515 ORTHO05D008125 9.2e-31 138.3 208 45.2
PSO675G2678 Papaver somniferum HOM05D006515 ORTHO05D008125 6.0e-30 135.6 208 44.7
DCAR_010076 Daucus carota HOM05D006515 ORTHO05D008125 1.0e-29 134.8 231 40.7
FAN28G2568 Fragaria x ananassa HOM05D006515 ORTHO05D008125 1.3e-29 134.4 241 39.8
Lj4A877G29 Lonicera japonica HOM05D006515 ORTHO05D008125 1.3e-29 134.4 199 45.2
Actinidia28893 Actinidia chinensis HOM05D006515 ORTHO05D008125 1.7e-29 134.0 194 46.4
C04p51080 Brassica napus HOM05D006515 ORTHO05D008125 1.7e-29 134.0 214 43.5
SMO356G0225 Selaginella moellendorffii HOM05D006515 ORTHO05D008125 2.3e-29 133.7 207 43.0
Rhsim08G0007200 Rhododendron simsii HOM05D006515 ORTHO05D008125 1.9e-28 130.6 255 37.6
Dinv19488 Davidia involucrata HOM05D006515 ORTHO05D008125 1.4e-26 124.4 211 42.7
Duzib264G0715 Durio zibethinus HOM05D006515 ORTHO05D008125 1.4e-26 124.4 149 51.0
Gohir.A02G135100 Gossypium hirsutum HOM05D006515 ORTHO05D008125 1.8e-26 124.0 149 51.0
ClCG02G013380 Citrullus lanatus HOM05D006515 ORTHO05D008125 2.4e-26 123.6 188 46.3
CSS0013135 Camellia sinensis var. sinensis HOM05D006515 ORTHO05D008125 4.0e-26 122.9 205 42.0
CSS0007670 Camellia sinensis var. sinensis HOM05D006515 ORTHO05D008125 5.2e-26 122.5 149 50.3
Prupe.6G173100 Prunus persica HOM05D006515 ORTHO05D008125 9.0e-26 121.7 149 50.3
arahy.Tifrunner.gnm1.ann1.M7EXEZ Arachis hypogaea HOM05D006515 ORTHO05D008125 1.2e-25 121.3 188 45.7
Mapoly0125s0032 Marchantia polymorpha HOM05D006515 ORTHO05D008125 4.4e-25 119.4 206 39.3
AagrBONN_evm.TU.Sc2ySwM_344.4911 Anthoceros agrestis HOM05D006515 ORTHO05D008125 5.8e-25 119.0 208 38.9
Lsat_1_v5_gn_1_15020 Lactuca sativa HOM05D006515 ORTHO05D008125 4.9e-24 115.9 246 39.0
FAN23G2782 Fragaria x ananassa HOM05D006515 ORTHO05D008125 3.2e-23 113.2 212 41.0
CDE04G2335 Ceratophyllum demersum HOM05D006515 ORTHO05D008125 1.3e-19 101.3 148 43.9
Pp3c15_14640 Physcomitrium patens HOM05D006515 ORTHO05D008125 8.1e-19 98.6 203 36.5
Glyma.05G183600 Glycine max HOM05D006515 ORTHO05D008125 1.8e-18 97.4 124 50.0
Os04g0639300 Oryza sativa ssp. japonica HOM05D006515 ORTHO05D008125 2.4e-18 97.1 74 70.3
vmacro18632 Vaccinium macrocarpon HOM05D006515 ORTHO05D008125 1.5e-17 94.4 74 67.6
Ah.02g125970 Amaranthus hybridus HOM05D006515 ORTHO05D008125 2.0e-17 94.0 180 37.2
SGA_v2.0_scaffold51G18748 Striga asiatica HOM05D006515 ORTHO05D008125 1.2e-14 84.7 121 44.6
MD01G1019300 Malus domestica HOM05D006515 ORTHO05D008125 3.0e-13 80.1 71 63.4
Cre08.g379200 Chlamydomonas reinhardtii HOM05D006515 ORTHO05D008125 3.7e-11 73.2 149 31.5
PRCOL_00002642 Prasinoderma coloniale HOM05D006515 ORTHO05D008125 2.4e-10 70.5 151 34.4
SEGI_30317 Sequoiadendron giganteum HOM05D006515 ORTHO05D008125 5.5e-07 59.3 77 44.2
vmacro18633 Vaccinium macrocarpon HOM05D006515 ORTHO05D008125 5.5e-07 59.3 82 46.3
Cre08.g379175 Chlamydomonas reinhardtii HOM05D006515 ORTHO05D008125 1.2e-06 58.2 72 37.5
MBI06_g27505_MAGBIO Magnolia biondii HOM05D006515 ORTHO05D008125 4.6e-06 56.2 53 56.6


User provided reference genes

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