Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_004286 Vanilla planifolia HOM05D003496 ORTHO05D003909 0.0e+00 1448.7 836 100.0
Aqoxy6G00790 Aquilegia oxysepala HOM05D003496 ORTHO05D003909 1.8e-159 567.4 846 46.0
Sabra02G0075900 Salix brachista HOM05D003496 ORTHO05D003909 5.7e-153 545.8 854 42.3
Zm00001eb423930 Zea mays HOM05D003496 ORTHO05D003909 3.2e-148 530.0 854 40.9
CAN.G101.20 Capsicum annuum HOM05D003496 ORTHO05D003909 1.2e-147 528.1 847 41.7
vmacro18796 Vaccinium macrocarpon HOM05D003496 ORTHO05D003909 1.0e-146 525.0 856 45.1
MD15G1368600 Malus domestica HOM05D003496 ORTHO05D003909 8.8e-146 521.9 846 44.8
TWI12G1339 Tripterygium wilfordii HOM05D003496 ORTHO05D003909 2.6e-145 520.4 846 44.4
Dinv44773 Davidia involucrata HOM05D003496 ORTHO05D003909 5.7e-145 519.2 840 40.8
GSVIVG01009028001 Vitis vinifera HOM05D003496 ORTHO05D003909 1.7e-144 517.7 844 45.3
Os04g0452500 Oryza sativa ssp. japonica HOM05D003496 ORTHO05D003909 2.2e-144 517.3 850 42.2
Glyma.13G089100 Glycine max HOM05D003496 ORTHO05D003909 7.0e-143 512.3 852 40.1
Ciclev10000237m.g Citrus clementina HOM05D003496 ORTHO05D003909 5.6e-140 502.7 849 44.1
CSS0008540 Camellia sinensis var. sinensis HOM05D003496 ORTHO05D003909 2.1e-139 500.7 855 43.2
DCAR_031330 Daucus carota HOM05D003496 ORTHO05D003909 3.6e-139 500.0 858 38.6
Psat2g073040 Pisum sativum HOM05D003496 ORTHO05D003909 4.7e-139 499.6 848 42.8
THA.LOC104810802 Tarenaya hassleriana HOM05D003496 ORTHO05D003909 2.3e-138 497.3 851 39.6
TAR628G0803 Trochodendron aralioides HOM05D003496 ORTHO05D003909 6.8e-138 495.7 845 44.0
Manes.18G067700 Manihot esculenta HOM05D003496 ORTHO05D003909 8.9e-138 495.4 845 43.9
Atru.chr13.1191 Acer truncatum HOM05D003496 ORTHO05D003909 1.7e-136 491.1 847 44.0
Atru.chr13.1193 Acer truncatum HOM05D003496 ORTHO05D003909 1.7e-136 491.1 847 44.0
vmacro13001 Vaccinium macrocarpon HOM05D003496 ORTHO05D003909 1.7e-136 491.1 861 43.7
Potri.002G096400 Populus trichocarpa HOM05D003496 ORTHO05D003909 2.0e-134 484.2 801 40.2
Eucgr.F00323 Eucalyptus grandis HOM05D003496 ORTHO05D003909 2.7e-134 483.8 860 41.3
Cfa013633 Carpinus fangiana HOM05D003496 ORTHO05D003909 7.8e-134 482.3 847 41.4
Thecc.08G107000 Theobroma cacao HOM05D003496 ORTHO05D003909 1.5e-132 478.0 845 43.8
Oeu046297.1 Olea europaea HOM05D003496 ORTHO05D003909 1.9e-132 477.6 810 40.7
TWI56G0580 Tripterygium wilfordii HOM05D003496 ORTHO05D003909 1.6e-131 474.6 846 42.4
Gohir.A05G226500 Gossypium hirsutum HOM05D003496 ORTHO05D003909 8.0e-131 472.2 846 43.4
Gohir.D05G229200 Gossypium hirsutum HOM05D003496 ORTHO05D003909 1.8e-130 471.1 846 43.0
RcHm_v2.0_Chr7g0243631 Rosa chinensis HOM05D003496 ORTHO05D003909 1.8e-130 471.1 850 40.9
Nn1g05352 Nelumbo nucifera HOM05D003496 ORTHO05D003909 8.9e-130 468.8 810 43.6
Gorai.009G237200 Gossypium raimondii HOM05D003496 ORTHO05D003909 1.2e-129 468.4 846 43.0
Actinidia27185 Actinidia chinensis HOM05D003496 ORTHO05D003909 3.4e-129 466.8 854 42.3
FAN18G3881 Fragaria x ananassa HOM05D003496 ORTHO05D003909 1.3e-128 464.9 855 40.4
CANSAT25G1637 Cannabis sativa HOM05D003496 ORTHO05D003909 2.9e-128 463.8 846 39.2
ATR0782G233 Amborella trichopoda HOM05D003496 ORTHO05D003909 3.7e-128 463.4 845 42.6
PSO832G0815 Papaver somniferum HOM05D003496 ORTHO05D003909 3.7e-128 463.4 860 41.7
FvH4_5g37341 Fragaria vesca HOM05D003496 ORTHO05D003909 5.4e-127 459.5 847 40.1
PGR042G0634 Punica granatum HOM05D003496 ORTHO05D003909 7.0e-127 459.1 851 41.5
PSO063G1836 Papaver somniferum HOM05D003496 ORTHO05D003909 3.5e-126 456.8 860 40.9
Migut.C01172 Erythranthe guttata HOM05D003496 ORTHO05D003909 3.0e-125 453.8 845 41.1
Hund16907 Selenicereus undatus HOM05D003496 ORTHO05D003909 2.5e-124 450.7 852 39.6
CiPaw.08G045100 Carya illinoinensis HOM05D003496 ORTHO05D003909 2.3e-122 444.1 825 42.7
Hund16910 Selenicereus undatus HOM05D003496 ORTHO05D003909 6.8e-122 442.6 852 39.2
Lj1g0018735 Lotus japonicus HOM05D003496 ORTHO05D003909 8.9e-122 442.2 853 40.7
Sopen04g029300 Solanum pennellii HOM05D003496 ORTHO05D003909 7.5e-121 439.1 848 40.1
Phvul.008G173500 Phaseolus vulgaris HOM05D003496 ORTHO05D003909 9.8e-121 438.7 851 40.9
RcHm_v2.0_Chr7g0239001 Rosa chinensis HOM05D003496 ORTHO05D003909 9.8e-121 438.7 850 39.2
SGA_v2.0_scaffold24G10490 Striga asiatica HOM05D003496 ORTHO05D003909 3.7e-120 436.8 868 40.3
FAN08G2234 Fragaria x ananassa HOM05D003496 ORTHO05D003909 1.1e-119 435.3 861 38.4
Lj5C255G21 Lonicera japonica HOM05D003496 ORTHO05D003909 1.6e-118 431.4 845 38.9
Prupe.1G516800 Prunus persica HOM05D003496 ORTHO05D003909 1.3e-117 428.3 846 41.8
FvH4_6g40021 Fragaria vesca HOM05D003496 ORTHO05D003909 5.6e-116 422.9 841 38.5
Cc10_g07230 Coffea canephora HOM05D003496 ORTHO05D003909 2.1e-115 421.0 847 37.5
Ah.05g169990 Amaranthus hybridus HOM05D003496 ORTHO05D003909 6.2e-115 419.5 849 38.6
HanXRQChr13g0402471 Helianthus annuus HOM05D003496 ORTHO05D003909 8.1e-115 419.1 850 36.0
Sed0000627 Sechium edule HOM05D003496 ORTHO05D003909 1.1e-114 418.7 835 39.9
CsaV3_3G048690 Cucumis sativus L. HOM05D003496 ORTHO05D003909 1.8e-114 417.9 848 41.3
EL10Ac1g01221 Beta vulgaris HOM05D003496 ORTHO05D003909 9.9e-113 412.1 851 38.3
PGSC0003DMG400006412 Solanum tuberosum HOM05D003496 ORTHO05D003909 2.9e-112 410.6 845 38.5
Medtr5g063730 Medicago truncatula HOM05D003496 ORTHO05D003909 1.6e-110 404.8 883 37.1
QL12p036753 Quercus lobata HOM05D003496 ORTHO05D003909 1.3e-109 401.7 846 39.5
MSTRG.1476 Avicennia marina HOM05D003496 ORTHO05D003909 1.7e-109 401.4 711 39.4
vmacro18810 Vaccinium macrocarpon HOM05D003496 ORTHO05D003909 3.0e-109 400.6 826 40.2
ClCG11G015270 Citrullus lanatus HOM05D003496 ORTHO05D003909 3.6e-107 393.7 835 41.2
Oeu012925.3 Olea europaea HOM05D003496 ORTHO05D003909 3.6e-107 393.7 974 37.7
AT1G22275 Arabidopsis thaliana HOM05D003496 ORTHO05D003909 6.2e-107 392.9 845 40.1
arahy.Tifrunner.gnm1.ann1.ZN2UT8 Arachis hypogaea HOM05D003496 ORTHO05D003909 1.2e-105 388.7 850 37.9
AT1G22260 Arabidopsis thaliana HOM05D003496 ORTHO05D003909 2.6e-105 387.5 850 39.4
arahy.Tifrunner.gnm1.ann1.92N1A9 Arachis hypogaea HOM05D003496 ORTHO05D003909 2.6e-105 387.5 850 37.4
Nitab4.5_0000232g0220 Nicotiana tabacum HOM05D003496 ORTHO05D003909 5.8e-105 386.3 848 36.4
A07p27660 Brassica napus HOM05D003496 ORTHO05D003909 9.9e-105 385.6 853 40.6
Sc23g0000220 Simmondsia chinensis HOM05D003496 ORTHO05D003909 2.9e-104 384.0 772 36.0
FAN13G0595 Fragaria x ananassa HOM05D003496 ORTHO05D003909 5.4e-103 379.8 869 36.4
Rhsim06G0082300 Rhododendron simsii HOM05D003496 ORTHO05D003909 9.3e-103 379.0 910 38.1
Peaxi162Scf00041g01739 Petunia axillaris HOM05D003496 ORTHO05D003909 1.2e-102 378.6 816 37.1
FAN04G0832 Fragaria x ananassa HOM05D003496 ORTHO05D003909 4.6e-102 376.7 861 35.7
AL1G35730 Arabidopsis lyrata HOM05D003496 ORTHO05D003909 1.3e-101 375.2 854 36.5
Cpa.g.sc36.129 Carica papaya HOM05D003496 ORTHO05D003909 5.1e-101 373.2 848 33.8
MELO3C003452.2 Cucumis melo HOM05D003496 ORTHO05D003909 8.7e-101 372.5 808 39.4
Carub.0001s2183 Capsella rubella HOM05D003496 ORTHO05D003909 1.5e-100 371.7 851 38.4
ECA233G4469 Erigeron canadensis HOM05D003496 ORTHO05D003909 5.6e-100 369.8 853 37.3
AUR62038519 Chenopodium quinoa HOM05D003496 ORTHO05D003909 7.3e-100 369.4 834 38.1
PSO761G0292 Papaver somniferum HOM05D003496 ORTHO05D003909 8.1e-99 365.9 565 40.7
A07p43490 Brassica napus HOM05D003496 ORTHO05D003909 2.4e-98 364.4 864 39.4
HanXRQChr13g0402531 Helianthus annuus HOM05D003496 ORTHO05D003909 4.0e-98 363.6 887 34.4
Sp5g33310 Schrenkiella parvula HOM05D003496 ORTHO05D003909 9.0e-98 362.5 848 39.0
BcaB03g15988 Brassica carinata HOM05D003496 ORTHO05D003909 1.5e-97 361.7 893 38.4
BolC6t40236H Brassica oleracea HOM05D003496 ORTHO05D003909 1.5e-97 361.7 864 39.4
C06p52130 Brassica napus HOM05D003496 ORTHO05D003909 2.9e-96 357.5 865 39.1
BolC6t38227H Brassica oleracea HOM05D003496 ORTHO05D003909 3.8e-96 357.1 857 39.1
BcaC08g45430 Brassica carinata HOM05D003496 ORTHO05D003909 1.1e-95 355.5 857 39.0
C06p30630 Brassica napus HOM05D003496 ORTHO05D003909 1.1e-95 355.5 857 39.0
FvH4_5g32780 Fragaria vesca HOM05D003496 ORTHO05D003909 7.9e-94 349.4 559 40.3
BraA07t30407Z Brassica rapa HOM05D003496 ORTHO05D003909 1.3e-93 348.6 909 37.5
BraA07t31861Z Brassica rapa HOM05D003496 ORTHO05D003909 2.3e-93 347.8 853 38.8
Glyma.14G173000 Glycine max HOM05D003496 ORTHO05D003909 2.3e-93 347.8 763 38.0
vmacro21271 Vaccinium macrocarpon HOM05D003496 ORTHO05D003909 3.0e-93 347.4 791 35.8
FAN18G0240 Fragaria x ananassa HOM05D003496 ORTHO05D003909 8.7e-93 345.9 710 36.6
FvH4_5g37876 Fragaria vesca HOM05D003496 ORTHO05D003909 1.6e-91 341.7 710 38.7
Ca_05276_v3 Cicer arietinum L. HOM05D003496 ORTHO05D003909 3.6e-91 340.5 845 37.0
Ca_05283_v3 Cicer arietinum L. HOM05D003496 ORTHO05D003909 3.6e-91 340.5 845 37.0
AUR62027754 Chenopodium quinoa HOM05D003496 ORTHO05D003909 8.1e-91 339.3 761 35.1
RcHm_v2.0_Chr0c28g0501001 Rosa chinensis HOM05D003496 ORTHO05D003909 1.8e-90 338.2 668 40.3
Carub.0001s2181 Capsella rubella HOM05D003496 ORTHO05D003909 4.0e-90 337.0 791 37.8
Aa31LG7G6200 Aethionema arabicum HOM05D003496 ORTHO05D003909 9.0e-90 335.9 852 34.9
BcaB02g07153 Brassica carinata HOM05D003496 ORTHO05D003909 2.0e-89 334.7 845 32.8
Thhalv10018107m.g Eutrema salsugineum HOM05D003496 ORTHO05D003909 2.2e-88 331.3 849 38.0
BcaC08g47393 Brassica carinata HOM05D003496 ORTHO05D003909 4.9e-88 330.1 915 36.8
BcaB03g15989 Brassica carinata HOM05D003496 ORTHO05D003909 1.6e-86 325.1 853 38.0
FAN08G2337 Fragaria x ananassa HOM05D003496 ORTHO05D003909 2.7e-86 324.3 575 38.4
Aqoxy4G03086 Aquilegia oxysepala HOM05D003496 ORTHO05D003909 1.3e-85 322.0 550 38.9
FAN18G2959 Fragaria x ananassa HOM05D003496 ORTHO05D003909 3.7e-83 313.9 573 37.5
Lj5C269T10 Lonicera japonica HOM05D003496 ORTHO05D003909 1.3e-80 305.4 829 32.4
CDE10G0763 Ceratophyllum demersum HOM05D003496 ORTHO05D003909 4.8e-75 287.0 492 38.4
Nitab4.5_0005777g0080 Nicotiana tabacum HOM05D003496 ORTHO05D003909 6.3e-75 286.6 818 35.2
COL.COLO4_16402 Corchorus olitorius HOM05D003496 ORTHO05D003909 1.8e-74 285.0 739 31.8
TPR.G16752 Trifolium pratense HOM05D003496 ORTHO05D003909 1.2e-73 282.3 800 34.1
Lalb_Chr10g0102381 Lupinus albus HOM05D003496 ORTHO05D003909 1.3e-72 278.9 661 36.9
VMungo0647G0446 Vigna mungo HOM05D003496 ORTHO05D003909 2.9e-72 277.7 562 35.1
Lsat_1_v5_gn_1_3120 Lactuca sativa HOM05D003496 ORTHO05D003909 5.5e-71 273.5 844 33.2
TPR.G7886 Trifolium pratense HOM05D003496 ORTHO05D003909 7.4e-68 263.1 448 36.2
unitig_899.g14555 Utricularia gibba HOM05D003496 ORTHO05D003909 8.2e-67 259.6 825 29.9
Lj5A269G20 Lonicera japonica HOM05D003496 ORTHO05D003909 2.2e-64 251.5 546 33.9
FvH4_5g39260 Fragaria vesca HOM05D003496 ORTHO05D003909 1.9e-63 248.4 428 37.1
SHI03709 Sapria himalayana HOM05D003496 ORTHO05D000023 4.2e-63 247.3 519 33.5
Solyc04g074120.4 Solanum lycopersicum HOM05D003496 ORTHO05D003909 4.6e-62 243.8 496 42.3
RcHm_v2.0_Chr0c28g0501041 Rosa chinensis HOM05D003496 ORTHO05D003909 1.1e-58 232.6 352 38.9
RcHm_v2.0_Chr7g0243601 Rosa chinensis HOM05D003496 ORTHO05D003909 1.1e-58 232.6 352 38.9
RcHm_v2.0_Chr7g0243551 Rosa chinensis HOM05D003496 ORTHO05D003909 2.6e-57 228.0 663 29.1
Actinidia30770 Actinidia chinensis HOM05D003496 ORTHO05D003909 7.4e-52 209.9 365 49.3
Actinidia10321 Actinidia chinensis HOM05D003496 ORTHO05D003909 3.8e-48 197.6 248 50.8
TPR.G7904 Trifolium pratense HOM05D003496 ORTHO05D003909 9.7e-44 183.0 212 51.9
CDE10G0427 Ceratophyllum demersum HOM05D003496 ORTHO05D003909 9.4e-39 166.4 330 34.8
Actinidia10322 Actinidia chinensis HOM05D003496 ORTHO05D003909 2.7e-38 164.9 234 44.0
CARHR022600 Cardamine hirsuta HOM05D003496 ORTHO05D003909 1.7e-35 155.6 234 42.7
Duzib093G1287 Durio zibethinus HOM05D003496 ORTHO05D003909 1.1e-34 152.9 666 26.3
RcHm_v2.0_Chr0c28g0500941 Rosa chinensis HOM05D003496 ORTHO05D003909 1.1e-34 152.9 218 44.0
CARHR022630 Cardamine hirsuta HOM05D003496 ORTHO05D003909 7.0e-34 150.2 257 38.9
RcHm_v2.0_Chr0c28g0501031 Rosa chinensis HOM05D003496 ORTHO05D003909 7.7e-33 146.7 195 50.8
RcHm_v2.0_Chr7g0243591 Rosa chinensis HOM05D003496 ORTHO05D003909 7.7e-33 146.7 195 50.8
Actinidia30771 Actinidia chinensis HOM05D003496 ORTHO05D003909 1.1e-31 142.9 245 38.8
SEGI_13289 Sequoiadendron giganteum HOM05D003496 ORTHO05D003909 3.0e-29 134.8 611 24.2
CARHR022660 Cardamine hirsuta HOM05D003496 ORTHO05D003909 1.8e-26 125.6 587 31.0
VMungo0647G2412 Vigna mungo HOM05D003496 ORTHO05D003909 1.3e-24 119.4 121 56.2
C05p24820 Brassica napus HOM05D000415 ORTHO05D003909 1.1e-23 116.3 266 34.6
BolC5t31211H Brassica oleracea HOM05D003496 ORTHO05D003909 1.1e-23 116.3 266 34.6
Duzib093G0574 Durio zibethinus HOM05D003496 ORTHO05D003909 1.9e-23 115.5 459 29.6
Glyma.14G121700 Glycine max HOM05D003496 ORTHO05D003909 1.2e-22 112.8 184 41.3
FvH4_5g39261 Fragaria vesca HOM05D003496 ORTHO05D003909 2.9e-19 101.7 96 59.4
Lalb_Chr10g0102391 Lupinus albus HOM05D003496 ORTHO05D003909 4.9e-19 100.9 125 48.8
MBI19_g10187_MAGBIO Magnolia biondii HOM05D020163 ORTHO05D003909 1.8e-18 99.0 104 54.8
FAN08G0731 Fragaria x ananassa HOM05D003496 ORTHO05D003909 2.4e-18 98.6 160 42.5
FvH4_5g32650 Fragaria vesca HOM05D003496 ORTHO05D003909 1.6e-17 95.9 131 41.2
MBI16_g15384_MAGBIO Magnolia biondii HOM05D000112 ORTHO05D003909 1.6e-17 95.9 80 67.5
RcHm_v2.0_Chr0c28g0500891 Rosa chinensis HOM05D003496 ORTHO05D003909 3.5e-17 94.7 96 57.3
Cc02_g10170 Coffea canephora HOM05D003496 ORTHO05D003909 1.0e-16 93.2 112 50.9
BcaB03g15987 Brassica carinata HOM05D003496 ORTHO05D003909 3.0e-16 91.7 158 44.3
AL1G36770 Arabidopsis lyrata HOM05D003496 ORTHO05D023659 5.0e-16 90.9 205 48.8
VMungo0647G2290 Vigna mungo HOM05D003496 ORTHO05D003909 6.6e-16 90.5 96 50.0
TPR.G7899 Trifolium pratense HOM05D003496 ORTHO05D003909 1.1e-15 89.7 101 49.5
CAN.G1227.18 Capsicum annuum HOM05D003496 ORTHO05D003909 1.9e-15 89.0 144 41.0
FAN18G0092 Fragaria x ananassa HOM05D003496 ORTHO05D003909 1.6e-14 85.9 193 31.1
SMO230G0003 Selaginella moellendorffii HOM05D003496 ORTHO05D003909 1.2e-12 79.7 379 25.1
MBI08_g24353_MAGBIO Magnolia biondii HOM05D003496 ORTHO05D030050 2.0e-12 79.0 84 54.8
MBI02_g14193_MAGBIO Magnolia biondii HOM05D003496 ORTHO05D003909 2.6e-12 78.6 81 58.0
SEGI_27299 Sequoiadendron giganteum HOM05D003496 ORTHO05D003909 4.4e-12 77.8 470 24.3
FAN08G1794 Fragaria x ananassa HOM05D003496 ORTHO05D003909 2.9e-11 75.1 208 27.4
BcaC08g44544 Brassica carinata HOM05D003496 ORTHO05D003909 5.4e-10 70.9 82 52.4
RcHm_v2.0_Chr0c28g0500951 Rosa chinensis HOM05D003496 ORTHO05D003909 1.2e-09 69.7 152 30.3
SHI03714 Sapria himalayana HOM05D003496 ORTHO05D003909 4.6e-09 67.8 111 40.5
MBI05_g41336_MAGBIO Magnolia biondii HOM05D003496 ORTHO05D030050 6.0e-09 67.4 66 59.1
BcaC05g26434 Brassica carinata HOM05D000415 ORTHO05D003909 1.7e-08 65.9 285 27.7
SHI03711 Sapria himalayana HOM05D003496 ORTHO05D003909 3.0e-08 65.1 96 44.8
MBI19_g28358_MAGBIO Magnolia biondii HOM05D020163 ORTHO05D003909 5.0e-08 64.3 114 40.4
MBI19_g06978_MAGBIO Magnolia biondii HOM05D020163 ORTHO05D003909 6.6e-08 63.9 114 40.4
MBI05_g14901_MAGBIO Magnolia biondii HOM05D003496 ORTHO05D030050 1.5e-07 62.8 78 52.6
Cc02_g31800 Coffea canephora HOM05D003496 ORTHO05D003909 7.3e-07 60.5 112 40.2
Haze_22265 Corylus avellana HOM05D003496 ORTHO05D003909 7.3e-07 60.5 38 78.9
Mapoly0040s0123 Marchantia polymorpha HOM05D003496 ORTHO05D003909 9.5e-07 60.1 547 21.4
Glyma.02G069400 Glycine max HOM05D000487 ORTHO05D000405 2.1e-06 58.9 72 43.1
Glyma.13G224300 Glycine max HOM05D000487 ORTHO05D000405 2.1e-06 58.9 72 43.1
FvH4_5g37879 Fragaria vesca HOM05D003496 ORTHO05D003909 3.6e-06 58.2 84 39.3
RcHm_v2.0_Chr7g0227211 Rosa chinensis HOM05D003496 ORTHO05D003909 4.7e-06 57.8 72 48.6


User provided reference genes

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