Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_004230 Vanilla planifolia HOM05D000955 ORTHO05D003340 1.7e-40 169.1 100 100.0
Os09g0458900 Oryza sativa ssp. japonica HOM05D000955 ORTHO05D003340 6.9e-21 104.0 100 53.0
Zm00001eb100840 Zea mays HOM05D000955 ORTHO05D003340 2.2e-19 99.0 100 51.0
HPP92_004112 Vanilla planifolia HOM05D000955 ORTHO05D003340 3.2e-18 95.1 84 53.6
Aqoxy6G01348 Aquilegia oxysepala HOM05D000955 ORTHO05D003340 1.9e-15 85.9 79 51.9
MBI06_g36647_MAGBIO Magnolia biondii HOM05D000955 ORTHO05D003340 5.6e-15 84.3 83 48.2
MBI02_g02963_MAGBIO Magnolia biondii HOM05D000955 ORTHO05D003340 1.3e-14 83.2 84 50.0
Migut.H00440 Erythranthe guttata HOM05D000955 ORTHO05D003340 1.6e-14 82.8 96 44.8
Aqoxy5G01248 Aquilegia oxysepala HOM05D000955 ORTHO05D003340 4.8e-14 81.3 79 48.1
Os07g0619200 Oryza sativa ssp. japonica HOM05D000955 ORTHO05D003340 1.4e-13 79.7 83 45.8
CDE06G0816 Ceratophyllum demersum HOM05D000955 ORTHO05D003340 2.4e-13 79.0 79 54.4
Nn1g04889 Nelumbo nucifera HOM05D000955 ORTHO05D003340 2.4e-13 79.0 94 42.6
Zm00001eb109460 Zea mays HOM05D000955 ORTHO05D003340 5.3e-13 77.8 86 46.5
ECA232G3034 Erigeron canadensis HOM05D000955 ORTHO05D003340 9.0e-13 77.0 83 42.2
Nn5g30250 Nelumbo nucifera HOM05D000955 ORTHO05D003340 2.0e-12 75.9 80 46.2
Prupe.1G437300 Prunus persica HOM05D000955 ORTHO05D003340 2.0e-12 75.9 94 42.6
HanXRQChr09g0267871 Helianthus annuus HOM05D000955 ORTHO05D003340 2.6e-12 75.5 83 43.4
DCAR_008792 Daucus carota HOM05D000955 ORTHO05D003340 3.4e-12 75.1 81 45.7
DCAR_008793 Daucus carota HOM05D000955 ORTHO05D003340 4.5e-12 74.7 81 43.2
vmacro21529 Vaccinium macrocarpon HOM05D000955 ORTHO05D003340 4.5e-12 74.7 97 40.2
RcHm_v2.0_Chr5g0048521 Rosa chinensis HOM05D000955 ORTHO05D003340 7.6e-12 73.9 94 41.5
CSS0029458 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D003340 1.0e-11 73.6 99 41.4
Os09g0458800 Oryza sativa ssp. japonica HOM05D000955 ORTHO05D003340 1.3e-11 73.2 79 50.6
Aqoxy5G01246 Aquilegia oxysepala HOM05D000955 ORTHO05D003340 1.7e-11 72.8 80 43.8
Oeu004829.1 Olea europaea HOM05D000955 ORTHO05D003340 2.9e-11 72.0 90 43.3
CDE08G0020 Ceratophyllum demersum HOM05D000955 ORTHO05D003340 3.8e-11 71.6 74 45.9
Actinidia16499 Actinidia chinensis HOM05D000955 ORTHO05D003340 4.9e-11 71.2 78 44.9
FAN20G1846 Fragaria x ananassa HOM05D000955 ORTHO05D003340 6.5e-11 70.9 94 46.8
COL.COLO4_26487 Corchorus olitorius HOM05D000955 ORTHO05D003340 8.4e-11 70.5 79 44.3
RcHm_v2.0_Chr6g0307621 Rosa chinensis HOM05D000955 ORTHO05D003340 8.4e-11 70.5 94 45.7
RcHm_v2.0_Chr6g0307791 Rosa chinensis HOM05D000955 ORTHO05D003340 8.4e-11 70.5 94 45.7
CAN.G1422.10 Capsicum annuum HOM05D000955 ORTHO05D003340 1.1e-10 70.1 88 42.0
FAN15G0770 Fragaria x ananassa HOM05D000955 ORTHO05D003340 1.1e-10 70.1 94 52.1
Manes.12G102501 Manihot esculenta HOM05D000955 ORTHO05D003340 1.1e-10 70.1 79 44.3
Aqoxy5G01245 Aquilegia oxysepala HOM05D000955 ORTHO05D003340 1.4e-10 69.7 80 45.0
FvH4_2g34550 Fragaria vesca HOM05D000955 ORTHO05D003340 1.4e-10 69.7 94 51.1
Gohir.A06G017800 Gossypium hirsutum HOM05D000955 ORTHO05D003340 1.4e-10 69.7 79 40.5
Nitab4.5_0007986g0020 Nicotiana tabacum HOM05D000955 ORTHO05D003340 1.4e-10 69.7 83 41.0
Zm00001eb279150 Zea mays HOM05D000955 ORTHO05D003340 1.4e-10 69.7 81 43.2
Aqoxy5G01247 Aquilegia oxysepala HOM05D000955 ORTHO05D003340 1.9e-10 69.3 78 41.0
Manes.13G127500 Manihot esculenta HOM05D000955 ORTHO05D003340 2.5e-10 68.9 79 41.8
Cc10_g04230 Coffea canephora HOM05D000955 ORTHO05D003340 3.2e-10 68.6 79 43.0
DCAR_010900 Daucus carota HOM05D000955 ORTHO05D003340 3.2e-10 68.6 79 43.0
Dinv39322 Davidia involucrata HOM05D000955 ORTHO05D003340 3.2e-10 68.6 98 49.0
Dinv39861 Davidia involucrata HOM05D000955 ORTHO05D003340 3.2e-10 68.6 79 43.0
Migut.K00765 Erythranthe guttata HOM05D000955 ORTHO05D003340 3.2e-10 68.6 95 41.1
Lj4C144G12 Lonicera japonica HOM05D002458 ORTHO05D002603 3.2e-10 68.6 79 43.0
Nitab4.5_0000686g0110 Nicotiana tabacum HOM05D000955 ORTHO05D003340 3.2e-10 68.6 94 40.4
Peaxi162Scf00064g00025 Petunia axillaris HOM05D000955 ORTHO05D003340 3.2e-10 68.6 81 40.7
Potri.014G030900 Populus trichocarpa HOM05D000955 ORTHO05D003340 4.2e-10 68.2 82 43.9
CAN.G1518.2 Capsicum annuum HOM05D000955 ORTHO05D003340 5.5e-10 67.8 83 41.0
Lj4C54T13 Lonicera japonica HOM05D000955 ORTHO05D003340 5.5e-10 67.8 102 39.2
Prupe.7G134600 Prunus persica HOM05D000955 ORTHO05D003340 7.1e-10 67.4 80 41.2
HPP92_004078 Vanilla planifolia HOM05D000955 ORTHO05D003340 7.1e-10 67.4 57 54.4
Migut.C00586 Erythranthe guttata HOM05D000955 ORTHO05D003340 9.3e-10 67.0 80 43.8
Nn5g30251 Nelumbo nucifera HOM05D000955 ORTHO05D003340 9.3e-10 67.0 79 41.8
Cpa.g.sc55.161 Carica papaya HOM05D000955 ORTHO05D003340 1.2e-09 66.6 79 41.8
FAN27G2801 Fragaria x ananassa HOM05D000955 ORTHO05D003340 1.2e-09 66.6 94 48.9
Manes.18G035900 Manihot esculenta HOM05D000955 ORTHO05D003340 1.2e-09 66.6 79 44.3
Gohir.A12G070700 Gossypium hirsutum HOM05D000955 ORTHO05D003340 1.6e-09 66.2 81 39.5
Gohir.D12G068600 Gossypium hirsutum HOM05D000955 ORTHO05D003340 1.6e-09 66.2 81 39.5
Gorai.008G075000 Gossypium raimondii HOM05D000955 ORTHO05D003340 1.6e-09 66.2 81 39.5
Rhsim07G0229500 Rhododendron simsii HOM05D000955 ORTHO05D003340 1.6e-09 66.2 78 39.7
DCAR_008791 Daucus carota HOM05D000955 ORTHO05D003340 2.1e-09 65.9 81 38.3
Hma1.2p1_0718F.1_g208350 Hydrangea macrophylla HOM05D000955 ORTHO05D003340 2.1e-09 65.9 102 37.3
Rhsim07G0228900 Rhododendron simsii HOM05D000955 ORTHO05D003340 2.7e-09 65.5 78 42.3
COL.COLO4_26485 Corchorus olitorius HOM05D000955 ORTHO05D003340 3.5e-09 65.1 83 39.8
FAN28G2528 Fragaria x ananassa HOM05D000955 ORTHO05D003340 3.5e-09 65.1 79 41.8
Nitab4.5_0006312g0020 Nicotiana tabacum HOM05D000955 ORTHO05D003340 3.5e-09 65.1 80 40.0
Potri.002G127000 Populus trichocarpa HOM05D000955 ORTHO05D003340 3.5e-09 65.1 80 41.2
FvH4_1g15920 Fragaria vesca HOM05D000955 ORTHO05D003340 4.6e-09 64.7 79 41.8
Glyma.06G039400 Glycine max HOM05D000955 ORTHO05D003340 4.6e-09 64.7 79 43.0
RcHm_v2.0_Chr5g0048531 Rosa chinensis HOM05D000955 ORTHO05D003340 4.6e-09 64.7 94 42.6
Cfa004009 Carpinus fangiana HOM05D000955 ORTHO05D003340 6.0e-09 64.3 78 42.3
FAN19G2583 Fragaria x ananassa HOM05D000955 ORTHO05D003340 6.0e-09 64.3 79 41.8
Nitab4.5_0002263g0020 Nicotiana tabacum HOM05D000955 ORTHO05D003340 6.0e-09 64.3 79 40.5
SalBow7G0951 Salvia bowleyana HOM05D000955 ORTHO05D003340 6.0e-09 64.3 92 41.3
MSTRG.3423 Avicennia marina HOM05D000955 ORTHO05D003340 7.9e-09 63.9 87 41.4
COL.COLO4_26486 Corchorus olitorius HOM05D000955 ORTHO05D003340 7.9e-09 63.9 92 40.2
Lsat_1_v5_gn_4_125520 Lactuca sativa HOM05D000955 ORTHO05D003340 7.9e-09 63.9 92 34.8
MBI02_g02964_MAGBIO Magnolia biondii HOM05D000955 ORTHO05D003340 7.9e-09 63.9 79 41.8
Potri.014G030500 Populus trichocarpa HOM05D000955 ORTHO05D003340 7.9e-09 63.9 79 39.2
RcHm_v2.0_Chr2g0105311 Rosa chinensis HOM05D000955 ORTHO05D003340 7.9e-09 63.9 79 41.8
arahy.Tifrunner.gnm1.ann1.LA24B5 Arachis hypogaea HOM05D000955 ORTHO05D003340 1.0e-08 63.5 80 41.2
FAN26G2503 Fragaria x ananassa HOM05D000955 ORTHO05D003340 1.0e-08 63.5 79 41.8
Peaxi162Scf00917g00031 Petunia axillaris HOM05D000955 ORTHO05D003340 1.0e-08 63.5 79 39.2
Peaxi162Scf00917g00047 Petunia axillaris HOM05D000955 ORTHO05D003340 1.0e-08 63.5 79 39.2
Potri.007G042700 Populus trichocarpa HOM05D000955 ORTHO05D003340 1.0e-08 63.5 79 38.0
Sopen04g032690 Solanum pennellii HOM05D000955 ORTHO05D003340 1.0e-08 63.5 83 42.2
unitig_32.g10766 Utricularia gibba HOM05D000939 ORTHO05D000745 1.0e-08 63.5 94 39.4
vmacro04455 Vaccinium macrocarpon HOM05D000955 ORTHO05D003340 1.0e-08 63.5 81 42.0
CDE10G0229 Ceratophyllum demersum HOM05D000955 ORTHO05D003340 1.3e-08 63.2 78 42.3
ECA246G3551 Erigeron canadensis HOM05D000955 ORTHO05D003340 1.3e-08 63.2 81 38.3
Migut.H00439 Erythranthe guttata HOM05D000955 ORTHO05D003340 1.3e-08 63.2 82 41.5
Nitab4.5_0000728g0030 Nicotiana tabacum HOM05D000955 ORTHO05D003340 1.3e-08 63.2 79 39.2
Manes.18G035800 Manihot esculenta HOM05D000955 ORTHO05D003340 1.8e-08 62.8 98 40.8
Solyc02g065010.1 Solanum lycopersicum HOM05D000955 ORTHO05D003340 1.8e-08 62.8 79 39.2
Sopen02g015140 Solanum pennellii HOM05D000955 ORTHO05D003340 1.8e-08 62.8 79 39.2
CAN.G165.19 Capsicum annuum HOM05D000955 ORTHO05D003340 2.3e-08 62.4 79 39.2
Gorai.010G018800 Gossypium raimondii HOM05D000955 ORTHO05D003340 2.3e-08 62.4 80 43.8
Solyc04g079080.2 Solanum lycopersicum HOM05D000955 ORTHO05D003340 2.3e-08 62.4 83 41.0
Thecc.08G010100 Theobroma cacao HOM05D000955 ORTHO05D003340 2.3e-08 62.4 92 39.1
Gohir.A06G018100 Gossypium hirsutum HOM05D000955 ORTHO05D003340 3.0e-08 62.0 81 43.2
Os03g0395200 Oryza sativa ssp. japonica HOM05D000955 ORTHO05D003340 3.0e-08 62.0 94 41.5
CAN.G371.28 Capsicum annuum HOM05D000955 ORTHO05D003340 3.9e-08 61.6 83 43.4
CDE10G0233 Ceratophyllum demersum HOM05D000955 ORTHO05D003340 3.9e-08 61.6 78 38.5
Migut.C00587 Erythranthe guttata HOM05D000955 ORTHO05D003340 3.9e-08 61.6 80 36.2
Gohir.D06G016000 Gossypium hirsutum HOM05D000955 ORTHO05D003340 3.9e-08 61.6 80 43.8
Rhsim07G0229100 Rhododendron simsii HOM05D000955 ORTHO05D003340 3.9e-08 61.6 78 38.5
SalBow5G1664 Salvia bowleyana HOM05D000955 ORTHO05D003340 3.9e-08 61.6 94 41.5
SalBow5G5547 Salvia bowleyana HOM05D000955 ORTHO05D003340 3.9e-08 61.6 94 41.5
Zm00001eb373190 Zea mays HOM05D000955 ORTHO05D003340 3.9e-08 61.6 82 39.0
Eucgr.F00234 Eucalyptus grandis HOM05D000955 ORTHO05D003340 5.1e-08 61.2 80 41.2
Phvul.009G064500 Phaseolus vulgaris HOM05D000955 ORTHO05D003340 5.1e-08 61.2 79 40.5
Psat6g013520 Pisum sativum HOM05D000955 ORTHO05D003340 5.1e-08 61.2 79 39.2
Sopen12g030750 Solanum pennellii HOM05D000955 ORTHO05D003340 5.1e-08 61.2 83 36.1
TPR.G28116 Trifolium pratense HOM05D000955 ORTHO05D003340 5.1e-08 61.2 79 39.2
Atru.chr3.343 Acer truncatum HOM05D000955 ORTHO05D003340 6.7e-08 60.8 79 36.7
Glyma.04G038300 Glycine max HOM05D000955 ORTHO05D003340 6.7e-08 60.8 79 40.5
Gohir.D06G016100 Gossypium hirsutum HOM05D000955 ORTHO05D003340 6.7e-08 60.8 81 43.2
Gorai.005G102900 Gossypium raimondii HOM05D000955 ORTHO05D003340 6.7e-08 60.8 89 39.3
Medtr1g019720 Medicago truncatula HOM05D000955 ORTHO05D003340 6.7e-08 60.8 79 38.0
Nitab4.5_0001580g0040 Nicotiana tabacum HOM05D000955 ORTHO05D003340 6.7e-08 60.8 78 41.0
Peaxi162Scf00064g00006 Petunia axillaris HOM05D000955 ORTHO05D003340 6.7e-08 60.8 80 40.0
Psat6g013560 Pisum sativum HOM05D000955 ORTHO05D003340 6.7e-08 60.8 79 38.0
Psat6g013720 Pisum sativum HOM05D000955 ORTHO05D003340 6.7e-08 60.8 80 35.0
Sabra02G0099500 Salix brachista HOM05D000955 ORTHO05D003340 6.7e-08 60.8 74 43.2
Thecc.01G054500 Theobroma cacao HOM05D000955 ORTHO05D003340 6.7e-08 60.8 79 36.7
Zm00001eb193710 Zea mays HOM05D000955 ORTHO05D003340 6.7e-08 60.8 72 44.4
CAN.G1518.1 Capsicum annuum HOM05D000955 ORTHO05D003340 8.7e-08 60.5 80 36.2
Gohir.D06G015700 Gossypium hirsutum HOM05D000955 ORTHO05D003340 8.7e-08 60.5 93 40.9
Sabra14G0021800 Salix brachista HOM05D000955 ORTHO05D003340 8.7e-08 60.5 91 39.6
Solyc12g088850.1 Solanum lycopersicum HOM05D000955 ORTHO05D003340 8.7e-08 60.5 84 36.9
Sopen12g030740 Solanum pennellii HOM05D000955 ORTHO05D003340 8.7e-08 60.5 84 36.9
PGSC0003DMG400025477 Solanum tuberosum HOM05D000955 ORTHO05D003340 8.7e-08 60.5 79 38.0
Gohir.D06G015900 Gossypium hirsutum HOM05D000955 ORTHO05D003340 1.1e-07 60.1 84 40.5
Gorai.010G018500 Gossypium raimondii HOM05D000955 ORTHO05D003340 1.1e-07 60.1 84 40.5
PGSC0003DMG400007985 Solanum tuberosum HOM05D000955 ORTHO05D003340 1.1e-07 60.1 82 40.2
COL.COLO4_11400 Corchorus olitorius HOM05D000955 ORTHO05D003340 1.5e-07 59.7 78 37.2
Psat5g043640 Pisum sativum HOM05D000955 ORTHO05D003340 1.5e-07 59.7 83 38.6
Solyc12g088860.2 Solanum lycopersicum HOM05D000955 ORTHO05D003340 1.5e-07 59.7 81 35.8
CiPaw.01G019000 Carya illinoinensis HOM05D000955 ORTHO05D003340 1.9e-07 59.3 81 39.5
Ca_13297_v3 Cicer arietinum L. HOM05D000955 ORTHO05D003340 1.9e-07 59.3 79 38.0
Gohir.A06G017700 Gossypium hirsutum HOM05D000955 ORTHO05D003340 1.9e-07 59.3 81 42.0
ECA246G2186 Erigeron canadensis HOM05D000955 ORTHO05D003340 2.5e-07 58.9 78 35.9
Eucgr.F00233 Eucalyptus grandis HOM05D000955 ORTHO05D003340 3.3e-07 58.5 98 36.7
Gorai.010G018600 Gossypium raimondii HOM05D000955 ORTHO05D003340 3.3e-07 58.5 80 42.5
Peaxi162Scf00064g00002 Petunia axillaris HOM05D000955 ORTHO05D003340 3.3e-07 58.5 97 35.1
Potri.014G030800 Populus trichocarpa HOM05D000955 ORTHO05D003340 3.3e-07 58.5 79 39.2
HanXRQChr12g0378991 Helianthus annuus HOM05D000955 ORTHO05D003340 4.3e-07 58.2 78 34.6
Medtr1g019715 Medicago truncatula HOM05D000955 ORTHO05D003340 4.3e-07 58.2 79 36.7
Psat6g013600 Pisum sativum HOM05D000955 ORTHO05D003340 4.3e-07 58.2 79 35.4
Psat6g013640 Pisum sativum HOM05D000955 ORTHO05D003340 4.3e-07 58.2 79 36.7
Sabra14G0021600 Salix brachista HOM05D000955 ORTHO05D003340 4.3e-07 58.2 79 39.2
Sabra14G0021900 Salix brachista HOM05D000955 ORTHO05D003340 4.3e-07 58.2 79 39.2
TAR628G1637 Trochodendron aralioides HOM05D000955 ORTHO05D003340 4.3e-07 58.2 38 60.5
Gohir.D06G015800 Gossypium hirsutum HOM05D000955 ORTHO05D003340 5.7e-07 57.8 80 41.2
Nitab4.5_0000453g0120 Nicotiana tabacum HOM05D000955 ORTHO05D003340 5.7e-07 57.8 79 40.5
TPR.G10919 Trifolium pratense HOM05D000955 ORTHO05D003340 5.7e-07 57.8 79 35.4
unitig_748.g8402 Utricularia gibba HOM05D000955 ORTHO05D003340 7.4e-07 57.4 86 39.5
Lsat_1_v5_gn_3_90980 Lactuca sativa HOM05D000955 ORTHO05D003340 9.6e-07 57.0 78 32.1
TPR.G17546 Trifolium pratense HOM05D000955 ORTHO05D003340 9.6e-07 57.0 79 35.4
Gorai.010G018700 Gossypium raimondii HOM05D000955 ORTHO05D003340 1.3e-06 56.6 84 39.3
HanXRQChr02g0039431 Helianthus annuus HOM05D000955 ORTHO05D003340 1.3e-06 56.6 80 37.5
Medtr3g101610 Medicago truncatula HOM05D000955 ORTHO05D003340 1.3e-06 56.6 79 36.7
Potri.014G030700 Populus trichocarpa HOM05D000955 ORTHO05D003340 1.3e-06 56.6 80 37.5
Lsat_1_v5_gn_3_90960 Lactuca sativa HOM05D000955 ORTHO05D003340 1.6e-06 56.2 78 33.3
TPR.G17533 Trifolium pratense HOM05D000955 ORTHO05D003340 1.6e-06 56.2 79 36.7
Gohir.A06G017600 Gossypium hirsutum HOM05D000955 ORTHO05D003340 2.1e-06 55.8 81 39.5
HanXRQChr15g0473701 Helianthus annuus HOM05D000955 ORTHO05D003340 2.1e-06 55.8 78 34.6
Rhsim07G0229300 Rhododendron simsii HOM05D000955 ORTHO05D003340 2.1e-06 55.8 43 48.8
ECA246G1907 Erigeron canadensis HOM05D000955 ORTHO05D003340 2.8e-06 55.5 78 34.6
Rhsim07G0229000 Rhododendron simsii HOM05D000955 ORTHO05D003340 2.8e-06 55.5 43 51.2
Rhsim07G0229400 Rhododendron simsii HOM05D000955 ORTHO05D003340 2.8e-06 55.5 43 51.2
TAR381G1582 Trochodendron aralioides HOM05D000955 ORTHO05D003340 3.7e-06 55.1 81 35.8
Glyma.06G039300 Glycine max HOM05D000955 ORTHO05D003340 4.8e-06 54.7 79 39.2
HPP92_016724 Vanilla planifolia HOM05D000955 ORTHO05D003340 4.8e-06 54.7 70 35.7
SalBow7G3079 Salvia bowleyana HOM05D000955 ORTHO05D003340 6.2e-06 54.3 67 43.3


User provided reference genes

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