Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_004206 Vanilla planifolia HOM05D005139 ORTHO05D006125 1.3e-82 309.7 153 100.0
CSS0042561 Camellia sinensis var. sinensis HOM05D005139 ORTHO05D006125 7.9e-69 263.8 152 82.9
Nitab4.5_0007851g0020 Nicotiana tabacum HOM05D005139 ORTHO05D006125 3.9e-68 261.5 152 80.9
Peaxi162Scf00000g06812 Petunia axillaris HOM05D005139 ORTHO05D006125 3.9e-68 261.5 152 80.9
Dinv18369 Davidia involucrata HOM05D005139 ORTHO05D006125 8.8e-68 260.4 152 81.6
Nitab4.5_0000035g0250 Nicotiana tabacum HOM05D005139 ORTHO05D006125 8.8e-68 260.4 152 80.3
Solyc12g014320.2 Solanum lycopersicum HOM05D005139 ORTHO05D006125 8.8e-68 260.4 152 80.3
Sopen12g006100 Solanum pennellii HOM05D005139 ORTHO05D006125 8.8e-68 260.4 152 80.3
Actinidia12584 Actinidia chinensis HOM05D005139 ORTHO05D006125 2.6e-67 258.8 152 82.2
Ciclev10019589m.g Citrus clementina HOM05D005139 ORTHO05D006125 2.6e-67 258.8 152 80.9
Cc05_g10990 Coffea canephora HOM05D005139 ORTHO05D006125 4.4e-67 258.1 152 79.6
CAN.G443.5 Capsicum annuum HOM05D005139 ORTHO05D006125 7.4e-67 257.3 152 78.9
SalBow7G0115 Salvia bowleyana HOM05D005139 ORTHO05D006125 7.4e-67 257.3 152 79.6
SalBow7G2844 Salvia bowleyana HOM05D005139 ORTHO05D006125 7.4e-67 257.3 152 79.6
Migut.H02003 Erythranthe guttata HOM05D005139 ORTHO05D006125 9.7e-67 256.9 152 79.6
Prupe.4G161700 Prunus persica HOM05D005139 ORTHO05D006125 9.7e-67 256.9 152 79.6
Ciclev10023690m.g Citrus clementina HOM05D005139 ORTHO05D006125 1.3e-66 256.5 152 79.6
Manes.15G095700 Manihot esculenta HOM05D005139 ORTHO05D006125 1.3e-66 256.5 152 80.3
GSVIVG01014182001 Vitis vinifera HOM05D005139 ORTHO05D006125 1.3e-66 256.5 152 80.3
Psat4g140160 Pisum sativum HOM05D005139 ORTHO05D006125 1.7e-66 256.1 152 80.3
SGA_v2.0_scaffold130G34288 Striga asiatica HOM05D005139 ORTHO05D006125 1.7e-66 256.1 152 78.9
MD11G1264600 Malus domestica HOM05D005139 ORTHO05D006125 2.2e-66 255.8 152 79.6
Atru.chr2.2128 Acer truncatum HOM05D005139 ORTHO05D006125 2.8e-66 255.4 152 79.6
Dinv15003 Davidia involucrata HOM05D005139 ORTHO05D006125 4.8e-66 254.6 152 80.3
ECA236G1068 Erigeron canadensis HOM05D005139 ORTHO05D006125 8.2e-66 253.8 152 79.6
PSO063G5899 Papaver somniferum HOM05D005139 ORTHO05D006125 8.2e-66 253.8 152 81.6
DCAR_013162 Daucus carota HOM05D005139 ORTHO05D006125 1.1e-65 253.4 152 78.9
PGR083G0616 Punica granatum HOM05D005139 ORTHO05D006125 1.1e-65 253.4 152 80.3
THA.LOC104812316 Tarenaya hassleriana HOM05D005139 ORTHO05D006125 1.1e-65 253.4 152 79.6
VMungo1127G1423 Vigna mungo HOM05D005139 ORTHO05D006125 1.1e-65 253.4 152 79.6
AUR62037557 Chenopodium quinoa HOM05D005139 ORTHO05D006125 1.8e-65 252.7 152 78.3
Duzib213G0634 Durio zibethinus HOM05D005139 ORTHO05D006125 1.8e-65 252.7 152 78.9
Lj3g0013017 Lotus japonicus HOM05D005139 ORTHO05D006125 1.8e-65 252.7 153 79.7
Oeu005379.1 Olea europaea HOM05D005139 ORTHO05D006125 2.4e-65 252.3 152 78.9
Phvul.011G165500 Phaseolus vulgaris HOM05D005139 ORTHO05D006125 2.4e-65 252.3 152 79.6
Hund10469 Selenicereus undatus HOM05D005139 ORTHO05D006125 2.4e-65 252.3 152 78.3
TAR626G0095 Trochodendron aralioides HOM05D005139 ORTHO05D006125 2.4e-65 252.3 152 80.3
Gohir.D01G042704 Gossypium hirsutum HOM05D005139 ORTHO05D006125 3.1e-65 251.9 152 78.3
Gorai.002G053800 Gossypium raimondii HOM05D005139 ORTHO05D006125 3.1e-65 251.9 152 78.3
Lsat_1_v5_gn_7_102480 Lactuca sativa HOM05D005139 ORTHO05D006125 3.1e-65 251.9 152 79.6
PSO782G2705 Papaver somniferum HOM05D005139 ORTHO05D006125 3.1e-65 251.9 152 80.9
Eucgr.F01248 Eucalyptus grandis HOM05D005139 ORTHO05D006125 4.1e-65 251.5 152 78.9
Lalb_Chr03g0031181 Lupinus albus HOM05D005139 ORTHO05D006125 4.1e-65 251.5 152 79.6
Sp5g33790 Schrenkiella parvula HOM05D005139 ORTHO05D006125 5.3e-65 251.1 152 78.9
Glyma.06G228700 Glycine max HOM05D005139 ORTHO05D006125 1.2e-64 250.0 152 78.9
Sed0024992 Sechium edule HOM05D005139 ORTHO05D006125 1.2e-64 250.0 152 78.9
Gohir.A01G053400 Gossypium hirsutum HOM05D005139 ORTHO05D006125 1.6e-64 249.6 152 77.6
TPR.G5772 Trifolium pratense HOM05D005139 ORTHO05D006125 1.6e-64 249.6 153 78.4
Glyma.12G156300 Glycine max HOM05D005139 ORTHO05D006125 2.0e-64 249.2 152 78.9
CiPaw.11G159600 Carya illinoinensis HOM05D005139 ORTHO05D006125 2.6e-64 248.8 152 77.6
Thhalv10018370m.g Eutrema salsugineum HOM05D005139 ORTHO05D006125 2.6e-64 248.8 152 77.6
BcaB03g16034 Brassica carinata HOM05D005139 ORTHO05D006125 3.5e-64 248.4 152 77.6
Potri.011G108800 Populus trichocarpa HOM05D005139 ORTHO05D006125 3.5e-64 248.4 152 78.3
Thecc.07G118200 Theobroma cacao HOM05D005139 ORTHO05D006125 3.5e-64 248.4 152 77.6
Aqoxy3G02037 Aquilegia oxysepala HOM05D005139 ORTHO05D006125 4.5e-64 248.1 152 78.3
EL10Ac4g08361 Beta vulgaris HOM05D005139 ORTHO05D006125 7.7e-64 247.3 152 76.3
Sabra11G0096100 Salix brachista HOM05D005139 ORTHO05D006125 7.7e-64 247.3 152 77.6
A07p43980 Brassica napus HOM05D005139 ORTHO05D006125 1.0e-63 246.9 152 77.0
BraA07t31905Z Brassica rapa HOM05D005139 ORTHO05D006125 1.0e-63 246.9 152 77.0
Aa31LG4G2260 Aethionema arabicum HOM05D005139 ORTHO05D006125 1.3e-63 246.5 152 77.0
Aqoxy4G00276 Aquilegia oxysepala HOM05D005139 ORTHO05D006125 1.3e-63 246.5 152 77.0
BcaC08g47457 Brassica carinata HOM05D005139 ORTHO05D006125 1.3e-63 246.5 152 77.0
C06p52650 Brassica napus HOM05D005139 ORTHO05D006125 1.3e-63 246.5 152 77.0
Cfa019555 Carpinus fangiana HOM05D005139 ORTHO05D006125 1.3e-63 246.5 152 77.0
ClCG04G002160 Citrullus lanatus HOM05D005139 ORTHO05D006125 1.3e-63 246.5 152 77.6
MELO3C008916.2 Cucumis melo HOM05D005139 ORTHO05D006125 1.3e-63 246.5 152 77.6
CsaV3_4G030530 Cucumis sativus L. HOM05D005139 ORTHO05D006125 1.3e-63 246.5 152 77.6
CANSAT35G0508 Cannabis sativa HOM05D005139 ORTHO05D006125 2.2e-63 245.7 152 76.3
HanXRQChr15g0495211 Helianthus annuus HOM05D005139 ORTHO05D006125 2.2e-63 245.7 152 77.6
TWI38G1771 Tripterygium wilfordii HOM05D005139 ORTHO05D006125 2.2e-63 245.7 152 77.0
Potri.001G389300 Populus trichocarpa HOM05D005139 ORTHO05D006125 3.8e-63 245.0 152 77.0
ATR0127G028 Amborella trichopoda HOM05D005139 ORTHO05D006125 6.5e-63 244.2 152 77.6
HanXRQChr11g0331031 Helianthus annuus HOM05D005139 ORTHO05D006125 1.1e-62 243.4 152 77.6
arahy.Tifrunner.gnm1.ann1.405FF9 Arachis hypogaea HOM05D005139 ORTHO05D006125 1.5e-62 243.0 152 77.6
arahy.Tifrunner.gnm1.ann1.J0RB3X Arachis hypogaea HOM05D005139 ORTHO05D006125 1.5e-62 243.0 152 77.6
Ca_28352_v3 Cicer arietinum L. HOM05D005139 ORTHO05D006125 1.5e-62 243.0 152 77.6
COL.COLO4_17530 Corchorus olitorius HOM05D005139 ORTHO05D006125 1.5e-62 243.0 152 75.0
MBI06_g15765_MAGBIO Magnolia biondii HOM05D005139 ORTHO05D006125 1.5e-62 243.0 144 79.9
Ah.04g164210 Amaranthus hybridus HOM05D005139 ORTHO05D006125 1.9e-62 242.7 152 75.7
AT1G78770 Arabidopsis thaliana HOM05D005139 ORTHO05D006125 3.2e-62 241.9 152 76.3
AL2G39160 Arabidopsis lyrata HOM05D005139 ORTHO05D006125 4.2e-62 241.5 152 76.3
Carub.0002s2560 Capsella rubella HOM05D005139 ORTHO05D006125 4.2e-62 241.5 152 76.3
FvH4_3g18210 Fragaria vesca HOM05D005139 ORTHO05D006125 5.5e-62 241.1 152 75.7
FAN16G0871 Fragaria x ananassa HOM05D005139 ORTHO05D006125 5.5e-62 241.1 152 75.7
RcHm_v2.0_Chr5g0030761 Rosa chinensis HOM05D005139 ORTHO05D006125 9.4e-62 240.4 152 75.0
CARHR072310 Cardamine hirsuta HOM05D005139 ORTHO05D006125 1.2e-61 240.0 152 75.7
FAN21G0160 Fragaria x ananassa HOM05D005139 ORTHO05D006125 2.1e-61 239.2 151 75.5
Lj8A148G34 Lonicera japonica HOM05D005139 ORTHO05D006125 2.1e-61 239.2 174 70.1
FAN25G1917 Fragaria x ananassa HOM05D005139 ORTHO05D006125 2.7e-61 238.8 152 74.3
FAN11G0516 Fragaria x ananassa HOM05D005139 ORTHO05D006125 4.7e-61 238.0 152 75.0
Sc03g0010570 Simmondsia chinensis HOM05D005139 ORTHO05D006125 1.1e-59 233.4 152 71.7
Haze_09316 Corylus avellana HOM05D005139 ORTHO05D006125 7.5e-59 230.7 182 64.3
Os03g0236966 Oryza sativa ssp. japonica HOM05D005139 ORTHO05D006125 7.5e-59 230.7 152 72.4
vmacro11947 Vaccinium macrocarpon HOM05D005139 ORTHO05D006125 1.3e-58 229.9 217 57.1
Zm00001eb399210 Zea mays HOM05D005139 ORTHO05D006125 2.2e-58 229.2 152 73.0
SHI27616 Sapria himalayana HOM05D005139 ORTHO05D006125 1.1e-57 226.9 152 72.4
BolC6t40284H Brassica oleracea HOM05D005139 ORTHO05D006125 7.7e-56 220.7 139 74.8
AUR62019588 Chenopodium quinoa HOM05D005139 ORTHO05D006125 2.5e-54 215.7 152 69.1
Cpa.g.sc77.24 Carica papaya HOM05D005139 ORTHO05D006125 7.2e-54 214.2 127 81.1
Medtr8g058380 Medicago truncatula HOM05D005139 ORTHO05D006125 1.6e-53 213.0 153 69.3
QL08p026113 Quercus lobata HOM05D005139 ORTHO05D006125 4.0e-52 208.4 152 69.1
unitig_26.g9517 Utricularia gibba HOM05D005139 ORTHO05D006125 6.8e-52 207.6 134 73.9
Ciclev10023736m.g Citrus clementina HOM05D005139 ORTHO05D006125 7.0e-49 197.6 152 65.8
Ciclev10023923m.g Citrus clementina HOM05D005139 ORTHO05D006125 2.7e-48 195.7 152 65.1
Pp3c16_8790 Physcomitrium patens HOM05D005139 ORTHO05D006125 1.7e-47 193.0 153 62.1
CDE06G2579 Ceratophyllum demersum HOM05D005139 ORTHO05D006125 3.8e-47 191.8 132 68.2
MD00G1077100 Malus domestica HOM05D005139 ORTHO05D006125 1.6e-45 186.4 171 59.1
Mapoly0145s0019 Marchantia polymorpha HOM05D005139 ORTHO05D006125 5.2e-44 181.4 154 57.8
Aqoxy256s002 Aquilegia oxysepala HOM05D005139 ORTHO05D006125 9.8e-43 177.2 110 77.3
CBR_g50375 Chara braunii HOM05D005139 ORTHO05D006125 4.1e-41 171.8 150 55.3
SMO244G0086 Selaginella moellendorffii HOM05D005139 ORTHO05D006125 8.9e-36 154.1 145 51.7
MD03G1275800 Malus domestica HOM05D005139 ORTHO05D006125 7.8e-32 141.0 85 81.2
Prupe.4G162300 Prunus persica HOM05D005139 ORTHO05D006125 4.1e-25 118.6 70 74.3
Cre13.g562950 Chlamydomonas reinhardtii HOM05D005139 ORTHO05D006125 1.7e-23 113.2 146 41.8
AagrBONN_evm.TU.Sc2ySwM_368.2003 Anthoceros agrestis HOM05D005139 ORTHO05D006125 1.1e-17 94.0 112 48.2
C03p92750 Brassica napus HOM05D005139 ORTHO05D006125 3.5e-16 89.0 59 67.8
PRCOL_00005307 Prasinoderma coloniale HOM05D005139 ORTHO05D006125 4.6e-16 88.6 184 35.9
MCO01G684 Micromonas commoda HOM05D005139 ORTHO05D006125 3.0e-15 85.9 208 32.7
MD03G1275700 Malus domestica HOM05D005139 ORTHO05D006125 6.8e-12 74.7 38 84.2


User provided reference genes

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