Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_004186 Vanilla planifolia HOM05D006750 ORTHO05D008426 8.3e-96 353.6 166 100.0
Nn7g38126 Nelumbo nucifera HOM05D006750 ORTHO05D008426 4.2e-47 191.8 168 55.4
MELO3C021769.2 Cucumis melo HOM05D006750 ORTHO05D008426 1.3e-45 186.8 166 53.0
TAR627G0115 Trochodendron aralioides HOM05D006750 ORTHO05D008426 3.9e-45 185.3 157 56.1
CsaV3_1G046580 Cucumis sativus L. HOM05D006750 ORTHO05D008426 1.5e-44 183.3 141 55.3
ClCG01G009300 Citrullus lanatus HOM05D006750 ORTHO05D008426 4.3e-44 181.8 148 54.1
Aqoxy1G01469 Aquilegia oxysepala HOM05D006750 ORTHO05D008426 8.1e-43 177.6 166 47.6
GSVIVG01012094001 Vitis vinifera HOM05D006750 ORTHO05D008426 8.1e-43 177.6 151 55.0
CSS0027015 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 5.3e-42 174.9 169 48.5
vmacro03507 Vaccinium macrocarpon HOM05D006750 ORTHO05D008426 6.9e-42 174.5 171 48.0
Eucgr.D01041 Eucalyptus grandis HOM05D006750 ORTHO05D008426 1.5e-41 173.3 152 52.6
SGA_v2.0_scaffold298G47680 Striga asiatica HOM05D006750 ORTHO05D008426 1.5e-41 173.3 160 51.9
Sed0026407 Sechium edule HOM05D006750 ORTHO05D008426 5.8e-41 171.4 143 52.4
CANSAT21G0613 Cannabis sativa HOM05D006750 ORTHO05D008426 9.9e-41 170.6 164 48.2
PGR142G2582 Punica granatum HOM05D006750 ORTHO05D008426 1.3e-40 170.2 145 51.0
Atru.chr12.2220 Acer truncatum HOM05D006750 ORTHO05D008426 1.7e-40 169.9 159 47.8
Manes.11G104340 Manihot esculenta HOM05D006750 ORTHO05D008426 1.7e-40 169.9 165 47.9
Lj1A1143T38 Lonicera japonica HOM05D006750 ORTHO05D008426 2.2e-40 169.5 148 50.0
Thecc.06G141200 Theobroma cacao HOM05D006750 ORTHO05D008426 2.2e-40 169.5 157 51.6
VMungo1215G0360 Vigna mungo HOM05D006750 ORTHO05D008426 2.2e-40 169.5 137 55.5
RcHm_v2.0_Chr5g0019891 Rosa chinensis HOM05D006750 ORTHO05D008426 2.9e-40 169.1 157 49.0
Cc09_g06280 Coffea canephora HOM05D006750 ORTHO05D008426 4.9e-40 168.3 151 50.3
Os02g0168900 Oryza sativa ssp. japonica HOM05D006750 ORTHO05D008426 4.9e-40 168.3 136 56.6
Lj4g0008374 Lotus japonicus HOM05D006750 ORTHO05D008426 6.4e-40 167.9 133 55.6
RhsimUnG0232200 Rhododendron simsii HOM05D006750 ORTHO05D008426 8.4e-40 167.5 156 50.0
Potri.012G120100 Populus trichocarpa HOM05D006750 ORTHO05D008426 1.1e-39 167.2 162 48.8
Potri.012G120220 Populus trichocarpa HOM05D006750 ORTHO05D008426 1.1e-39 167.2 162 48.8
Phvul.003G153500 Phaseolus vulgaris HOM05D006750 ORTHO05D008426 1.4e-39 166.8 137 53.3
Prupe.4G110300 Prunus persica HOM05D006750 ORTHO05D008426 1.4e-39 166.8 164 48.2
TWI63G0081 Tripterygium wilfordii HOM05D006750 ORTHO05D008426 1.4e-39 166.8 145 51.7
DCAR_004323 Daucus carota HOM05D006750 ORTHO05D008426 1.9e-39 166.4 139 52.5
Thecc.06G140200 Theobroma cacao HOM05D006750 ORTHO05D008426 1.9e-39 166.4 157 51.0
Actinidia22388 Actinidia chinensis HOM05D006750 ORTHO05D008426 2.4e-39 166.0 181 46.4
CAN.G1222.19 Capsicum annuum HOM05D006750 ORTHO05D008426 2.4e-39 166.0 158 50.6
Ciclev10016972m.g Citrus clementina HOM05D006750 ORTHO05D008426 2.4e-39 166.0 155 49.0
SalBow8G2736 Salvia bowleyana HOM05D006750 ORTHO05D008426 2.4e-39 166.0 157 50.3
HanXRQChr07g0189661 Helianthus annuus HOM05D006750 ORTHO05D008426 3.2e-39 165.6 139 52.5
MD10G1234600 Malus domestica HOM05D006750 ORTHO05D008426 3.2e-39 165.6 165 46.7
SalBow8G0594 Salvia bowleyana HOM05D006750 ORTHO05D008426 3.2e-39 165.6 158 50.0
FvH4_3g12150 Fragaria vesca HOM05D006750 ORTHO05D008426 5.4e-39 164.9 159 47.8
MSTRG.22268 Avicennia marina HOM05D006750 ORTHO05D008426 7.1e-39 164.5 142 52.1
MD05G1254400 Malus domestica HOM05D006750 ORTHO05D008426 7.1e-39 164.5 165 47.3
FAN16G3293 Fragaria x ananassa HOM05D006750 ORTHO05D008426 9.3e-39 164.1 142 50.7
PSO541G1844 Papaver somniferum HOM05D006750 ORTHO05D008426 9.3e-39 164.1 153 51.0
Gorai.009G437900 Gossypium raimondii HOM05D006750 ORTHO05D008426 1.2e-38 163.7 155 49.7
CiPaw.10G065100 Carya illinoinensis HOM05D006750 ORTHO05D008426 1.6e-38 163.3 143 50.3
FAN25G1681 Fragaria x ananassa HOM05D006750 ORTHO05D008426 2.1e-38 162.9 159 47.2
Gohir.D05G369200 Gossypium hirsutum HOM05D006750 ORTHO05D008426 2.1e-38 162.9 155 49.7
Solyc02g069070.3 Solanum lycopersicum HOM05D006750 ORTHO05D008426 2.1e-38 162.9 158 50.0
Ca_21154_v3 Cicer arietinum L. HOM05D006750 ORTHO05D008426 2.7e-38 162.5 133 54.1
Gohir.A04G017000 Gossypium hirsutum HOM05D006750 ORTHO05D008426 2.7e-38 162.5 155 49.7
Psat0s3953g0080 Pisum sativum HOM05D006750 ORTHO05D008426 4.6e-38 161.8 146 50.7
PSO675G8070 Papaver somniferum HOM05D006750 ORTHO05D008426 6.0e-38 161.4 153 50.3
Dinv11873 Davidia involucrata HOM05D006750 ORTHO05D008426 7.9e-38 161.0 147 51.7
AT2G39440 Arabidopsis thaliana HOM05D006750 ORTHO05D008426 1.0e-37 160.6 160 48.1
Nitab4.5_0003773g0080 Nicotiana tabacum HOM05D006750 ORTHO05D008426 1.3e-37 160.2 157 51.0
AL4G36810 Arabidopsis lyrata HOM05D006750 ORTHO05D008426 1.8e-37 159.8 151 48.3
Carub.0004s2150 Capsella rubella HOM05D006750 ORTHO05D008426 1.8e-37 159.8 155 49.0
Sabra15G0136900 Salix brachista HOM05D006750 ORTHO05D008426 1.8e-37 159.8 150 52.0
BraA05t19661Z Brassica rapa HOM05D006750 ORTHO05D008426 2.3e-37 159.5 152 48.7
BcaC02g11618 Brassica carinata HOM05D006750 ORTHO05D008426 3.0e-37 159.1 152 48.7
C04p13120 Brassica napus HOM05D006750 ORTHO05D008426 3.0e-37 159.1 152 48.7
Nitab4.5_0002056g0050 Nicotiana tabacum HOM05D006750 ORTHO05D008426 3.0e-37 159.1 157 51.0
BolC4t22432H Brassica oleracea HOM05D006750 ORTHO05D008426 3.9e-37 158.7 152 48.7
CARHR134300 Cardamine hirsuta HOM05D006750 ORTHO05D008426 5.1e-37 158.3 156 48.1
CDE06G2778 Ceratophyllum demersum HOM05D006750 ORTHO05D008426 5.1e-37 158.3 126 57.1
Duzib235G0570 Durio zibethinus HOM05D006750 ORTHO05D008426 8.7e-37 157.5 142 51.4
Migut.M01971 Erythranthe guttata HOM05D006750 ORTHO05D008426 8.7e-37 157.5 155 45.8
BcaB02g09122 Brassica carinata HOM05D006750 ORTHO05D008426 1.5e-36 156.8 163 46.6
Lsat_1_v5_gn_5_36321 Lactuca sativa HOM05D006750 ORTHO05D008426 1.5e-36 156.8 139 49.6
ECA246G4127 Erigeron canadensis HOM05D006750 ORTHO05D008426 2.5e-36 156.0 125 52.0
Sp4g21740 Schrenkiella parvula HOM05D006750 ORTHO05D008426 2.5e-36 156.0 151 48.3
BcaC02g12068 Brassica carinata HOM05D006750 ORTHO05D008426 3.3e-36 155.6 152 48.0
A05p06970 Brassica napus HOM05D006750 ORTHO05D008426 3.3e-36 155.6 161 47.2
C04p08300 Brassica napus HOM05D006750 ORTHO05D008426 3.3e-36 155.6 152 47.4
Thhalv10017350m.g Eutrema salsugineum HOM05D006750 ORTHO05D008426 3.3e-36 155.6 155 45.8
Oeu052673.2 Olea europaea HOM05D006750 ORTHO05D008426 7.4e-36 154.5 155 48.4
Glyma.02G206800 Glycine max HOM05D006750 ORTHO05D008426 1.3e-35 153.7 132 55.3
CSS0019703 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 2.1e-35 152.9 150 47.3
EL10Ac2g02809 Beta vulgaris HOM05D006750 ORTHO05D008426 6.2e-35 151.4 174 47.7
THA.LOC104824253 Tarenaya hassleriana HOM05D006750 ORTHO05D008426 6.2e-35 151.4 162 45.7
TPR.G24866 Trifolium pratense HOM05D006750 ORTHO05D008426 1.4e-34 150.2 130 50.0
Haze_06024 Corylus avellana HOM05D006750 ORTHO05D008426 3.1e-34 149.1 140 48.6
Haze_06026 Corylus avellana HOM05D006750 ORTHO05D008426 3.1e-34 149.1 140 48.6
unitig_748.g7497 Utricularia gibba HOM05D006750 ORTHO05D008426 3.1e-34 149.1 164 43.9
Hma1.2p1_0040F.1_g025070 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 3.4e-33 145.6 127 51.2
Sp4g08180 Schrenkiella parvula HOM05D006750 ORTHO05D008426 1.3e-32 143.7 157 42.7
AUR62007362 Chenopodium quinoa HOM05D006750 ORTHO05D008426 4.2e-31 138.7 138 48.6
QL11p018076 Quercus lobata HOM05D006750 ORTHO05D008426 7.1e-31 137.9 141 47.5
AUR62018626 Chenopodium quinoa HOM05D006750 ORTHO05D008426 2.1e-30 136.3 138 48.6
arahy.Tifrunner.gnm1.ann1.RPZE8L Arachis hypogaea HOM05D006750 ORTHO05D008426 3.5e-30 135.6 131 46.6
arahy.Tifrunner.gnm1.ann1.8322W6 Arachis hypogaea HOM05D006750 ORTHO05D008426 4.6e-30 135.2 131 46.6
Lalb_Chr02g0152091 Lupinus albus HOM05D006750 ORTHO05D008426 6.0e-30 134.8 136 46.3
ATR0763G132 Amborella trichopoda HOM05D006750 ORTHO05D008426 8.7e-29 131.0 163 42.9
Sc05g0005750 Simmondsia chinensis HOM05D006750 ORTHO05D008426 3.7e-27 125.6 132 47.7
Mapoly0007s0049 Marchantia polymorpha HOM05D006750 ORTHO05D008426 4.8e-27 125.2 143 42.7
Ah.12g055560 Amaranthus hybridus HOM05D002269 ORTHO05D002421 1.4e-26 123.6 176 42.0
COL.COLO4_30981 Corchorus olitorius HOM05D006750 ORTHO05D008426 1.4e-26 123.6 104 54.8
SMO367G1186 Selaginella moellendorffii HOM05D006750 ORTHO05D008426 6.9e-26 121.3 122 41.0
CBR_g39953 Chara braunii HOM05D006750 ORTHO05D008426 4.5e-25 118.6 179 31.8
Cfa000723 Carpinus fangiana HOM05D006750 ORTHO05D008426 1.0e-24 117.5 102 52.0
Aa31LG5G20440 Aethionema arabicum HOM05D004294 ORTHO05D004899 5.0e-24 115.2 115 46.1
Pp3c2_9480 Physcomitrium patens HOM05D006750 ORTHO05D008426 7.1e-23 111.3 136 39.0
Hma1.2p1_0040F.1_g025080 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 9.7e-20 100.9 90 52.2
Peaxi162Scf00149g00921 Petunia axillaris HOM05D006750 ORTHO05D008426 9.7e-20 100.9 157 37.6
CARHR087370 Cardamine hirsuta HOM05D006750 ORTHO05D008426 1.4e-18 97.1 84 52.4
Zm00001eb233030 Zea mays HOM05D006750 ORTHO05D008426 1.4e-18 97.1 129 38.8
Hund11170 Selenicereus undatus HOM05D006750 ORTHO05D008426 3.1e-18 95.9 89 53.9
SHI31544 Sapria himalayana HOM05D006750 ORTHO05D008426 5.3e-18 95.1 219 28.3
Cre08.g378100 Chlamydomonas reinhardtii HOM05D006750 ORTHO05D008426 3.4e-17 92.4 133 36.8
AagrBONN_evm.TU.Sc2ySwM_344.3424 Anthoceros agrestis HOM05D006750 ORTHO05D008426 4.5e-17 92.0 94 43.6
Cpa.g.sc135.32 Carica papaya HOM05D006750 ORTHO05D008426 3.8e-16 89.0 65 58.5
Zm00001eb233050 Zea mays HOM05D006750 ORTHO05D008426 5.7e-12 75.1 99 39.4
Sopen02g018170 Solanum pennellii HOM05D006750 ORTHO05D008426 3.1e-10 69.3 62 48.4
PRCOL_00005799 Prasinoderma coloniale HOM05D006750 ORTHO05D008426 1.0e-08 64.3 120 31.7
Hund11169 Selenicereus undatus HOM05D006750 ORTHO05D008426 1.7e-08 63.5 92 41.3
MBI18_g36125_MAGBIO Magnolia biondii HOM05D003289 ORTHO05D018396 5.0e-08 62.0 69 39.1
TPR.G24917 Trifolium pratense HOM05D006750 ORTHO05D008426 3.2e-07 59.3 38 57.9


User provided reference genes

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