Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_004109 Vanilla planifolia HOM05D006144 ORTHO05D006357 0.0e+00 1659.0 832 100.0
HPP92_004081 Vanilla planifolia HOM05D006144 ORTHO05D006357 0.0e+00 1478.4 752 98.4
MBI06_g08189_MAGBIO Magnolia biondii HOM05D006144 ORTHO05D006357 3.1e-143 513.5 746 40.6
CSS0009151 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 5.2e-130 469.5 784 37.0
Thecc.01G052700 Theobroma cacao HOM05D006144 ORTHO05D006357 8.8e-130 468.8 767 37.3
CSS0011451 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 1.2e-129 468.4 784 36.9
Rhsim10G0119800 Rhododendron simsii HOM05D006144 ORTHO05D006357 7.5e-129 465.7 774 36.8
Nn1g05861 Nelumbo nucifera HOM05D006144 ORTHO05D006357 3.7e-128 463.4 722 39.6
QL06p042250 Quercus lobata HOM05D006144 ORTHO05D006357 4.9e-128 463.0 775 37.7
Nn5g30196 Nelumbo nucifera HOM05D006144 ORTHO05D006357 1.8e-127 461.1 700 38.9
Os03g0186500 Oryza sativa ssp. japonica HOM05D006144 ORTHO05D006357 4.1e-127 459.9 702 39.5
Atru.chr3.396 Acer truncatum HOM05D006144 ORTHO05D006357 1.2e-126 458.4 778 35.5
Haze_15426 Corylus avellana HOM05D006144 ORTHO05D006357 2.0e-126 457.6 792 36.9
Zm00001eb006470 Zea mays HOM05D006144 ORTHO05D006357 1.3e-125 454.9 743 37.3
PGSC0003DMG400019754 Solanum tuberosum HOM05D006144 ORTHO05D006357 8.6e-125 452.2 746 35.9
Cfa003998 Carpinus fangiana HOM05D006144 ORTHO05D006357 1.5e-124 451.4 790 36.3
Actinidia36503 Actinidia chinensis HOM05D006144 ORTHO05D006357 9.5e-124 448.7 736 37.5
Duzib147G1467 Durio zibethinus HOM05D006144 ORTHO05D006357 1.6e-123 448.0 712 37.8
COL.COLO4_22183 Corchorus olitorius HOM05D006144 ORTHO05D006357 1.0e-122 445.3 709 37.4
Oeu049306.1 Olea europaea HOM05D006144 ORTHO05D006357 1.0e-122 445.3 723 37.8
CAN.G11.1 Capsicum annuum HOM05D006144 ORTHO05D006357 2.3e-122 444.1 793 35.1
Actinidia12060 Actinidia chinensis HOM05D006144 ORTHO05D006357 3.0e-122 443.7 707 37.5
Dinv29969 Davidia involucrata HOM05D006144 ORTHO05D006357 1.2e-121 441.8 700 38.9
Gohir.A11G046100 Gossypium hirsutum HOM05D006144 ORTHO05D006357 2.0e-121 441.0 700 38.1
Sopen03g008900 Solanum pennellii HOM05D006144 ORTHO05D006357 9.8e-121 438.7 783 34.2
Gohir.D11G049700 Gossypium hirsutum HOM05D006144 ORTHO05D006357 2.2e-120 437.6 700 37.0
Oeu003786.1 Olea europaea HOM05D006144 ORTHO05D006357 2.2e-120 437.6 705 37.6
Gorai.007G053500 Gossypium raimondii HOM05D006144 ORTHO05D006357 3.7e-120 436.8 700 37.0
Solyc03g044620.4 Solanum lycopersicum HOM05D006144 ORTHO05D006357 8.3e-120 435.6 784 34.2
Ciclev10024721m.g Citrus clementina HOM05D006144 ORTHO05D006357 2.4e-119 434.1 782 36.3
DCAR_025720 Daucus carota HOM05D006144 ORTHO05D006357 7.0e-119 432.6 700 36.9
CSS0044544 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 9.2e-119 432.2 693 37.7
Cc07_g05860 Coffea canephora HOM05D006144 ORTHO05D006357 1.3e-117 428.3 767 35.2
Potri.007G041300 Populus trichocarpa HOM05D006144 ORTHO05D006357 1.7e-117 427.9 792 35.9
Manes.12G100500 Manihot esculenta HOM05D006144 ORTHO05D006357 8.6e-117 425.6 785 35.4
Potri.005G136600 Populus trichocarpa HOM05D006144 ORTHO05D006357 8.6e-117 425.6 777 35.3
Migut.H00451 Erythranthe guttata HOM05D006144 ORTHO05D006357 3.3e-116 423.7 679 37.1
Peaxi162Scf00183g00711 Petunia axillaris HOM05D006144 ORTHO05D006357 7.3e-116 422.5 791 34.6
Sabra07G0036900 Salix brachista HOM05D006144 ORTHO05D006357 3.6e-115 420.2 753 35.6
TWI09G0039 Tripterygium wilfordii HOM05D006144 ORTHO05D006357 1.4e-114 418.3 570 41.6
Hma1.2p1_0200F.1_g086100 Hydrangea macrophylla HOM05D006144 ORTHO05D006357 2.3e-114 417.5 777 34.7
Nitab4.5_0001684g0030 Nicotiana tabacum HOM05D006144 ORTHO05D006357 2.3e-114 417.5 579 40.4
CANSAT01G0270 Cannabis sativa HOM05D006144 ORTHO05D006357 2.0e-113 414.5 765 34.1
MD02G1169100 Malus domestica HOM05D006144 ORTHO05D006357 2.0e-113 414.5 780 33.8
Aqoxy6G01406 Aquilegia oxysepala HOM05D006144 ORTHO05D006357 9.8e-113 412.1 751 36.5
Nitab4.5_0000382g0030 Nicotiana tabacum HOM05D006144 ORTHO05D006357 1.7e-112 411.4 582 39.9
RcHm_v2.0_Chr2g0105021 Rosa chinensis HOM05D006144 ORTHO05D006357 1.7e-112 411.4 708 35.6
CiPaw.01G021400 Carya illinoinensis HOM05D006144 ORTHO05D006357 2.2e-112 411.0 763 34.2
Ca_24781_v3 Cicer arietinum L. HOM05D006144 ORTHO05D006357 8.3e-112 409.1 760 35.4
vmacro05326 Vaccinium macrocarpon HOM05D006144 ORTHO05D006357 2.3e-109 401.0 845 31.7
ATR0104G015 Amborella trichopoda HOM05D006144 ORTHO05D006357 6.6e-109 399.4 687 35.4
Prupe.7G136200 Prunus persica HOM05D006144 ORTHO05D006357 1.9e-108 397.9 778 33.4
TPR.G31101 Trifolium pratense HOM05D006144 ORTHO05D006357 1.9e-108 397.9 788 34.4
FAN28G0789 Fragaria x ananassa HOM05D006144 ORTHO05D006357 2.5e-108 397.5 706 33.6
MSTRG.2895 Avicennia marina HOM05D006144 ORTHO05D006357 5.6e-108 396.4 800 33.4
CsaV3_6G043130 Cucumis sativus L. HOM05D006144 ORTHO05D006357 6.2e-107 392.9 702 35.9
Phvul.002G020300 Phaseolus vulgaris HOM05D006144 ORTHO05D006357 1.1e-106 392.1 789 34.0
FvH4_1g15710 Fragaria vesca HOM05D006144 ORTHO05D006357 1.4e-106 391.7 711 33.2
FAN23G0857 Fragaria x ananassa HOM05D006144 ORTHO05D006357 2.3e-106 391.0 706 33.1
FAN26G0177 Fragaria x ananassa HOM05D006144 ORTHO05D006357 2.3e-106 391.0 788 32.1
MD15G1281500 Malus domestica HOM05D006144 ORTHO05D006357 5.2e-106 389.8 780 33.1
FAN19G3143 Fragaria x ananassa HOM05D006144 ORTHO05D006357 1.5e-105 388.3 711 33.3
VMungo1215G0092 Vigna mungo HOM05D006144 ORTHO05D006357 4.4e-105 386.7 784 33.9
Glyma.11G057500 Glycine max HOM05D006144 ORTHO05D006357 6.4e-104 382.9 774 33.6
Psat0s3889g0080 Pisum sativum HOM05D006144 ORTHO05D006357 3.2e-103 380.6 723 34.4
Glyma.01G184700 Glycine max HOM05D006144 ORTHO05D006357 5.4e-103 379.8 787 33.8
ClCG01G016710 Citrullus lanatus HOM05D006144 ORTHO05D006357 1.2e-102 378.6 703 35.1
Sed0018548 Sechium edule HOM05D006144 ORTHO05D006357 1.2e-102 378.6 699 35.6
CDE03G0440 Ceratophyllum demersum HOM05D006144 ORTHO05D006357 4.6e-102 376.7 636 37.9
Lalb_Chr16g0388301 Lupinus albus HOM05D006144 ORTHO05D006357 7.8e-102 375.9 584 37.0
Lalb_Chr09g0333701 Lupinus albus HOM05D006144 ORTHO05D006357 2.3e-101 374.4 769 33.2
MELO3C007550.2 Cucumis melo HOM05D006144 ORTHO05D006357 3.0e-101 374.0 598 37.3
Eucgr.H01999 Eucalyptus grandis HOM05D006144 ORTHO05D006357 5.1e-101 373.2 572 37.4
Lj2g0024358 Lotus japonicus HOM05D006144 ORTHO05D006357 6.6e-101 372.9 790 32.5
arahy.Tifrunner.gnm1.ann1.IY5EPV Arachis hypogaea HOM05D006144 ORTHO05D006357 4.3e-100 370.2 563 37.1
arahy.Tifrunner.gnm1.ann1.AH11HU Arachis hypogaea HOM05D006144 ORTHO05D006357 2.1e-99 367.9 563 36.9
Hund13563 Selenicereus undatus HOM05D006144 ORTHO05D006357 1.9e-95 354.8 689 32.4
PGR102G0121 Punica granatum HOM05D006144 ORTHO05D006357 1.2e-94 352.1 642 36.1
THA.LOC104826201 Tarenaya hassleriana HOM05D006144 ORTHO05D006357 3.0e-93 347.4 828 31.4
Lj4A140T30 Lonicera japonica HOM05D006144 ORTHO05D006357 3.9e-93 347.1 653 33.5
HanXRQChr14g0430551 Helianthus annuus HOM05D006144 ORTHO05D006357 6.6e-93 346.3 683 33.8
SGA_v2.0_scaffold204G41590 Striga asiatica HOM05D006144 ORTHO05D006357 6.6e-93 346.3 813 31.6
ECA232G0891 Erigeron canadensis HOM05D006144 ORTHO05D006357 1.5e-89 335.1 681 33.3
EL10Ac6g15152 Beta vulgaris HOM05D006144 ORTHO05D006357 3.4e-89 334.0 573 32.6
Dinv39873 Davidia involucrata HOM05D006144 ORTHO05D006357 1.4e-87 328.6 693 32.8
Sc03g0001430 Simmondsia chinensis HOM05D006144 ORTHO05D006357 1.4e-87 328.6 675 32.6
AUR62001952 Chenopodium quinoa HOM05D006144 ORTHO05D006357 4.2e-87 327.0 648 32.1
Ah.03g144510 Amaranthus hybridus HOM05D006144 ORTHO05D006357 1.0e-85 322.4 568 34.2
THA.LOC104804508 Tarenaya hassleriana HOM05D006144 ORTHO05D006357 5.6e-84 316.6 609 34.3
AUR62003855 Chenopodium quinoa HOM05D006144 ORTHO05D006357 6.9e-82 309.7 654 30.4
Lsat_1_v5_gn_4_167780 Lactuca sativa HOM05D006144 ORTHO05D006357 2.6e-81 307.8 681 31.7
TAR381G0606 Trochodendron aralioides HOM05D006144 ORTHO05D006357 6.4e-80 303.1 512 37.1
Cpa.g.sc55.178 Carica papaya HOM05D006144 ORTHO05D006357 1.5e-73 282.0 559 33.8
Oeu004869.1 Olea europaea HOM05D006144 ORTHO05D006357 1.3e-72 278.9 704 29.7
SEGI_14166 Sequoiadendron giganteum HOM05D006144 ORTHO05D006357 3.5e-62 244.2 502 31.9
Mapoly0063s0038 Marchantia polymorpha HOM05D006144 ORTHO05D006357 7.2e-55 219.9 605 28.1
Mapoly0063s0034 Marchantia polymorpha HOM05D006144 ORTHO05D006357 2.5e-52 211.5 619 27.3
TAR381G1042 Trochodendron aralioides HOM05D006144 ORTHO05D006357 8.8e-37 159.8 153 50.3
GSVIVG01002633001 Vitis vinifera HOM05D006144 ORTHO05D006357 4.4e-36 157.5 138 54.3
Lj4C140T7 Lonicera japonica HOM05D006144 ORTHO05D006357 9.1e-34 149.8 133 54.1
Psat4g089200 Pisum sativum HOM05D006144 ORTHO05D006357 1.5e-31 142.5 281 33.1
PSO541G4136 Papaver somniferum HOM05D006144 ORTHO05D006357 6.1e-30 137.1 156 46.2
Cpa.g.sc55.182 Carica papaya HOM05D006144 ORTHO05D006357 3.0e-29 134.8 134 50.7
PSO675G0817 Papaver somniferum HOM05D006144 ORTHO05D006357 4.0e-29 134.4 157 45.2
Ca_22186_v3 Cicer arietinum L. HOM05D006144 ORTHO05D006357 2.0e-28 132.1 253 33.6
TPR.G640 Trifolium pratense HOM05D006144 ORTHO05D006357 1.1e-26 126.3 140 47.9
unitig_736.g22372 Utricularia gibba HOM05D006144 ORTHO05D006357 1.4e-26 125.9 145 42.1
SMO301G0037 Selaginella moellendorffii HOM05D006144 ORTHO05D006357 2.4e-26 125.2 588 22.8
MSTRG.23764 Avicennia marina HOM05D006144 ORTHO05D006357 1.9e-23 115.5 164 39.6
SEGI_17223 Sequoiadendron giganteum HOM05D006144 ORTHO05D006357 4.0e-21 107.8 152 37.5
unitig_736.g22373 Utricularia gibba HOM05D006144 ORTHO05D006357 2.8e-19 101.7 253 26.1
Pp3c4_25960 Physcomitrium patens HOM05D006144 ORTHO05D006357 3.8e-16 91.3 381 22.6
Pp3c26_5160 Physcomitrium patens HOM05D006144 ORTHO05D006357 4.2e-15 87.8 377 23.6
Hma1.2p1_1415F.1_g282000 Hydrangea macrophylla HOM05D006144 ORTHO05D006357 5.5e-15 87.4 99 49.5
CBR_g31222 Chara braunii HOM05D006144 ORTHO05D006357 7.2e-15 87.0 146 36.3
unitig_736.g22374 Utricularia gibba HOM05D006144 ORTHO05D006357 1.1e-10 73.2 264 28.4
MCO09G582 Micromonas commoda HOM05D006144 ORTHO05D006357 1.4e-10 72.8 244 22.5


User provided reference genes

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