Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_003909 Vanilla planifolia HOM05D007704 ORTHO05D009758 1.7e-157 559.3 281 100.0
HPP92_003903 Vanilla planifolia HOM05D007704 ORTHO05D009758 2.2e-77 293.1 150 97.3
HPP92_003904 Vanilla planifolia HOM05D007704 ORTHO05D009758 1.6e-51 207.2 110 95.5
TAR626G0172 Trochodendron aralioides HOM05D007704 ORTHO05D009758 4.3e-36 156.0 264 38.3
Nn3g20648 Nelumbo nucifera HOM05D007704 ORTHO05D009758 9.5e-36 154.8 254 37.0
ATR0757G094 Amborella trichopoda HOM05D007704 ORTHO05D009758 1.4e-34 151.0 293 36.5
Os01g0246500 Oryza sativa ssp. japonica HOM05D007704 ORTHO05D009758 2.0e-33 147.1 261 39.5
Migut.M00569 Erythranthe guttata HOM05D007704 ORTHO05D009758 5.8e-33 145.6 266 35.3
CDE09G0200 Ceratophyllum demersum HOM05D007704 ORTHO05D009758 7.6e-33 145.2 229 37.6
SGA_v2.0_scaffold70G23621 Striga asiatica HOM05D007704 ORTHO05D009758 3.8e-32 142.9 252 33.7
Aqoxy4G00112 Aquilegia oxysepala HOM05D007704 ORTHO05D009758 6.4e-32 142.1 285 33.3
COL.COLO4_08458 Corchorus olitorius HOM05D007704 ORTHO05D009758 8.4e-32 141.7 256 37.5
MSTRG.15037 Avicennia marina HOM05D007704 ORTHO05D009758 7.1e-31 138.7 274 34.7
Ciclev10032332m.g Citrus clementina HOM05D007704 ORTHO05D009758 7.8e-30 135.2 261 35.6
Zm00001eb118790 Zea mays HOM05D007704 ORTHO05D009758 7.8e-30 135.2 266 38.0
AUR62000092 Chenopodium quinoa HOM05D007704 ORTHO05D009758 1.0e-29 134.8 278 33.8
GSVIVG01020855001 Vitis vinifera HOM05D007704 ORTHO05D009758 1.0e-29 134.8 276 35.5
MBI07_g07812_MAGBIO Magnolia biondii HOM05D007704 ORTHO05D009758 1.3e-29 134.4 264 34.1
Peaxi162Scf00789g00013 Petunia axillaris HOM05D007704 ORTHO05D009758 2.3e-29 133.7 250 35.2
Sc16g0011630 Simmondsia chinensis HOM05D007704 ORTHO05D009758 2.3e-29 133.7 241 36.5
Hund07540 Selenicereus undatus HOM05D008449 ORTHO05D010615 3.0e-29 133.3 259 33.2
Cc05_g09660 Coffea canephora HOM05D007704 ORTHO05D009758 1.1e-28 131.3 279 34.4
Gohir.D04G035566 Gossypium hirsutum HOM05D007704 ORTHO05D009758 4.3e-28 129.4 254 36.2
PGSC0003DMG400007847 Solanum tuberosum HOM05D007704 ORTHO05D009758 4.3e-28 129.4 246 33.3
TWI59G0036 Tripterygium wilfordii HOM05D007704 ORTHO05D009758 9.6e-28 128.3 264 35.6
Thecc.01G163800 Theobroma cacao HOM05D007704 ORTHO05D009758 1.2e-27 127.9 251 35.5
Solyc12g011190.2 Solanum lycopersicum HOM05D007704 ORTHO05D009758 1.6e-27 127.5 246 33.3
Sopen12g006550 Solanum pennellii HOM05D007704 ORTHO05D009758 2.8e-27 126.7 246 33.3
Gohir.A05G379900 Gossypium hirsutum HOM05D007704 ORTHO05D009758 3.6e-27 126.3 254 36.2
Potri.002G058800 Populus trichocarpa HOM05D007704 ORTHO05D009758 3.6e-27 126.3 262 35.5
Gorai.012G040100 Gossypium raimondii HOM05D007704 ORTHO05D009758 6.2e-27 125.6 260 36.2
Atru.chr6.2068_Atru.chr6.2069 Acer truncatum HOM05D007704 ORTHO05D009758 1.4e-26 124.4 260 33.5
EL10Ac4g10303 Beta vulgaris HOM05D007704 ORTHO05D009758 1.8e-26 124.0 265 32.5
QL08p044652 Quercus lobata HOM05D007704 ORTHO05D009758 5.2e-26 122.5 294 30.3
AUR62019264 Chenopodium quinoa HOM05D007704 ORTHO05D009758 2.6e-25 120.2 177 41.2
Ah.06g193590 Amaranthus hybridus HOM05D003002 ORTHO05D003583 3.4e-25 119.8 249 31.7
Sabra02G0047700 Salix brachista HOM05D007704 ORTHO05D009758 3.4e-25 119.8 294 31.0
Nitab4.5_0001232g0110 Nicotiana tabacum HOM05D007704 ORTHO05D009758 5.8e-25 119.0 249 36.5
unitig_85.g27396 Utricularia gibba HOM05D007704 ORTHO05D009758 1.9e-23 114.0 254 32.7
Aqoxy4G03087 Aquilegia oxysepala HOM05D007704 ORTHO05D009758 3.5e-14 83.2 63 55.6
CAN.G164.19 Capsicum annuum HOM05D007704 ORTHO05D009758 4.6e-14 82.8 63 57.1
Gorai.003G063900 Gossypium raimondii HOM05D007704 ORTHO05D009758 1.3e-13 81.3 98 43.9
Glyma.08G308800 Glycine max HOM05D007704 ORTHO05D009758 8.7e-13 78.6 129 41.1
VMungo0540G0710 Vigna mungo HOM05D007704 ORTHO05D009758 2.5e-12 77.0 122 38.5
Gohir.D03G060100 Gossypium hirsutum HOM05D007704 ORTHO05D009758 7.4e-12 75.5 99 41.4
Glyma.18G107800 Glycine max HOM05D007704 ORTHO05D009758 1.3e-11 74.7 137 35.8
Psat0s3897g0040 Pisum sativum HOM05D007704 ORTHO05D009758 2.1e-11 73.9 145 33.1
Medtr3g047590 Medicago truncatula HOM05D007704 ORTHO05D009758 2.8e-11 73.6 147 30.6
Prupe.3G174900 Prunus persica HOM05D007704 ORTHO05D009758 2.8e-11 73.6 157 33.1
A09p66950 Brassica napus HOM05D000230 ORTHO05D000176 3.7e-11 73.2 115 38.3
BraA09t42030Z Brassica rapa HOM05D000230 ORTHO05D000176 3.7e-11 73.2 115 38.3
Ca_14608_v3 Cicer arietinum L. HOM05D007704 ORTHO05D009758 3.7e-11 73.2 145 33.1
arahy.Tifrunner.gnm1.ann1.I86J5P Arachis hypogaea HOM05D007704 ORTHO05D009758 8.1e-11 72.0 124 36.3
BcaC07g42062 Brassica carinata HOM05D007704 ORTHO05D009758 1.1e-10 71.6 115 34.8
TPR.G16762 Trifolium pratense HOM05D007704 ORTHO05D009758 1.1e-10 71.6 150 32.7
RcHm_v2.0_Chr2g0151721 Rosa chinensis HOM05D007704 ORTHO05D009758 1.8e-10 70.9 170 29.4
Sp1g05260 Schrenkiella parvula HOM05D007704 ORTHO05D009758 4.0e-10 69.7 116 37.1
Thhalv10009066m.g Eutrema salsugineum HOM05D007704 ORTHO05D009758 6.9e-10 68.9 115 35.7
PGR042G3448 Punica granatum HOM05D007704 ORTHO05D009758 6.9e-10 68.9 118 33.1
Sed0015338 Sechium edule HOM05D007704 ORTHO05D009758 6.9e-10 68.9 146 32.9
THA.LOC104800828 Tarenaya hassleriana HOM05D007704 ORTHO05D009758 6.9e-10 68.9 120 33.3
arahy.Tifrunner.gnm1.ann1.Q0GQHR Arachis hypogaea HOM05D007704 ORTHO05D009758 9.0e-10 68.6 124 35.5
C08p51180 Brassica napus HOM05D007704 ORTHO05D009758 9.0e-10 68.6 115 35.7
BolC8t52645H Brassica oleracea HOM05D000230 ORTHO05D000176 9.0e-10 68.6 115 35.7
THA.LOC104827393 Tarenaya hassleriana HOM05D007704 ORTHO05D009758 9.0e-10 68.6 120 35.8
Cpa.g.sc50.98 Carica papaya HOM05D007704 ORTHO05D009758 1.5e-09 67.8 179 31.3
Phvul.006G032200 Phaseolus vulgaris HOM05D007704 ORTHO05D009758 1.5e-09 67.8 122 34.4
Haze_13518 Corylus avellana HOM05D007704 ORTHO05D009758 2.6e-09 67.0 137 32.8
CARHR006110 Cardamine hirsuta HOM05D007704 ORTHO05D009758 5.8e-09 65.9 115 36.5
Eucgr.A01992 Eucalyptus grandis HOM05D007704 ORTHO05D009758 7.6e-09 65.5 129 33.3
FvH4_6g38470 Fragaria vesca HOM05D007704 ORTHO05D009758 7.6e-09 65.5 175 26.9
MD17G1137700 Malus domestica HOM05D007704 ORTHO05D009758 7.6e-09 65.5 137 31.4
FAN02G0747 Fragaria x ananassa HOM05D007704 ORTHO05D009758 1.7e-08 64.3 175 26.9
AL1G16520 Arabidopsis lyrata HOM05D007704 ORTHO05D009758 2.9e-08 63.5 117 35.0
FAN09G1582 Fragaria x ananassa HOM05D007704 ORTHO05D009758 2.9e-08 63.5 174 27.0
Carub.0001s0586 Capsella rubella HOM05D007704 ORTHO05D009758 3.8e-08 63.2 115 32.2
FvH4_6g38482 Fragaria vesca HOM05D007704 ORTHO05D009758 3.8e-08 63.2 174 27.0
FAN14G3331 Fragaria x ananassa HOM05D007704 ORTHO05D009758 3.8e-08 63.2 174 27.0
SEGI_16323 Sequoiadendron giganteum HOM05D007704 ORTHO05D009758 8.4e-08 62.0 187 27.8
DCAR_013319 Daucus carota HOM05D007704 ORTHO05D009758 1.1e-07 61.6 216 27.8
CARHR197210 Cardamine hirsuta HOM05D004557 ORTHO05D005258 4.2e-07 59.7 69 44.9
AT1G06500 Arabidopsis thaliana HOM05D007704 ORTHO05D009758 7.1e-07 58.9 117 32.5
Lj6g0009873 Lotus japonicus HOM05D007704 ORTHO05D009758 1.2e-06 58.2 202 25.7
Manes.02G113900 Manihot esculenta HOM05D001516 ORTHO05D001357 1.2e-06 58.2 71 43.7
Aa31LG1G7580 Aethionema arabicum HOM05D007704 ORTHO05D009758 1.6e-06 57.8 110 34.5
Aa31LG6G12560 Aethionema arabicum HOM05D001516 ORTHO05D001357 1.6e-06 57.8 46 60.9
CBR_g4496 Chara braunii HOM05D004557 ORTHO05D005258 1.6e-06 57.8 113 34.5
Lalb_Chr19g0132651 Lupinus albus HOM05D004557 ORTHO05D005258 2.1e-06 57.4 91 39.6
Nn5g28590 Nelumbo nucifera HOM05D004557 ORTHO05D005258 2.1e-06 57.4 49 53.1
TWI09G1104 Tripterygium wilfordii HOM05D001516 ORTHO05D001357 2.1e-06 57.4 71 43.7
Aqoxy6G01631 Aquilegia oxysepala HOM05D001516 ORTHO05D001357 2.7e-06 57.0 46 58.7
COL.COLO4_13416 Corchorus olitorius HOM05D001516 ORTHO05D001357 2.7e-06 57.0 63 47.6
Migut.B01423 Erythranthe guttata HOM05D004557 ORTHO05D005258 2.7e-06 57.0 67 43.3
CAN.G164.20 Capsicum annuum HOM05D007704 ORTHO05D009758 3.5e-06 56.6 113 29.2
THA.LOC104821164 Tarenaya hassleriana HOM05D004557 ORTHO05D005258 3.5e-06 56.6 89 39.3
THA.LOC104827156 Tarenaya hassleriana HOM05D004557 ORTHO05D005258 3.5e-06 56.6 77 39.0
Thecc.03G250200 Theobroma cacao HOM05D004557 ORTHO05D005258 3.5e-06 56.6 46 56.5
ECA240G2282 Erigeron canadensis HOM05D004557 ORTHO05D005258 4.6e-06 56.2 49 49.0
Mapoly0049s0118 Marchantia polymorpha HOM05D004557 ORTHO05D005258 4.6e-06 56.2 63 44.4
Nn6g31711 Nelumbo nucifera HOM05D001516 ORTHO05D001357 4.6e-06 56.2 46 60.9
Pp3c24_6460 Physcomitrium patens HOM05D004557 ORTHO05D005258 4.6e-06 56.2 63 44.4
Psat2g149160 Pisum sativum HOM05D001516 ORTHO05D001357 4.6e-06 56.2 54 51.9
SMO114G0100 Selaginella moellendorffii HOM05D001516 ORTHO05D001357 4.6e-06 56.2 48 52.1
SEGI_36367 Sequoiadendron giganteum HOM05D004557 ORTHO05D005258 4.6e-06 56.2 49 53.1
THA.LOC104804550 Tarenaya hassleriana HOM05D001516 ORTHO05D001357 4.6e-06 56.2 46 56.5
Zm00001eb231720 Zea mays HOM05D000455 ORTHO05D000434 4.6e-06 56.2 92 35.9
Actinidia28746 Actinidia chinensis HOM05D002491 ORTHO05D002651 6.0e-06 55.8 60 48.3
Gohir.D03G002200 Gossypium hirsutum HOM05D001516 ORTHO05D001357 6.0e-06 55.8 46 58.7
Gorai.003G002500 Gossypium raimondii HOM05D001516 ORTHO05D001357 6.0e-06 55.8 46 58.7
Lj9C406T5 Lonicera japonica HOM05D000455 ORTHO05D000434 6.0e-06 55.8 219 26.9
Medtr5g024070 Medicago truncatula HOM05D001516 ORTHO05D001357 6.0e-06 55.8 48 56.2
Pp3c20_5720 Physcomitrium patens HOM05D032039 ORTHO05D005258 6.0e-06 55.8 63 44.4
Sabra06G0172400 Salix brachista HOM05D004557 ORTHO05D005258 6.0e-06 55.8 85 36.5
Thecc.01G006000 Theobroma cacao HOM05D001516 ORTHO05D001357 6.0e-06 55.8 46 58.7
ECA238G4466 Erigeron canadensis HOM05D001516 ORTHO05D001357 7.9e-06 55.5 70 42.9
Gohir.A02G177600 Gossypium hirsutum HOM05D001516 ORTHO05D001357 7.9e-06 55.5 60 50.0
HanXRQChr08g0213761 Helianthus annuus HOM05D000455 ORTHO05D000434 7.9e-06 55.5 42 61.9
Hma1.2p1_0231F.1_g097480 Hydrangea macrophylla HOM05D004557 ORTHO05D005258 7.9e-06 55.5 49 46.9
Potri.005G101000 Populus trichocarpa HOM05D001516 ORTHO05D001357 7.9e-06 55.5 46 58.7
Sed0027657 Sechium edule HOM05D004557 ORTHO05D005258 7.9e-06 55.5 49 46.9


User provided reference genes

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