Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_003902 Vanilla planifolia HOM05D006017 ORTHO05D007821 1.9e-291 1005.0 464 100.0
Dinv14956 Davidia involucrata HOM05D006017 ORTHO05D007821 4.8e-226 787.7 439 79.0
PGSC0003DMG400015330 Solanum tuberosum HOM05D006017 ORTHO05D007821 3.4e-224 781.6 448 77.5
Sopen12g005880 Solanum pennellii HOM05D006017 ORTHO05D007821 4.5e-224 781.2 448 77.2
Solyc12g014100.2 Solanum lycopersicum HOM05D006017 ORTHO05D007821 7.7e-224 780.4 448 77.2
ECA240G4517 Erigeron canadensis HOM05D006017 ORTHO05D007821 1.0e-223 780.0 433 79.0
Gorai.002G065000 Gossypium raimondii HOM05D006017 ORTHO05D007821 1.3e-223 779.6 445 77.1
CSS0036883 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 2.2e-223 778.9 440 78.6
Atru.chr2.2344 Acer truncatum HOM05D006017 ORTHO05D007821 5.0e-223 777.7 436 79.6
Gohir.D01G045400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 5.0e-223 777.7 445 76.9
PGR083G0123 Punica granatum HOM05D006017 ORTHO05D007821 5.0e-223 777.7 443 77.4
Peaxi162Scf00000g00262 Petunia axillaris HOM05D006017 ORTHO05D007821 1.4e-222 776.2 439 78.6
Hma1.2p1_0416F.1_g148570 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 1.9e-222 775.8 442 78.1
MSTRG.14945 Avicennia marina HOM05D006017 ORTHO05D007821 2.5e-222 775.4 434 78.3
Gohir.A01G059400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 3.2e-222 775.0 445 76.6
Lj8A152T86 Lonicera japonica HOM05D006017 ORTHO05D007821 3.2e-222 775.0 436 78.4
TWI38G0439 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 4.2e-222 774.6 446 76.7
Thecc.07G102400 Theobroma cacao HOM05D006017 ORTHO05D007821 5.5e-222 774.2 433 79.2
Rhsim04G0023700 Rhododendron simsii HOM05D006017 ORTHO05D007821 1.2e-221 773.1 441 77.6
Prupe.4G172100 Prunus persica HOM05D006017 ORTHO05D007821 1.6e-221 772.7 445 77.3
Aqoxy1G02214 Aquilegia oxysepala HOM05D006017 ORTHO05D007821 2.1e-221 772.3 433 78.1
Sc03g0010290 Simmondsia chinensis HOM05D006017 ORTHO05D007821 6.1e-221 770.8 437 77.8
MBI07_g06432_MAGBIO Magnolia biondii HOM05D006017 ORTHO05D007821 1.0e-220 770.0 434 78.6
PSO541G6385 Papaver somniferum HOM05D006017 ORTHO05D007821 1.0e-220 770.0 437 77.8
Cfa019614 Carpinus fangiana HOM05D006017 ORTHO05D007821 1.4e-220 769.6 432 78.7
Lsat_1_v5_gn_9_98620 Lactuca sativa HOM05D006017 ORTHO05D007821 3.9e-220 768.1 443 75.8
EL10Ac4g08290 Beta vulgaris HOM05D006017 ORTHO05D007821 6.7e-220 767.3 436 78.0
CiPaw.11G165400 Carya illinoinensis HOM05D006017 ORTHO05D007821 6.7e-220 767.3 444 75.9
CiPaw.12G115700 Carya illinoinensis HOM05D006017 ORTHO05D007821 6.7e-220 767.3 439 76.8
Actinidia18784 Actinidia chinensis HOM05D006017 ORTHO05D007821 8.8e-220 766.9 434 77.9
CsaV3_4G008430 Cucumis sativus L. HOM05D006017 ORTHO05D007821 8.8e-220 766.9 436 77.1
Cpa.g.sc131.80 Carica papaya HOM05D006017 ORTHO05D007821 1.5e-219 766.1 450 76.9
ClCG07G009900 Citrullus lanatus HOM05D006017 ORTHO05D007821 1.5e-219 766.1 435 77.5
vmacro09508 Vaccinium macrocarpon HOM05D006017 ORTHO05D007821 2.0e-219 765.8 457 74.4
MELO3C016089.2 Cucumis melo HOM05D006017 ORTHO05D007821 3.3e-219 765.0 457 74.2
RcHm_v2.0_Chr5g0031821 Rosa chinensis HOM05D006017 ORTHO05D007821 1.3e-218 763.1 445 76.4
Migut.M00760 Erythranthe guttata HOM05D006017 ORTHO05D007821 3.7e-218 761.5 431 77.5
THA.LOC104811882 Tarenaya hassleriana HOM05D006017 ORTHO05D007821 4.8e-218 761.1 441 76.0
HanXRQChr03g0070991 Helianthus annuus HOM05D006017 ORTHO05D007821 6.3e-218 760.8 438 76.7
CANSAT35G1773 Cannabis sativa HOM05D006017 ORTHO05D007821 1.1e-217 760.0 436 78.2
Haze_09368 Corylus avellana HOM05D006017 ORTHO05D007821 1.1e-217 760.0 459 74.7
Sed0020976 Sechium edule HOM05D006017 ORTHO05D007821 1.4e-217 759.6 445 75.5
GSVIVG01014248001 Vitis vinifera HOM05D006017 ORTHO05D007821 1.4e-217 759.6 453 75.3
Manes.03G103900 Manihot esculenta HOM05D006017 ORTHO05D007821 1.8e-217 759.2 434 77.4
PSO675G4947 Papaver somniferum HOM05D006017 ORTHO05D007821 5.3e-217 757.7 445 75.7
Cc05_g11510 Coffea canephora HOM05D006017 ORTHO05D007821 9.1e-217 756.9 440 76.1
FAN11G3087 Fragaria x ananassa HOM05D006017 ORTHO05D007821 2.0e-216 755.7 432 76.9
ATR0749G089 Amborella trichopoda HOM05D006017 ORTHO05D007821 7.7e-216 753.8 451 74.7
Phvul.011G148800 Phaseolus vulgaris HOM05D006017 ORTHO05D007821 7.7e-216 753.8 434 77.0
arahy.Tifrunner.gnm1.ann1.FV2XB3 Arachis hypogaea HOM05D006017 ORTHO05D007821 1.0e-215 753.4 434 76.7
CAN.G739.4 Capsicum annuum HOM05D006017 ORTHO05D007821 1.7e-215 752.7 472 72.5
QL08p027671 Quercus lobata HOM05D006017 ORTHO05D007821 1.7e-215 752.7 438 76.0
Potri.001G374100 Populus trichocarpa HOM05D006017 ORTHO05D007821 2.2e-215 752.3 447 76.5
Lalb_Chr03g0030841 Lupinus albus HOM05D006017 ORTHO05D007821 2.9e-215 751.9 432 77.1
arahy.Tifrunner.gnm1.ann1.DSNA77 Arachis hypogaea HOM05D006017 ORTHO05D007821 3.8e-215 751.5 434 76.5
FAN16G2700 Fragaria x ananassa HOM05D006017 ORTHO05D007821 3.8e-215 751.5 432 76.6
Ca_23058_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 6.5e-215 750.7 434 76.5
Ca_30664_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 6.5e-215 750.7 434 76.5
DCAR_028453 Daucus carota HOM05D006017 ORTHO05D007821 6.5e-215 750.7 436 76.1
AUR62019513 Chenopodium quinoa HOM05D006017 ORTHO05D007821 1.1e-214 750.0 451 74.3
Glyma.12G158600 Glycine max HOM05D006017 ORTHO05D007821 1.1e-214 750.0 429 77.6
Lj3g0015312 Lotus japonicus HOM05D006017 ORTHO05D007821 1.1e-214 750.0 433 76.7
Medtr8g463280 Medicago truncatula HOM05D006017 ORTHO05D007821 1.4e-214 749.6 438 75.3
A02p10590 Brassica napus HOM05D006017 ORTHO05D007821 2.5e-214 748.8 438 75.6
BraA02t06124Z Brassica rapa HOM05D006017 ORTHO05D007821 2.5e-214 748.8 438 75.6
BcaB05g22107 Brassica carinata HOM05D006017 ORTHO05D007821 3.2e-214 748.4 438 75.8
Aa31LG3G9950 Aethionema arabicum HOM05D006017 ORTHO05D007821 4.2e-214 748.0 439 74.9
Eucgr.F01184 Eucalyptus grandis HOM05D006017 ORTHO05D007821 1.2e-213 746.5 438 75.3
Eucgr.F01185 Eucalyptus grandis HOM05D006017 ORTHO05D007821 1.6e-213 746.1 438 76.0
VMungo1127G0952 Vigna mungo HOM05D006017 ORTHO05D007821 2.1e-213 745.7 433 76.4
AL8G29200 Arabidopsis lyrata HOM05D006017 ORTHO05D007821 2.7e-213 745.3 433 76.9
C02p17670 Brassica napus HOM05D006017 ORTHO05D007821 3.6e-213 745.0 438 75.3
Psat4g138640 Pisum sativum HOM05D006017 ORTHO05D007821 1.4e-212 743.0 433 76.0
Carub.0008s1436 Capsella rubella HOM05D006017 ORTHO05D007821 2.3e-212 742.3 433 75.8
Sp6g16110 Schrenkiella parvula HOM05D006017 ORTHO05D007821 3.9e-212 741.5 438 75.1
AT5G54080 Arabidopsis thaliana HOM05D006017 ORTHO05D007821 5.1e-212 741.1 433 75.8
CARHR267270 Cardamine hirsuta HOM05D006017 ORTHO05D007821 5.1e-212 741.1 439 75.2
BcaC03g14354 Brassica carinata HOM05D006017 ORTHO05D007821 6.7e-212 740.7 438 74.9
BolC2t07897H Brassica oleracea HOM05D006017 ORTHO05D007821 1.5e-211 739.6 438 74.7
Oeu061327.1 Olea europaea HOM05D006017 ORTHO05D007821 7.4e-211 737.3 475 70.5
Oeu061328.1 Olea europaea HOM05D006017 ORTHO05D007821 7.4e-211 737.3 475 70.5
Sabra16G0246500 Salix brachista HOM05D006017 ORTHO05D007821 1.7e-210 736.1 438 75.8
FAN21G1753 Fragaria x ananassa HOM05D006017 ORTHO05D007821 2.4e-209 732.3 461 71.8
AUR62036125 Chenopodium quinoa HOM05D006017 ORTHO05D007821 3.1e-209 731.9 452 71.9
Nitab4.5_0003077g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 2.0e-208 729.2 465 72.0
Os06g0103300 Oryza sativa ssp. japonica HOM05D006017 ORTHO05D007821 6.1e-205 717.6 433 74.1
unitig_46.g18314 Utricularia gibba HOM05D006017 ORTHO05D007821 3.1e-201 705.3 450 70.2
Zm00001eb379510 Zea mays HOM05D006017 ORTHO05D007821 7.0e-201 704.1 447 71.1
CDE02G3882 Ceratophyllum demersum HOM05D006017 ORTHO05D007821 9.4e-198 693.7 442 70.4
Mapoly0078s0002 Marchantia polymorpha HOM05D006017 ORTHO05D007821 1.4e-196 689.9 457 69.1
Ciclev10008509m.g Citrus clementina HOM05D006017 ORTHO05D007821 1.8e-196 689.5 379 80.5
SGA_v2.0_scaffold73G24213 Striga asiatica HOM05D006017 ORTHO05D007821 2.0e-192 676.0 469 65.9
Ah.04g164440 Amaranthus hybridus HOM05D006017 ORTHO05D007821 3.5e-192 675.2 442 68.1
Nn1g04303 Nelumbo nucifera HOM05D006017 ORTHO05D007821 3.5e-192 675.2 380 78.4
Pp3c16_940 Physcomitrium patens HOM05D006017 ORTHO05D007821 1.3e-186 656.8 452 67.0
Hund22764 Selenicereus undatus HOM05D006017 ORTHO05D007821 4.9e-186 654.8 397 73.0
AagrBONN_evm.TU.Sc2ySwM_228.2578 Anthoceros agrestis HOM05D006017 ORTHO05D007821 1.6e-184 649.8 418 69.9
SMO119G0176 Selaginella moellendorffii HOM05D006017 ORTHO05D007821 5.4e-177 624.8 437 65.4
Duzib170G0488 Durio zibethinus HOM05D006017 ORTHO05D007821 1.3e-175 620.2 438 65.5
Thhalv10013691m.g Eutrema salsugineum HOM05D006017 ORTHO05D007821 1.5e-174 616.7 438 64.8
Nitab4.5_0005445g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 5.8e-171 604.7 414 68.6
Cre02.g091200 Chlamydomonas reinhardtii HOM05D006017 ORTHO05D007821 4.7e-157 558.5 439 61.5
Hma1.2p1_0416F.1_g148580 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 4.0e-156 555.4 307 80.1
FvH4_3g19020 Fragaria vesca HOM05D006017 ORTHO05D007821 1.5e-155 553.5 321 76.0
PRCOL_00000185 Prasinoderma coloniale HOM05D006017 ORTHO05D007821 2.4e-153 546.2 454 57.5
SalBow8G4076 Salvia bowleyana HOM05D006017 ORTHO05D007821 1.1e-150 537.3 301 78.7
TPR.G22540 Trifolium pratense HOM05D006017 ORTHO05D007821 3.4e-147 525.8 377 65.5
MD03G1237500 Malus domestica HOM05D006017 ORTHO05D007821 4.3e-142 508.8 280 78.9
Glyma.06G234200 Glycine max HOM05D006017 ORTHO05D007821 2.5e-126 456.4 276 74.3
CSS0003418 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 5.2e-79 299.3 196 74.0
SEGI_01915 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 7.5e-70 268.9 183 68.9
MD03G1237300 Malus domestica HOM05D006017 ORTHO05D007821 5.4e-68 262.7 178 67.4
FAN25G2436 Fragaria x ananassa HOM05D006017 ORTHO05D007821 8.6e-66 255.4 132 83.3
Glyma.06G234050 Glycine max HOM05D006017 ORTHO05D007821 6.1e-64 249.2 133 83.5
BcaC04g20394 Brassica carinata HOM05D006017 ORTHO05D007821 2.2e-61 240.7 373 41.0
C09p44170 Brassica napus HOM05D006017 ORTHO05D017343 6.4e-61 239.2 216 58.8
Nitab4.5_0004022g0010 Nicotiana tabacum HOM05D006017 ORTHO05D007821 6.8e-55 219.2 120 78.3
Oeu061326.1 Olea europaea HOM05D006017 ORTHO05D007821 1.5e-54 218.0 132 72.0
Rhsim07G0153900 Rhododendron simsii HOM05D006017 ORTHO05D000252 2.6e-54 217.2 216 48.1
TAR436G0001 Trochodendron aralioides HOM05D006017 ORTHO05D007821 7.5e-54 215.7 131 71.8
A10p11370 Brassica napus HOM05D006017 ORTHO05D007821 9.8e-46 188.7 249 49.8
TWI38G1497 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 3.2e-44 183.7 119 71.4
CSS0021316 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 7.8e-43 179.1 116 65.5
SEGI_25954 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 9.9e-30 135.6 92 60.9
HPP92_003866 Vanilla planifolia HOM05D006017 ORTHO05D007821 5.4e-28 129.8 76 86.8
TWI38G0821 Tripterygium wilfordii HOM05D006017 ORTHO05D413584 9.9e-22 109.0 55 85.5
SEGI_23248 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 2.2e-21 107.8 76 57.9
arahy.Tifrunner.gnm1.ann1.EZ2Q4B Arachis hypogaea HOM05D006004 ORTHO05D006976 2.4e-20 104.4 61 77.0
FAN25G2983 Fragaria x ananassa HOM05D006017 ORTHO05D007821 6.0e-19 99.8 91 51.6
BolC9t57289H Brassica oleracea HOM05D006017 ORTHO05D104628 1.1e-17 95.5 186 33.3
BraA10t43231Z Brassica rapa HOM05D006017 ORTHO05D017343 6.2e-16 89.7 68 61.8
CSS0031230 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 4.5e-14 83.6 105 41.0
Mapoly0432s0001 Marchantia polymorpha HOM05D019566 ORTHO05D017343 1.3e-08 65.5 43 65.1


User provided reference genes

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