Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_003768 Vanilla planifolia HOM05D002683 ORTHO05D007541 3.9e-125 451.4 224 100.0
HPP92_003748 Vanilla planifolia HOM05D002683 ORTHO05D007541 6.0e-57 224.9 137 84.7
Aa31LG1G5850 Aethionema arabicum HOM05D002683 ORTHO05D007541 2.4e-53 213.0 165 60.0
PSO170G6550 Papaver somniferum HOM05D002683 ORTHO05D007541 4.0e-53 212.2 178 60.7
GSVIVG01031261001 Vitis vinifera HOM05D002683 ORTHO05D007541 8.9e-53 211.1 181 58.6
Cc02_g35250 Coffea canephora HOM05D002683 ORTHO05D007541 4.4e-52 208.8 184 57.6
Nn4g25521 Nelumbo nucifera HOM05D002683 ORTHO05D007541 1.3e-51 207.2 165 60.0
TAR636G0049 Trochodendron aralioides HOM05D002683 ORTHO05D007541 1.3e-51 207.2 165 60.6
Os12g0563400 Oryza sativa ssp. japonica HOM05D002683 ORTHO05D007541 1.7e-51 206.8 166 59.6
Sabra05G0019700 Salix brachista HOM05D002683 ORTHO05D007541 1.7e-51 206.8 162 61.1
TWI12G0569 Tripterygium wilfordii HOM05D002683 ORTHO05D007541 1.7e-51 206.8 176 60.2
MBI18_g27380_MAGBIO Magnolia biondii HOM05D002683 ORTHO05D007541 2.2e-51 206.5 165 59.4
BcaB03g13281 Brassica carinata HOM05D002683 ORTHO05D007541 8.4e-51 204.5 194 52.1
Thhalv10007152m.g Eutrema salsugineum HOM05D002683 ORTHO05D007541 1.1e-50 204.1 199 53.3
PSO357G0623 Papaver somniferum HOM05D002683 ORTHO05D007541 1.1e-50 204.1 178 58.4
Rhsim11G0097600 Rhododendron simsii HOM05D002683 ORTHO05D007541 1.4e-50 203.8 165 58.2
Hma1.2p1_0008F-1.1_g005450 Hydrangea macrophylla HOM05D002683 ORTHO05D007541 2.4e-50 203.0 187 55.6
CSS0018487 Camellia sinensis var. sinensis HOM05D002683 ORTHO05D007541 3.2e-50 202.6 165 57.6
Thecc.05G325100 Theobroma cacao HOM05D002683 ORTHO05D007541 3.2e-50 202.6 181 55.8
Duzib177G0986 Durio zibethinus HOM05D002683 ORTHO05D007541 4.2e-50 202.2 165 58.8
Sabra05G0008400 Salix brachista HOM05D002683 ORTHO05D007541 4.2e-50 202.2 178 56.2
Aqoxy5G02708 Aquilegia oxysepala HOM05D002683 ORTHO05D007541 5.4e-50 201.8 162 62.3
Nitab4.5_0001338g0020 Nicotiana tabacum HOM05D002683 ORTHO05D007541 5.4e-50 201.8 181 54.7
SalBow3G0235 Salvia bowleyana HOM05D002683 ORTHO05D007541 5.4e-50 201.8 178 56.2
SGA_v2.0_scaffold37G14589 Striga asiatica HOM05D002683 ORTHO05D007541 5.4e-50 201.8 167 60.5
BcaB07g34132 Brassica carinata HOM05D002683 ORTHO05D007541 7.1e-50 201.4 194 52.6
BcaC05g24784 Brassica carinata HOM05D002683 ORTHO05D007541 7.1e-50 201.4 194 51.0
C05p07290 Brassica napus HOM05D002683 ORTHO05D007541 7.1e-50 201.4 194 51.0
BolC5t29487H Brassica oleracea HOM05D002683 ORTHO05D007541 7.1e-50 201.4 194 51.0
CiPaw.08G154500 Carya illinoinensis HOM05D002683 ORTHO05D007541 9.3e-50 201.1 194 53.1
AL1G19770 Arabidopsis lyrata HOM05D002683 ORTHO05D007541 1.6e-49 200.3 194 52.1
Cpa.g.sc48.178 Carica papaya HOM05D002683 ORTHO05D007541 1.6e-49 200.3 161 60.2
Nitab4.5_0003838g0060 Nicotiana tabacum HOM05D002683 ORTHO05D007541 1.6e-49 200.3 181 54.1
THA.LOC104823718 Tarenaya hassleriana HOM05D002683 ORTHO05D007541 1.6e-49 200.3 161 59.0
Zm00001eb028560 Zea mays HOM05D002683 ORTHO05D007541 1.6e-49 200.3 166 58.4
A06p06020 Brassica napus HOM05D002683 ORTHO05D007541 2.1e-49 199.9 194 51.5
Migut.N00946 Erythranthe guttata HOM05D002683 ORTHO05D007541 2.1e-49 199.9 178 56.7
Potri.005G011300 Populus trichocarpa HOM05D002683 ORTHO05D007541 2.1e-49 199.9 178 56.2
Actinidia16873 Actinidia chinensis HOM05D002683 ORTHO05D007541 2.7e-49 199.5 165 57.6
Prupe.6G310600 Prunus persica HOM05D002683 ORTHO05D007541 2.7e-49 199.5 161 59.6
AT1G09280 Arabidopsis thaliana HOM05D002683 ORTHO05D007541 3.5e-49 199.1 194 52.1
COL.COLO4_05532 Corchorus olitorius HOM05D002683 ORTHO05D007541 3.5e-49 199.1 162 56.2
Gohir.A13G112800 Gossypium hirsutum HOM05D002683 ORTHO05D007541 3.5e-49 199.1 165 58.2
BraA06t23813Z Brassica rapa HOM05D002683 ORTHO05D007541 4.6e-49 198.7 194 51.0
Gohir.D13G115800 Gossypium hirsutum HOM05D002683 ORTHO05D007541 4.6e-49 198.7 165 58.8
Carub.0001s0862 Capsella rubella HOM05D002683 ORTHO05D007541 6.0e-49 198.4 194 51.0
Cfa006719 Carpinus fangiana HOM05D002683 ORTHO05D007541 6.0e-49 198.4 190 54.2
MD04G1192000 Malus domestica HOM05D002683 ORTHO05D007541 6.0e-49 198.4 161 59.6
Peaxi162Scf00357g00734 Petunia axillaris HOM05D002683 ORTHO05D007541 7.8e-49 198.0 181 54.7
RcHm_v2.0_Chr3g0457491 Rosa chinensis HOM05D002683 ORTHO05D007541 7.8e-49 198.0 181 54.7
Eucgr.H03304 Eucalyptus grandis HOM05D002683 ORTHO05D007541 1.0e-48 197.6 161 58.4
Sp1g07890 Schrenkiella parvula HOM05D002683 ORTHO05D007541 1.0e-48 197.6 194 51.0
CAN.G1076.35 Capsicum annuum HOM05D002683 ORTHO05D007541 1.7e-48 196.8 165 56.4
ECA236G2288 Erigeron canadensis HOM05D002683 ORTHO05D007541 1.7e-48 196.8 161 58.4
Gorai.013G130300 Gossypium raimondii HOM05D002683 ORTHO05D007541 3.0e-48 196.1 169 58.0
Manes.08G110000 Manihot esculenta HOM05D002683 ORTHO05D007541 3.0e-48 196.1 178 54.5
Oeu000064.1 Olea europaea HOM05D002683 ORTHO05D007541 5.1e-48 195.3 165 55.8
MELO3C026102.2 Cucumis melo HOM05D002683 ORTHO05D007541 6.6e-48 194.9 165 56.4
Dinv30907 Davidia involucrata HOM05D000768 ORTHO05D007541 1.5e-47 193.7 165 58.2
FAN14G5638 Fragaria x ananassa HOM05D002683 ORTHO05D007541 1.9e-47 193.4 161 57.8
ClCG01G011120 Citrullus lanatus HOM05D002683 ORTHO05D007541 2.5e-47 193.0 165 55.8
PGR031G0028 Punica granatum HOM05D002683 ORTHO05D007541 2.5e-47 193.0 165 57.0
CsaV3_1G015660 Cucumis sativus L. HOM05D002683 ORTHO05D007541 3.3e-47 192.6 165 56.4
vmacro01579 Vaccinium macrocarpon HOM05D002683 ORTHO05D007541 3.3e-47 192.6 165 55.8
FAN09G3521 Fragaria x ananassa HOM05D002683 ORTHO05D007541 5.6e-47 191.8 161 55.9
DCAR_025291 Daucus carota HOM05D002683 ORTHO05D007541 7.3e-47 191.4 178 55.1
Ciclev10000632m.g Citrus clementina HOM05D002683 ORTHO05D007541 9.6e-47 191.0 161 57.1
Lju926A2G19 Lonicera japonica HOM05D002683 ORTHO05D007541 9.6e-47 191.0 163 58.9
arahy.Tifrunner.gnm1.ann1.87Y8BK Arachis hypogaea HOM05D002683 ORTHO05D007541 1.3e-46 190.7 166 56.6
arahy.Tifrunner.gnm1.ann1.K1W924 Arachis hypogaea HOM05D002683 ORTHO05D007541 1.3e-46 190.7 166 56.6
Haze_04041 Corylus avellana HOM05D002683 ORTHO05D007541 1.6e-46 190.3 199 51.3
Atru.BG.137.p Acer truncatum HOM05D002683 ORTHO05D007541 2.1e-46 189.9 184 53.8
Sopen01g044230 Solanum pennellii HOM05D002683 ORTHO05D007541 2.8e-46 189.5 163 57.1
Phvul.007G202600 Phaseolus vulgaris HOM05D002683 ORTHO05D007541 3.6e-46 189.1 166 54.2
Psat6g153160 Pisum sativum HOM05D002683 ORTHO05D007541 3.6e-46 189.1 194 51.5
CANSAT54G0992 Cannabis sativa HOM05D002683 ORTHO05D007541 4.8e-46 188.7 163 55.8
TPR.G2627 Trifolium pratense HOM05D002683 ORTHO05D007541 6.2e-46 188.3 195 51.3
Medtr1g084180 Medicago truncatula HOM05D002683 ORTHO05D007541 8.1e-46 188.0 194 51.5
Lj5g0006657 Lotus japonicus HOM05D002683 ORTHO05D007541 1.1e-45 187.6 166 54.8
Solyc01g100730.3 Solanum lycopersicum HOM05D002683 ORTHO05D007541 1.1e-45 187.6 163 56.4
Glyma.20G095800 Glycine max HOM05D002683 ORTHO05D007541 1.8e-45 186.8 166 54.8
Hund07305 Selenicereus undatus HOM05D002683 ORTHO05D007541 2.4e-45 186.4 167 55.7
ATR0693G071 Amborella trichopoda HOM05D002683 ORTHO05D007541 5.3e-45 185.3 197 50.8
Sc06g0005730 Simmondsia chinensis HOM05D002683 ORTHO05D007541 9.0e-45 184.5 165 55.2
Ca_10182_v3 Cicer arietinum L. HOM05D002683 ORTHO05D007541 1.2e-44 184.1 194 50.5
Lalb_Chr21g0310191 Lupinus albus HOM05D002683 ORTHO05D007541 1.2e-44 184.1 167 54.5
FAN02G4083 Fragaria x ananassa HOM05D002683 ORTHO05D007541 1.5e-44 183.7 202 48.5
PGSC0003DMG400002793 Solanum tuberosum HOM05D002683 ORTHO05D007541 3.4e-44 182.6 163 54.6
VMungo0720G0539 Vigna mungo HOM05D002683 ORTHO05D007541 3.4e-44 182.6 166 53.6
FAN05G3006 Fragaria x ananassa HOM05D002683 ORTHO05D007541 1.7e-43 180.3 202 48.0
CDE02G3281 Ceratophyllum demersum HOM05D002683 ORTHO05D007541 8.4e-43 177.9 165 50.9
Mapoly0166s0012 Marchantia polymorpha HOM05D002683 ORTHO05D007541 8.4e-43 177.9 168 52.4
Sed0027160 Sechium edule HOM05D002683 ORTHO05D007541 1.9e-42 176.8 166 52.4
EL10Ac4g09492 Beta vulgaris HOM05D002683 ORTHO05D007541 9.3e-42 174.5 167 53.3
AUR62000421 Chenopodium quinoa HOM05D002683 ORTHO05D007541 1.2e-41 174.1 167 52.7
Glyma.10G146100 Glycine max HOM05D002683 ORTHO05D007541 1.3e-40 170.6 173 49.7
AUR62006767 Chenopodium quinoa HOM05D002683 ORTHO05D007541 1.7e-40 170.2 167 52.1
HanXRQChr11g0338181 Helianthus annuus HOM05D002683 ORTHO05D007541 3.9e-40 169.1 142 59.9
Ah.04g158520 Amaranthus hybridus HOM05D002683 ORTHO05D007541 6.6e-40 168.3 167 51.5
Lsat_1_v5_gn_7_79981 Lactuca sativa HOM05D002683 ORTHO05D007541 7.4e-39 164.9 182 50.0
SEGI_16486 Sequoiadendron giganteum HOM05D002683 ORTHO05D007541 2.1e-38 163.3 190 45.8
AagrBONN_evm.TU.Sc2ySwM_344.4363 Anthoceros agrestis HOM05D002683 ORTHO05D007541 1.4e-37 160.6 167 49.1
SMO147G0335 Selaginella moellendorffii HOM05D002683 ORTHO05D007541 4.0e-37 159.1 174 49.4
QL03p016208 Quercus lobata HOM05D002683 ORTHO05D007541 2.0e-36 156.8 304 34.5
PSO063G0436 Papaver somniferum HOM05D002683 ORTHO05D007541 4.9e-27 125.6 110 59.1
SalBow3G0722 Salvia bowleyana HOM05D000277 ORTHO05D000214 2.5e-26 123.2 110 55.5
unitig_749.g13411 Utricularia gibba HOM05D002683 ORTHO05D007541 7.1e-26 121.7 99 59.6
Atru.chr2.247 Acer truncatum HOM05D002683 ORTHO05D007541 9.3e-26 121.3 173 43.4
Pp3c5_28120 Physcomitrium patens HOM05D002683 ORTHO05D007541 1.2e-25 120.9 172 42.4
PSO541G1790 Papaver somniferum HOM05D002683 ORTHO05D007541 3.5e-25 119.4 114 56.1
FvH4_6g07770 Fragaria vesca HOM05D002683 ORTHO05D007541 1.3e-24 117.5 103 55.3
Atru.chr2.243 Acer truncatum HOM05D002683 ORTHO05D007541 2.2e-19 100.1 86 60.5
PRCOL_00000004 Prasinoderma coloniale HOM05D002683 ORTHO05D007541 2.2e-14 83.6 197 32.0
SMO025G0004 Selaginella moellendorffii HOM05D002683 ORTHO05D007541 4.8e-14 82.4 115 43.5
Cre17.g719522 Chlamydomonas reinhardtii HOM05D002683 ORTHO05D007541 1.2e-12 77.8 258 26.0
SMO273G0037 Selaginella moellendorffii HOM05D002683 ORTHO05D007541 2.2e-11 73.6 116 37.9
PRCOL_00003794 Prasinoderma coloniale HOM05D002683 ORTHO05D007541 1.9e-10 70.5 169 31.4
CBR_g985 Chara braunii HOM05D002683 ORTHO05D007541 1.6e-09 67.4 61 50.8
SMO367G0869 Selaginella moellendorffii HOM05D006907 ORTHO05D008598 3.3e-07 59.7 154 25.3
TPR.G19824 Trifolium pratense HOM05D002683 ORTHO05D410724 3.3e-07 59.7 53 56.6


User provided reference genes

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