Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_003614 Vanilla planifolia HOM05D006009 ORTHO05D007389 0.0e+00 1204.5 708 100.0
MBI03_g05191_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 3.3e-202 709.1 724 59.1
Atru.chr6.240 Acer truncatum HOM05D006009 ORTHO05D007389 1.0e-187 661.0 730 52.5
TAR628G0644 Trochodendron aralioides HOM05D006009 ORTHO05D007389 1.3e-187 660.6 718 54.6
PSO017G1873 Papaver somniferum HOM05D006009 ORTHO05D007389 5.5e-181 638.6 716 51.8
Cfa004445 Carpinus fangiana HOM05D006009 ORTHO05D007389 7.2e-181 638.3 723 51.7
Thecc.06G017900 Theobroma cacao HOM05D006009 ORTHO05D007389 2.7e-180 636.3 727 50.8
Dinv29632 Davidia involucrata HOM05D006009 ORTHO05D007389 3.3e-178 629.4 720 52.2
CSS0016468 Camellia sinensis var. sinensis HOM05D006009 ORTHO05D007389 5.7e-178 628.6 720 51.8
CiPaw.05G001600 Carya illinoinensis HOM05D006009 ORTHO05D007389 5.7e-178 628.6 725 52.0
QL02p103325 Quercus lobata HOM05D006009 ORTHO05D007389 1.7e-177 627.1 725 50.3
Duzib160G0440 Durio zibethinus HOM05D006009 ORTHO05D007389 4.8e-177 625.5 727 50.2
RcHm_v2.0_Chr7g0219751 Rosa chinensis HOM05D006009 ORTHO05D007389 4.8e-177 625.5 725 51.3
Ciclev10000419m.g Citrus clementina HOM05D006009 ORTHO05D007389 8.2e-177 624.8 727 55.0
Nn5g27199 Nelumbo nucifera HOM05D006009 ORTHO05D007389 2.4e-176 623.2 719 56.2
Sc03g0005770 Simmondsia chinensis HOM05D006009 ORTHO05D007389 6.9e-176 621.7 721 52.8
Manes.10G106700 Manihot esculenta HOM05D006009 ORTHO05D007389 2.0e-175 620.2 725 51.4
HanXRQChr10g0301411 Helianthus annuus HOM05D006009 ORTHO05D007389 2.6e-175 619.8 720 53.3
Rhsim11G0117900 Rhododendron simsii HOM05D006009 ORTHO05D007389 2.9e-174 616.3 748 50.5
Aqoxy6G00035 Aquilegia oxysepala HOM05D006009 ORTHO05D007389 5.0e-174 615.5 678 52.9
Actinidia00150 Actinidia chinensis HOM05D006009 ORTHO05D007389 1.9e-173 613.6 720 51.7
Os01g0877300 Oryza sativa ssp. japonica HOM05D006009 ORTHO05D007389 7.2e-173 611.7 728 52.1
FvH4_5g27851 Fragaria vesca HOM05D006009 ORTHO05D007389 1.4e-171 607.4 725 50.2
Haze_09985 Corylus avellana HOM05D006009 ORTHO05D007389 2.3e-171 606.7 810 46.2
arahy.Tifrunner.gnm1.ann1.AUD1A6 Arachis hypogaea HOM05D006009 ORTHO05D007389 3.0e-171 606.3 674 51.9
Cc02_g23590 Coffea canephora HOM05D006009 ORTHO05D007389 3.0e-171 606.3 731 51.8
arahy.Tifrunner.gnm1.ann1.WHZ4K1 Arachis hypogaea HOM05D006009 ORTHO05D007389 6.7e-171 605.1 673 52.0
MD08G1248100 Malus domestica HOM05D006009 ORTHO05D007389 8.2e-169 598.2 674 52.2
Sabra03G0000300 Salix brachista HOM05D006009 ORTHO05D007389 8.2e-169 598.2 726 49.7
Gohir.D06G150100 Gossypium hirsutum HOM05D006009 ORTHO05D007389 1.4e-168 597.4 727 49.2
THA.LOC104806651 Tarenaya hassleriana HOM05D006009 ORTHO05D007389 1.8e-168 597.0 726 49.4
Potri.003G000900 Populus trichocarpa HOM05D006009 ORTHO05D007389 5.3e-168 595.5 726 48.9
CARHR258850 Cardamine hirsuta HOM05D006009 ORTHO05D007389 9.1e-168 594.7 724 49.9
Ca_13530_v3 Cicer arietinum L. HOM05D006009 ORTHO05D007389 1.2e-167 594.3 721 49.8
CsaV3_5G037180 Cucumis sativus L. HOM05D006009 ORTHO05D007389 2.6e-167 593.2 730 49.5
Lsat_1_v5_gn_5_104280 Lactuca sativa HOM05D006009 ORTHO05D007389 2.6e-167 593.2 734 49.2
COL.COLO4_31132 Corchorus olitorius HOM05D006009 ORTHO05D007389 3.5e-167 592.8 697 50.2
Solyc01g103040.4 Solanum lycopersicum HOM05D006009 ORTHO05D007389 5.9e-167 592.0 725 49.4
BcaB08g35360 Brassica carinata HOM05D006009 ORTHO05D007389 1.3e-166 590.9 720 49.3
Prupe.1G585300 Prunus persica HOM05D006009 ORTHO05D007389 1.7e-166 590.5 674 51.6
PGR142G3497 Punica granatum HOM05D006009 ORTHO05D007389 1.7e-166 590.5 724 48.3
AL8G23820 Arabidopsis lyrata HOM05D006009 ORTHO05D007389 2.9e-166 589.7 730 49.2
Gorai.010G175200 Gossypium raimondii HOM05D006009 ORTHO05D007389 1.9e-165 587.0 728 48.9
Thhalv10012797m.g Eutrema salsugineum HOM05D006009 ORTHO05D007389 3.2e-165 586.3 725 48.7
Sp6g11340 Schrenkiella parvula HOM05D006009 ORTHO05D007389 1.2e-164 584.3 725 48.4
MELO3C022930.2 Cucumis melo HOM05D006009 ORTHO05D007389 2.1e-164 583.6 730 48.9
AT5G49880 Arabidopsis thaliana HOM05D006009 ORTHO05D007389 2.7e-164 583.2 727 48.3
Eucgr.I02796 Eucalyptus grandis HOM05D006009 ORTHO05D007389 6.1e-164 582.0 727 50.1
ECA234G2369 Erigeron canadensis HOM05D006009 ORTHO05D007389 8.0e-164 581.6 708 50.3
TPR.G5949 Trifolium pratense HOM05D006009 ORTHO05D007389 1.0e-163 581.3 722 50.0
BraSC37t46134Z Brassica rapa HOM05D006009 ORTHO05D007389 1.1e-162 577.8 723 48.8
A10p08680 Brassica napus HOM05D006009 ORTHO05D007389 2.0e-162 577.0 723 49.5
Nitab4.5_0002261g0040 Nicotiana tabacum HOM05D006009 ORTHO05D007389 2.0e-162 577.0 729 48.3
Lj4g0014586 Lotus japonicus HOM05D006009 ORTHO05D007389 4.4e-162 575.9 726 49.0
Sopen01g045450 Solanum pennellii HOM05D006009 ORTHO05D007389 4.4e-162 575.9 725 48.6
MD15G1442900 Malus domestica HOM05D006009 ORTHO05D007389 1.3e-161 574.3 676 50.4
TWI59G1011 Tripterygium wilfordii HOM05D006009 ORTHO05D007389 1.3e-161 574.3 677 49.9
Peaxi162Scf00011g01924 Petunia axillaris HOM05D006009 ORTHO05D007389 1.7e-161 573.9 729 49.0
BcaC04g20834 Brassica carinata HOM05D006009 ORTHO05D007389 3.7e-161 572.8 721 49.7
Psat4g001000 Pisum sativum HOM05D006009 ORTHO05D007389 3.7e-161 572.8 724 47.1
Carub.0008s0974 Capsella rubella HOM05D006009 ORTHO05D007389 6.3e-161 572.0 726 47.9
SGA_v2.0_scaffold131G34411 Striga asiatica HOM05D006009 ORTHO05D007389 6.3e-161 572.0 734 47.7
ClCG11G000290 Citrullus lanatus HOM05D006009 ORTHO05D007389 2.4e-160 570.1 730 48.2
Medtr4g134640 Medicago truncatula HOM05D006009 ORTHO05D007389 2.4e-160 570.1 713 47.7
Nitab4.5_0005110g0010 Nicotiana tabacum HOM05D006009 ORTHO05D007389 2.4e-160 570.1 747 47.4
Glyma.17G001700 Glycine max HOM05D006009 ORTHO05D007389 9.1e-160 568.2 717 48.7
MSTRG.16468 Avicennia marina HOM05D006009 ORTHO05D007389 2.7e-159 566.6 696 49.3
Ah.03g136790 Amaranthus hybridus HOM05D006009 ORTHO05D007389 3.5e-159 566.2 722 48.6
PSO170G2218 Papaver somniferum HOM05D006009 ORTHO05D007389 5.9e-159 565.5 688 49.0
C09p38660 Brassica napus HOM05D006009 ORTHO05D007389 1.7e-158 563.9 723 49.5
BolC9t56722H Brassica oleracea HOM05D006009 ORTHO05D007389 1.7e-158 563.9 723 49.5
ATR1089G153 Amborella trichopoda HOM05D006009 ORTHO05D007389 3.8e-158 562.8 716 51.3
Phvul.003G076200 Phaseolus vulgaris HOM05D006009 ORTHO05D007389 3.8e-158 562.8 692 49.9
Hma1.2p1_0052F.1_g030000 Hydrangea macrophylla HOM05D006009 ORTHO05D007389 3.2e-157 559.7 701 48.5
Migut.B00722 Erythranthe guttata HOM05D006009 ORTHO05D007389 1.2e-156 557.8 676 49.9
Lalb_Chr12g0195841 Lupinus albus HOM05D006009 ORTHO05D007389 2.7e-156 556.6 715 47.7
Lj5C283T7 Lonicera japonica HOM05D006009 ORTHO05D007389 5.4e-152 542.3 718 47.8
AUR62042641 Chenopodium quinoa HOM05D006009 ORTHO05D007389 1.0e-150 538.1 744 46.4
vmacro01680 Vaccinium macrocarpon HOM05D006009 ORTHO05D007389 7.2e-149 531.9 809 44.4
Aa31sc62G20 Aethionema arabicum HOM05D006009 ORTHO05D007389 1.4e-147 527.7 722 47.6
Potri.004G228900 Populus trichocarpa HOM05D006009 ORTHO05D007389 3.7e-145 519.6 728 45.2
Glyma.07G272700 Glycine max HOM05D006009 ORTHO05D007389 1.1e-144 518.1 685 46.9
FAN08G0569 Fragaria x ananassa HOM05D006009 ORTHO05D007389 2.7e-143 513.5 796 43.3
DCAR_001725 Daucus carota HOM05D006009 ORTHO05D007389 7.7e-143 511.9 690 45.4
unitig_8.g4550 Utricularia gibba HOM05D006009 ORTHO05D007389 6.6e-142 508.8 675 46.2
AUR62032470 Chenopodium quinoa HOM05D006009 ORTHO05D007389 1.0e-139 501.5 724 45.3
EL10Ac6g13997 Beta vulgaris HOM05D006009 ORTHO05D007389 1.2e-135 488.0 765 42.5
FAN04G2183 Fragaria x ananassa HOM05D006009 ORTHO05D007389 8.6e-134 481.9 655 46.9
CDE05G2940 Ceratophyllum demersum HOM05D006009 ORTHO05D007389 1.6e-132 477.6 576 50.3
Gohir.A06G144400 Gossypium hirsutum HOM05D006009 ORTHO05D007389 6.8e-131 472.2 727 42.9
Oeu043610.2 Olea europaea HOM05D006009 ORTHO05D007389 1.5e-117 427.9 675 43.4
CANSAT01G0444 Cannabis sativa HOM05D006009 ORTHO05D007389 9.9e-106 388.7 601 44.1
Cpa.g.sc173.18 Carica papaya HOM05D006009 ORTHO05D007389 1.5e-98 364.8 374 55.6
CAN.G855.52 Capsicum annuum HOM05D006009 ORTHO05D007389 6.7e-94 349.4 363 54.8
Manes.10G107000 Manihot esculenta HOM05D006009 ORTHO05D007389 4.6e-87 326.6 426 47.4
Zm00001eb145920 Zea mays HOM05D006009 ORTHO05D007389 1.8e-86 324.7 444 46.4
GSVIVG01023147001 Vitis vinifera HOM05D006009 ORTHO05D007389 1.1e-83 315.5 301 58.1
GSVIVG01023148001 Vitis vinifera HOM05D006009 ORTHO05D007389 2.0e-82 311.2 423 46.1
Sed0013076 Sechium edule HOM05D006009 ORTHO05D007389 7.6e-82 309.3 583 40.1
Oeu028479.1 Olea europaea HOM05D006009 ORTHO05D007389 6.0e-79 299.7 212 73.1
FAN18G4220 Fragaria x ananassa HOM05D006009 ORTHO05D007389 2.3e-78 297.7 496 40.7
AagrBONN_evm.TU.Sc2ySwM_228.1218 Anthoceros agrestis HOM05D006009 ORTHO05D007389 1.8e-75 288.1 673 33.1
Pp3c17_20400 Physcomitrium patens HOM05D006009 ORTHO05D007389 5.3e-75 286.6 689 31.3
Mapoly0034s0031 Marchantia polymorpha HOM05D006009 ORTHO05D007389 2.2e-68 264.6 666 29.4
ECA234G2367 Erigeron canadensis HOM05D000005 ORTHO05D000012 9.4e-64 249.2 344 50.9
CAN.G855.51 Capsicum annuum HOM05D006009 ORTHO05D007389 4.4e-61 240.4 371 41.5
CBR_g38734 Chara braunii HOM05D006009 ORTHO05D007389 1.2e-58 232.3 732 27.7
SMO343G0014 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 2.6e-58 231.1 699 28.5
Cpa.g.sc173.20 Carica papaya HOM05D006009 ORTHO05D007389 6.7e-46 189.9 374 36.6
Oeu028480.1 Olea europaea HOM05D006009 ORTHO05D007389 2.0e-45 188.3 272 41.5
Sabra01G0173900 Salix brachista HOM05D006009 ORTHO05D007389 3.5e-42 177.6 463 33.0
SHI05061 Sapria himalayana HOM05D000030 ORTHO05D000009 4.1e-35 154.1 448 32.4
SEGI_19376 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 3.5e-26 124.4 109 61.5
SEGI_34522 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 4.5e-26 124.0 84 66.7
MBI18_g16980_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 1.7e-17 95.5 55 87.3
SEGI_26370 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 2.5e-16 91.7 124 40.3
MBI18_g20174_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 1.1e-14 86.3 68 61.8
PRCOL_00003389 Prasinoderma coloniale HOM05D006009 ORTHO05D007389 1.1e-14 86.3 502 21.5
SMO343G0089 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 1.1e-14 86.3 172 35.5
MCO13G251 Micromonas commoda HOM05D006009 ORTHO05D007389 8.9e-14 83.2 117 40.2
Hund15371 Selenicereus undatus HOM05D006009 ORTHO05D007389 3.4e-13 81.3 171 37.4
Eucgr.D02407 Eucalyptus grandis HOM05D006009 ORTHO05D007389 5.8e-13 80.5 49 79.6
SEGI_01187 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 1.3e-12 79.3 149 34.9
Zm00001eb351220 Zea mays HOM05D006009 ORTHO05D007389 4.9e-12 77.4 57 64.9
Psat6g226760 Pisum sativum HOM05D003335 ORTHO05D003853 3.5e-10 71.2 92 41.3
Glyma.14G105500 Glycine max HOM05D006009 ORTHO05D007389 2.1e-07 62.0 72 48.6
Oeu028483.1 Olea europaea HOM05D006009 ORTHO05D007389 2.1e-07 62.0 93 45.2
RhsimUnG0219700 Rhododendron simsii HOM05D006009 ORTHO05D007389 4.0e-06 57.8 41 68.3


User provided reference genes

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