Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_003528 Vanilla planifolia HOM05D006286 ORTHO05D007741 1.3e-134 483.0 239 100.0
QL09p015278 Quercus lobata HOM05D006286 ORTHO05D007741 2.3e-83 312.8 232 66.8
arahy.Tifrunner.gnm1.ann1.MQ4KH5 Arachis hypogaea HOM05D006286 ORTHO05D007741 8.9e-83 310.8 236 64.4
TWI39G0272 Tripterygium wilfordii HOM05D006286 ORTHO05D007741 8.9e-83 310.8 239 65.3
Lj5g0022226 Lotus japonicus HOM05D006286 ORTHO05D007741 4.4e-82 308.5 237 66.7
Cfa008258 Carpinus fangiana HOM05D006286 ORTHO05D007741 2.2e-81 306.2 227 68.3
TAR629G0337 Trochodendron aralioides HOM05D006286 ORTHO05D007741 2.2e-81 306.2 227 66.1
FAN10G3629 Fragaria x ananassa HOM05D006286 ORTHO05D007741 3.7e-81 305.4 238 62.2
FAN03G0223 Fragaria x ananassa HOM05D006286 ORTHO05D007741 8.3e-81 304.3 234 63.7
Haze_13788 Corylus avellana HOM05D006286 ORTHO05D007741 1.4e-80 303.5 240 64.2
CiPaw.03G100700 Carya illinoinensis HOM05D006286 ORTHO05D007741 3.1e-80 302.4 239 64.0
RcHm_v2.0_Chr1g0376301 Rosa chinensis HOM05D006286 ORTHO05D007741 3.1e-80 302.4 238 61.3
FAN01G0056 Fragaria x ananassa HOM05D006286 ORTHO05D007741 4.1e-80 302.0 230 63.5
FAN03G0937 Fragaria x ananassa HOM05D006286 ORTHO05D007741 4.1e-80 302.0 234 63.2
HanXRQChr14g0461801 Helianthus annuus HOM05D006286 ORTHO05D007741 4.1e-80 302.0 232 67.7
Manes.14G030600 Manihot esculenta HOM05D006286 ORTHO05D007741 4.1e-80 302.0 242 63.2
FAN06G1618 Fragaria x ananassa HOM05D006286 ORTHO05D007741 5.4e-80 301.6 240 61.2
Nn1g01303 Nelumbo nucifera HOM05D006286 ORTHO05D007741 5.4e-80 301.6 227 64.8
ClCG05G007720 Citrullus lanatus HOM05D006286 ORTHO05D007741 7.0e-80 301.2 238 64.7
Ciclev10005723m.g Citrus clementina HOM05D006286 ORTHO05D007741 7.0e-80 301.2 239 62.8
Glyma.10G240400 Glycine max HOM05D006286 ORTHO05D007741 1.6e-79 300.1 239 63.2
FvH4_7g28750 Fragaria vesca HOM05D006286 ORTHO05D007741 2.0e-79 299.7 238 60.9
Lsat_1_v5_gn_2_130220 Lactuca sativa HOM05D006286 ORTHO05D007741 2.7e-79 299.3 242 64.5
FAN06G4550 Fragaria x ananassa HOM05D006286 ORTHO05D007741 3.5e-79 298.9 230 62.6
Eucgr.A02845 Eucalyptus grandis HOM05D006286 ORTHO05D007741 4.5e-79 298.5 243 61.7
MELO3C006861.2 Cucumis melo HOM05D006286 ORTHO05D007741 5.9e-79 298.1 240 62.1
DCAR_018141 Daucus carota HOM05D006286 ORTHO05D007741 5.9e-79 298.1 232 62.9
MD01G1193900 Malus domestica HOM05D006286 ORTHO05D007741 5.9e-79 298.1 234 62.0
Prupe.2G287700 Prunus persica HOM05D006286 ORTHO05D007741 7.8e-79 297.7 233 61.8
PSO782G2014 Papaver somniferum HOM05D006286 ORTHO05D007741 1.3e-78 297.0 231 65.4
CSS0046699 Camellia sinensis var. sinensis HOM05D006286 ORTHO05D007741 1.7e-78 296.6 235 63.8
CsaV3_3G016660 Cucumis sativus L. HOM05D006286 ORTHO05D007741 1.7e-78 296.6 243 61.3
SGA_v2.0_scaffold113G31783 Striga asiatica HOM05D006286 ORTHO05D007741 1.7e-78 296.6 236 61.9
Aqoxy7G00487 Aquilegia oxysepala HOM05D006286 ORTHO05D007741 2.9e-78 295.8 236 64.0
GSVIVG01018444001 Vitis vinifera HOM05D006286 ORTHO05D007741 2.9e-78 295.8 239 61.5
Rhsim03G0175100 Rhododendron simsii HOM05D006286 ORTHO05D007741 3.8e-78 295.4 237 62.0
Thecc.03G167300 Theobroma cacao HOM05D006286 ORTHO05D007741 3.8e-78 295.4 243 60.9
Potri.015G135300 Populus trichocarpa HOM05D006286 ORTHO05D007741 5.0e-78 295.0 238 60.1
Phvul.007G065700 Phaseolus vulgaris HOM05D006286 ORTHO05D007741 6.6e-78 294.7 240 62.5
Sabra15G0147300 Salix brachista HOM05D006286 ORTHO05D007741 1.1e-77 293.9 238 60.5
Sc13g0008250 Simmondsia chinensis HOM05D006286 ORTHO05D007741 1.1e-77 293.9 229 65.1
PSO478G4977 Papaver somniferum HOM05D006286 ORTHO05D007741 1.9e-77 293.1 239 61.9
Os03g0119000 Oryza sativa ssp. japonica HOM05D006286 ORTHO05D007741 2.5e-77 292.7 217 67.3
Cpa.g.sc4.205 Carica papaya HOM05D006286 ORTHO05D007741 3.3e-77 292.4 230 63.9
Gohir.A09G179500 Gossypium hirsutum HOM05D006286 ORTHO05D007741 3.3e-77 292.4 217 65.9
Sed0023063 Sechium edule HOM05D006286 ORTHO05D007741 3.3e-77 292.4 232 63.4
ECA238G1566 Erigeron canadensis HOM05D006286 ORTHO05D007741 5.6e-77 291.6 232 63.8
PSO782G5477 Papaver somniferum HOM05D006286 ORTHO05D007741 5.6e-77 291.6 231 64.5
Atru.chr1.554 Acer truncatum HOM05D006286 ORTHO05D007741 2.1e-76 289.7 241 60.6
CANSAT25G1059 Cannabis sativa HOM05D006286 ORTHO05D007741 2.1e-76 289.7 237 61.6
EL10Ac3g05740 Beta vulgaris HOM05D006286 ORTHO05D007741 3.6e-76 288.9 214 66.8
Gorai.006G196900 Gossypium raimondii HOM05D006286 ORTHO05D007741 8.0e-76 287.7 229 63.8
Lalb_Chr06g0160901 Lupinus albus HOM05D006286 ORTHO05D007741 8.0e-76 287.7 220 65.5
AUR62021266 Chenopodium quinoa HOM05D006286 ORTHO05D007741 1.4e-75 287.0 214 66.8
Oeu047963.2 Olea europaea HOM05D006286 ORTHO05D007741 1.8e-75 286.6 239 63.2
Migut.F00396 Erythranthe guttata HOM05D006286 ORTHO05D007741 3.0e-75 285.8 233 61.8
Psat6g201680 Pisum sativum HOM05D006286 ORTHO05D007741 5.2e-75 285.0 233 63.1
Duzib084G1364 Durio zibethinus HOM05D006286 ORTHO05D007741 6.8e-75 284.6 242 59.9
TPR.G17410 Trifolium pratense HOM05D006286 ORTHO05D007741 8.9e-75 284.3 239 61.5
Thhalv10014484m.g Eutrema salsugineum HOM05D006286 ORTHO05D007741 1.2e-74 283.9 224 61.6
Ah.13g067810 Amaranthus hybridus HOM05D006286 ORTHO05D007741 2.0e-74 283.1 219 64.8
Ca_10810_v3 Cicer arietinum L. HOM05D006286 ORTHO05D007741 2.0e-74 283.1 236 61.4
Rhsim09G0195200 Rhododendron simsii HOM05D006286 ORTHO05D007741 2.6e-74 282.7 230 60.9
Gohir.D13G056900 Gossypium hirsutum HOM05D006286 ORTHO05D007741 4.4e-74 282.0 223 61.4
Gorai.013G064300 Gossypium raimondii HOM05D006286 ORTHO05D007741 4.4e-74 282.0 223 61.4
unitig_37.g11947 Utricularia gibba HOM05D006286 ORTHO05D007741 4.4e-74 282.0 227 61.7
Aa31sc908G10 Aethionema arabicum HOM05D006286 ORTHO05D007741 7.5e-74 281.2 229 61.6
ATR0757G128 Amborella trichopoda HOM05D006286 ORTHO05D007741 9.8e-74 280.8 232 60.8
Carub.0008s1192 Capsella rubella HOM05D006286 ORTHO05D007741 1.7e-73 280.0 223 61.9
Nitab4.5_0004911g0020 Nicotiana tabacum HOM05D006286 ORTHO05D007741 1.7e-73 280.0 239 58.6
Cc02_g03560 Coffea canephora HOM05D006286 ORTHO05D007741 3.7e-73 278.9 230 60.0
VMungo0720G2540 Vigna mungo HOM05D006286 ORTHO05D007741 3.7e-73 278.9 227 61.2
Hund04686 Selenicereus undatus HOM05D006286 ORTHO05D007741 6.4e-73 278.1 239 61.1
MSTRG.8433 Avicennia marina HOM05D006286 ORTHO05D007741 1.1e-72 277.3 211 63.5
Dinv28504 Davidia involucrata HOM05D006286 ORTHO05D007741 1.1e-72 277.3 302 50.7
Sopen03g002810 Solanum pennellii HOM05D006286 ORTHO05D007741 1.1e-72 277.3 236 58.5
Peaxi162Scf00192g00519 Petunia axillaris HOM05D006286 ORTHO05D007741 1.4e-72 276.9 231 61.0
vmacro09869 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 1.8e-72 276.6 231 60.2
Actinidia14215 Actinidia chinensis HOM05D006286 ORTHO05D007741 2.4e-72 276.2 244 58.2
Solyc03g006820.3 Solanum lycopersicum HOM05D006286 ORTHO05D007741 2.4e-72 276.2 236 58.1
CAN.G1097.8 Capsicum annuum HOM05D006286 ORTHO05D007741 4.1e-72 275.4 242 58.3
Sp6g14140 Schrenkiella parvula HOM05D006286 ORTHO05D007741 4.1e-72 275.4 223 61.0
PGSC0003DMG400024248 Solanum tuberosum HOM05D006286 ORTHO05D007741 5.4e-72 275.0 240 58.3
Gohir.A13G064700 Gossypium hirsutum HOM05D006286 ORTHO05D007741 7.0e-72 274.6 223 60.5
AT5G51880 Arabidopsis thaliana HOM05D006286 ORTHO05D007741 9.2e-72 274.2 232 59.1
Lj8A31T63 Lonicera japonica HOM05D006286 ORTHO05D007741 3.5e-71 272.3 199 66.3
BcaC04g20627 Brassica carinata HOM05D006286 ORTHO05D007741 6.0e-71 271.6 236 58.9
C09p41380 Brassica napus HOM05D006286 ORTHO05D007741 6.0e-71 271.6 236 58.9
BolC9t57014H Brassica oleracea HOM05D006286 ORTHO05D007741 6.0e-71 271.6 236 58.9
A10p09720 Brassica napus HOM05D006286 ORTHO05D007741 7.8e-71 271.2 239 56.9
BraA10t43052Z Brassica rapa HOM05D006286 ORTHO05D007741 7.8e-71 271.2 239 56.9
Actinidia25052 Actinidia chinensis HOM05D006286 ORTHO05D007741 1.3e-70 270.4 230 58.7
AL8G26180 Arabidopsis lyrata HOM05D006286 ORTHO05D007741 1.7e-70 270.0 225 58.7
BcaB08g35541 Brassica carinata HOM05D006286 ORTHO05D007741 3.9e-70 268.9 226 58.8
arahy.Tifrunner.gnm1.ann1.TWGE9F Arachis hypogaea HOM05D006286 ORTHO05D007741 1.1e-69 267.3 208 62.5
AUR62016058 Chenopodium quinoa HOM05D006286 ORTHO05D007741 3.3e-69 265.8 195 66.2
THA.LOC104825086 Tarenaya hassleriana HOM05D006286 ORTHO05D007741 1.8e-67 260.0 239 56.5
PGR042G3452 Punica granatum HOM05D006286 ORTHO05D007741 4.0e-67 258.8 202 63.9
Nitab4.5_0000832g0010 Nicotiana tabacum HOM05D006286 ORTHO05D007741 4.4e-66 255.4 195 63.1
CDE12G0688 Ceratophyllum demersum HOM05D006286 ORTHO05D007741 4.9e-65 251.9 194 63.4
MBI12_g36686_MAGBIO Magnolia biondii HOM05D006286 ORTHO05D007741 2.7e-63 246.1 191 63.4
CARHR264790 Cardamine hirsuta HOM05D006286 ORTHO05D007741 1.3e-62 243.8 199 60.3
SalBow2G2245 Salvia bowleyana HOM05D006286 ORTHO05D007741 1.3e-62 243.8 238 55.0
Mapoly0028s0137 Marchantia polymorpha HOM05D006286 ORTHO05D007741 8.6e-62 241.1 226 55.8
vmacro06741 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 2.1e-60 236.5 204 57.8
COL.COLO4_14231 Corchorus olitorius HOM05D006286 ORTHO05D007741 8.1e-60 234.6 181 62.4
SMO139G0115 Selaginella moellendorffii HOM05D006286 ORTHO05D007741 9.9e-58 227.6 222 51.4
Pp3c22_4190 Physcomitrium patens HOM05D006286 ORTHO05D007741 1.1e-56 224.2 238 50.8
AagrBONN_evm.TU.Sc2ySwM_368.2699 Anthoceros agrestis HOM05D006286 ORTHO05D007741 3.0e-54 216.1 190 58.9
Glyma.20G154300 Glycine max HOM05D006286 ORTHO05D007741 1.5e-53 213.8 197 55.8
CiPaw.15G075500 Carya illinoinensis HOM05D006286 ORTHO05D007741 1.2e-52 210.7 205 53.7
Zm00001eb001360 Zea mays HOM05D006286 ORTHO05D007741 2.4e-51 206.5 192 56.8
SEGI_34239 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 5.8e-50 201.8 186 53.8
Gohir.D09G174800 Gossypium hirsutum HOM05D006286 ORTHO05D007741 1.2e-47 194.1 142 66.9
Potri.012G133100 Populus trichocarpa HOM05D006286 ORTHO05D007741 1.0e-46 191.0 259 44.8
Actinidia03097 Actinidia chinensis HOM05D006286 ORTHO05D007741 4.4e-42 175.6 128 63.3
Medtr1g101840 Medicago truncatula HOM05D006286 ORTHO05D007741 5.8e-42 175.3 141 66.0
SHI13825 Sapria himalayana HOM05D000350 ORTHO05D000228 1.1e-27 127.9 184 39.7
Cfa025685 Carpinus fangiana HOM05D006286 ORTHO05D007741 7.6e-26 121.7 241 35.3
MCO04G355 Micromonas commoda HOM05D006286 ORTHO05D007741 7.1e-24 115.2 198 37.4
Actinidia13543 Actinidia chinensis HOM05D006286 ORTHO05D007741 4.3e-21 105.9 85 57.6
PRCOL_00006636 Prasinoderma coloniale HOM05D006286 ORTHO05D007741 1.8e-19 100.5 184 38.6
Cre14.g619900 Chlamydomonas reinhardtii HOM05D006286 ORTHO05D007741 4.5e-18 95.9 202 31.2
RcHm_v2.0_Chr1g0376261 Rosa chinensis HOM05D006286 ORTHO05D007741 1.1e-11 74.7 48 66.7
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 2.4e-11 73.6 66 53.0
MCO01G267 Micromonas commoda HOM05D049972 ORTHO05D049270 5.0e-09 65.9 214 25.7
FvH4_2g14060 Fragaria vesca HOM05D006286 ORTHO05D007741 1.9e-08 63.9 59 47.5
SEGI_15131 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 7.9e-07 58.5 34 76.5


User provided reference genes

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