Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_003468 Vanilla planifolia HOM05D001629 ORTHO05D004216 3.5e-109 398.3 201 100.0
HPP92_026873 Vanilla planifolia HOM05D001629 ORTHO05D004216 1.8e-84 316.2 176 93.2
HPP92_003473 Vanilla planifolia HOM05D001629 ORTHO05D004216 1.7e-50 203.4 116 89.7
HPP92_001756 Vanilla planifolia HOM05D001629 ORTHO05D004216 2.6e-43 179.5 153 66.0
HPP92_022226 Vanilla planifolia HOM05D001629 ORTHO05D004216 6.8e-28 128.3 150 50.0
HPP92_007334 Vanilla planifolia HOM05D001629 ORTHO05D004216 5.8e-27 125.2 147 49.0
HPP92_022212 Vanilla planifolia HOM05D001629 ORTHO05D004216 4.9e-26 122.1 175 42.9
Zm00001eb393620 Zea mays HOM05D001629 ORTHO05D004216 7.3e-14 81.6 121 44.6
Prupe.2G249300 Prunus persica HOM05D001629 ORTHO05D004216 2.1e-13 80.1 133 39.8
MD07G1221300 Malus domestica HOM05D001629 ORTHO05D004216 1.4e-12 77.4 135 38.5
CiPaw.01G298000 Carya illinoinensis HOM05D001629 ORTHO05D004216 3.1e-12 76.3 143 37.1
FAN03G2638 Fragaria x ananassa HOM05D001629 ORTHO05D004216 3.1e-12 76.3 139 37.4
Haze_17220 Corylus avellana HOM05D001629 ORTHO05D004216 4.0e-12 75.9 133 39.1
MD01G1152300 Malus domestica HOM05D001629 ORTHO05D004216 4.0e-12 75.9 135 38.5
FvH4_7g24390 Fragaria vesca HOM05D001629 ORTHO05D004216 9.0e-12 74.7 139 37.4
FAN10G0075 Fragaria x ananassa HOM05D005539 ORTHO05D006644 9.0e-12 74.7 130 38.5
Lj6g0004743 Lotus japonicus HOM05D001629 ORTHO05D004216 2.0e-11 73.6 142 38.7
Psat5g127840 Pisum sativum HOM05D001629 ORTHO05D004216 2.0e-11 73.6 141 38.3
QL08p063075 Quercus lobata HOM05D001629 ORTHO05D004216 2.0e-11 73.6 139 36.0
Atru.chr12.25 Acer truncatum HOM05D001629 ORTHO05D004216 3.4e-11 72.8 137 36.5
Medtr3g070400 Medicago truncatula HOM05D001629 ORTHO05D004216 3.4e-11 72.8 142 37.3
Dinv10628 Davidia involucrata HOM05D001629 ORTHO05D004216 5.8e-11 72.0 132 37.9
Dinv34390 Davidia involucrata HOM05D001629 ORTHO05D004216 5.8e-11 72.0 132 37.9
Glyma.18G028100 Glycine max HOM05D001629 ORTHO05D004216 7.6e-11 71.6 130 39.2
FAN01G2659 Fragaria x ananassa HOM05D005539 ORTHO05D006644 9.9e-11 71.2 139 36.7
Nitab4.5_0002100g0050 Nicotiana tabacum HOM05D001629 ORTHO05D004216 9.9e-11 71.2 128 35.2
Phvul.001G242400 Phaseolus vulgaris HOM05D001629 ORTHO05D004216 9.9e-11 71.2 137 38.0
RcHm_v2.0_Chr1g0370091 Rosa chinensis HOM05D001629 ORTHO05D004216 1.3e-10 70.9 135 37.0
Gohir.A06G164000 Gossypium hirsutum HOM05D001629 ORTHO05D004216 1.7e-10 70.5 164 35.4
Lalb_Chr10g0105131 Lupinus albus HOM05D001629 ORTHO05D004216 1.7e-10 70.5 143 36.4
Nitab4.5_0004338g0090 Nicotiana tabacum HOM05D001629 ORTHO05D004216 1.7e-10 70.5 135 35.6
Peaxi162Scf00957g00223 Petunia axillaris HOM05D001629 ORTHO05D004216 1.7e-10 70.5 162 32.1
Hund13851 Selenicereus undatus HOM05D001629 ORTHO05D004216 1.7e-10 70.5 145 37.9
Ah.16g103460 Amaranthus hybridus HOM05D001629 ORTHO05D004216 2.2e-10 70.1 136 40.4
ClCG07G004130 Citrullus lanatus HOM05D001629 ORTHO05D004216 2.2e-10 70.1 129 39.5
CsaV3_5G010090 Cucumis sativus L. HOM05D001629 ORTHO05D004216 2.2e-10 70.1 130 39.2
SalBow6G5217 Salvia bowleyana HOM05D001629 ORTHO05D004216 2.2e-10 70.1 134 37.3
TPR.G2531 Trifolium pratense HOM05D001629 ORTHO05D004216 2.2e-10 70.1 143 36.4
TAR633G1117 Trochodendron aralioides HOM05D001629 ORTHO05D004216 2.2e-10 70.1 174 33.9
VMungo1383G2947 Vigna mungo HOM05D001629 ORTHO05D004216 2.9e-10 69.7 134 38.1
Glyma.11G229100 Glycine max HOM05D001629 ORTHO05D004216 3.8e-10 69.3 130 37.7
Gohir.D06G169300 Gossypium hirsutum HOM05D001629 ORTHO05D004216 3.8e-10 69.3 164 35.4
Gorai.010G198400 Gossypium raimondii HOM05D001629 ORTHO05D004216 3.8e-10 69.3 164 35.4
Solyc05g052750.3 Solanum lycopersicum HOM05D001629 ORTHO05D004216 3.8e-10 69.3 139 35.3
arahy.Tifrunner.gnm1.ann1.2VU9BG Arachis hypogaea HOM05D001629 ORTHO05D004216 4.9e-10 68.9 139 37.4
Nitab4.5_0000395g0050 Nicotiana tabacum HOM05D001629 ORTHO05D004216 4.9e-10 68.9 123 36.6
Duzib128G1394 Durio zibethinus HOM05D001629 ORTHO05D004216 6.4e-10 68.6 132 36.4
vmacro06974 Vaccinium macrocarpon HOM05D001629 ORTHO05D004216 8.4e-10 68.2 135 35.6
arahy.Tifrunner.gnm1.ann1.MMYB4K Arachis hypogaea HOM05D001629 ORTHO05D004216 1.1e-09 67.8 139 37.4
MELO3C025189.2 Cucumis melo HOM05D001629 ORTHO05D004216 1.1e-09 67.8 129 38.8
Duzib114G0106 Durio zibethinus HOM05D001629 ORTHO05D004216 1.1e-09 67.8 131 35.9
Lj1A954T15 Lonicera japonica HOM05D001629 ORTHO05D004216 1.4e-09 67.4 132 37.1
Aqoxy4G02578 Aquilegia oxysepala HOM05D001629 ORTHO05D004216 1.9e-09 67.0 162 33.3
arahy.Tifrunner.gnm1.ann1.WYEN9E Arachis hypogaea HOM05D001629 ORTHO05D004216 1.9e-09 67.0 136 36.0
Ciclev10032760m.g Citrus clementina HOM05D001629 ORTHO05D004216 1.9e-09 67.0 119 38.7
PGSC0003DMG400027185 Solanum tuberosum HOM05D001629 ORTHO05D004216 1.9e-09 67.0 137 34.3
arahy.Tifrunner.gnm1.ann1.01DT97 Arachis hypogaea HOM05D001629 ORTHO05D004216 2.4e-09 66.6 137 35.8
CSS0000908 Camellia sinensis var. sinensis HOM05D001629 ORTHO05D004216 2.4e-09 66.6 126 36.5
CsaV3_6G001810 Cucumis sativus L. HOM05D001629 ORTHO05D004216 2.4e-09 66.6 133 34.6
FAN06G4384 Fragaria x ananassa HOM05D005539 ORTHO05D006644 2.4e-09 66.6 108 38.0
Gohir.A13G015500 Gossypium hirsutum HOM05D001629 ORTHO05D004216 2.4e-09 66.6 121 38.0
Lalb_Chr18g0052581 Lupinus albus HOM05D001629 ORTHO05D004216 2.4e-09 66.6 130 36.9
Rhsim03G0143200 Rhododendron simsii HOM05D001629 ORTHO05D004216 2.4e-09 66.6 148 34.5
TWI73G0747 Tripterygium wilfordii HOM05D001629 ORTHO05D004216 2.4e-09 66.6 128 34.4
Actinidia00946 Actinidia chinensis HOM05D001629 ORTHO05D004216 3.2e-09 66.2 129 35.7
GSVIVG01032833001 Vitis vinifera HOM05D001629 ORTHO05D004216 3.2e-09 66.2 172 30.8
Oeu025640.3 Olea europaea HOM05D001629 ORTHO05D004216 4.2e-09 65.9 160 31.2
Thecc.10G019900 Theobroma cacao HOM05D001629 ORTHO05D004216 4.2e-09 65.9 133 36.1
Cpa.g.sc19.180 Carica papaya HOM05D001629 ORTHO05D004216 7.1e-09 65.1 137 33.6
Cc02_g06610 Coffea canephora HOM05D001629 ORTHO05D004216 7.1e-09 65.1 139 35.3
Peaxi162Scf01208g00135 Petunia axillaris HOM05D001629 ORTHO05D004216 7.1e-09 65.1 162 31.5
SalBow6G1496 Salvia bowleyana HOM05D001629 ORTHO05D004216 7.1e-09 65.1 126 37.3
Lj8A68T45 Lonicera japonica HOM05D001629 ORTHO05D004216 9.3e-09 64.7 140 34.3
Lalb_Chr08g0231731 Lupinus albus HOM05D001629 ORTHO05D004216 9.3e-09 64.7 119 37.8
Nn2g11483 Nelumbo nucifera HOM05D001629 ORTHO05D004216 9.3e-09 64.7 159 32.1
TAR636G0558 Trochodendron aralioides HOM05D001629 ORTHO05D004216 9.3e-09 64.7 150 34.7
VMungo0647G0798 Vigna mungo HOM05D001629 ORTHO05D004216 9.3e-09 64.7 140 35.0
Eucgr.G03058 Eucalyptus grandis HOM05D001629 ORTHO05D004216 1.2e-08 64.3 127 37.8
Oeu005848.1 Olea europaea HOM05D001629 ORTHO05D004216 1.2e-08 64.3 132 36.4
Sabra10G0146200 Salix brachista HOM05D001629 ORTHO05D004216 1.2e-08 64.3 132 34.8
Glyma.14G059800 Glycine max HOM05D001629 ORTHO05D004216 1.6e-08 63.9 138 36.2
Gorai.013G018400 Gossypium raimondii HOM05D001629 ORTHO05D004216 1.6e-08 63.9 121 37.2
MBI11_g32502_MAGBIO Magnolia biondii HOM05D001629 ORTHO05D004216 1.6e-08 63.9 133 36.1
MSTRG.207 Avicennia marina HOM05D001629 ORTHO05D004216 2.1e-08 63.5 135 35.6
CAN.G503.10 Capsicum annuum HOM05D001629 ORTHO05D004216 2.1e-08 63.5 137 34.3
Duzib106G0048 Durio zibethinus HOM05D001629 ORTHO05D004216 2.1e-08 63.5 135 35.6
Migut.F00678 Erythranthe guttata HOM05D001629 ORTHO05D004216 2.1e-08 63.5 119 36.1
HanXRQChr07g0202951 Helianthus annuus HOM05D001629 ORTHO05D004216 2.1e-08 63.5 128 36.7
Potri.008G067700 Populus trichocarpa HOM05D001629 ORTHO05D004216 2.7e-08 63.2 146 32.2
TWI09G1333 Tripterygium wilfordii HOM05D001629 ORTHO05D004216 2.7e-08 63.2 141 34.0
HanXRQChr14g0459821 Helianthus annuus HOM05D001629 ORTHO05D004216 3.5e-08 62.8 136 34.6
MSTRG.8952 Avicennia marina HOM05D001629 ORTHO05D004216 4.6e-08 62.4 119 35.3
AUR62012240 Chenopodium quinoa HOM05D001629 ORTHO05D004216 4.6e-08 62.4 123 39.8
Gohir.A10G235400 Gossypium hirsutum HOM05D001629 ORTHO05D004216 6.0e-08 62.0 160 31.9
Dinv17989 Davidia involucrata HOM05D001629 ORTHO05D004216 7.9e-08 61.6 132 34.1
Gohir.D10G247800 Gossypium hirsutum HOM05D001629 ORTHO05D004216 7.9e-08 61.6 160 31.9
Sopen05g031270 Solanum pennellii HOM05D001629 ORTHO05D004216 7.9e-08 61.6 113 36.3
CANSAT56G2974 Cannabis sativa HOM05D001629 ORTHO05D004216 1.0e-07 61.2 149 34.9
Gohir.D13G016700 Gossypium hirsutum HOM05D001629 ORTHO05D004216 1.0e-07 61.2 121 34.7
Lsat_1_v5_gn_9_61260 Lactuca sativa HOM05D001629 ORTHO05D004216 1.0e-07 61.2 128 33.6
Peaxi162Scf00825g00016 Petunia axillaris HOM05D001629 ORTHO05D004216 1.0e-07 61.2 124 35.5
BcaB02g07673 Brassica carinata HOM05D001629 ORTHO05D004216 1.3e-07 60.8 138 32.6
Gorai.011G286300 Gossypium raimondii HOM05D001629 ORTHO05D004216 1.3e-07 60.8 160 31.9
Glyma.02G256900 Glycine max HOM05D001629 ORTHO05D004216 1.8e-07 60.5 129 39.5
Gohir.A05G329600 Gossypium hirsutum HOM05D001629 ORTHO05D004216 2.3e-07 60.1 159 32.1
Manes.07G128800 Manihot esculenta HOM05D001629 ORTHO05D004216 2.3e-07 60.1 132 34.1
THA.LOC104824315 Tarenaya hassleriana HOM05D001629 ORTHO05D004216 2.3e-07 60.1 141 37.6
BcaC02g07351 Brassica carinata HOM05D001629 ORTHO05D004216 5.1e-07 58.9 132 34.1
C04p67780 Brassica napus HOM05D001629 ORTHO05D004216 5.1e-07 58.9 132 34.1
BolC4t28281H Brassica oleracea HOM05D001629 ORTHO05D004216 5.1e-07 58.9 132 34.1
PSO384G3980 Papaver somniferum HOM05D001629 ORTHO05D004216 5.1e-07 58.9 164 29.3
AT2G40095 Arabidopsis thaliana HOM05D001629 ORTHO05D004216 6.7e-07 58.5 132 34.1
A04p30080 Brassica napus HOM05D001629 ORTHO05D004216 6.7e-07 58.5 132 34.1
BolC3t15055H Brassica oleracea HOM05D001629 ORTHO05D004216 6.7e-07 58.5 132 34.1
BraA04t18499Z Brassica rapa HOM05D001629 ORTHO05D004216 6.7e-07 58.5 132 34.1
BcaC01g05434 Brassica carinata HOM05D001629 ORTHO05D004216 8.7e-07 58.2 132 34.1
BcaNung05465 Brassica carinata HOM05D001629 ORTHO05D004216 8.7e-07 58.2 131 32.1
BraA03t11481Z Brassica rapa HOM05D001629 ORTHO05D004216 1.1e-06 57.8 132 34.1
Gohir.D04G067600 Gossypium hirsutum HOM05D001629 ORTHO05D004216 1.1e-06 57.8 159 31.4
Gorai.012G076800 Gossypium raimondii HOM05D001629 ORTHO05D004216 1.1e-06 57.8 159 31.4
Manes.10G013500 Manihot esculenta HOM05D001629 ORTHO05D004216 1.1e-06 57.8 121 35.5
Nn2g13705 Nelumbo nucifera HOM05D001629 ORTHO05D004216 1.1e-06 57.8 121 34.7
A09p48860 Brassica napus HOM05D001629 ORTHO05D004216 1.5e-06 57.4 131 32.1
C08p31200 Brassica napus HOM05D001629 ORTHO05D004216 1.5e-06 57.4 131 32.1
BraA09t40341Z Brassica rapa HOM05D001629 ORTHO05D004216 1.5e-06 57.4 131 32.1
BolC6t37493H Brassica oleracea HOM05D001629 ORTHO05D004216 1.9e-06 57.0 137 31.4
BolC8t50743H Brassica oleracea HOM05D001629 ORTHO05D004216 1.9e-06 57.0 131 32.1
Carub.0004s2226 Capsella rubella HOM05D001629 ORTHO05D004216 1.9e-06 57.0 135 32.6
THA.LOC104810574 Tarenaya hassleriana HOM05D001629 ORTHO05D004216 1.9e-06 57.0 147 32.7
A03p22550 Brassica napus HOM05D001629 ORTHO05D004216 2.5e-06 56.6 132 33.3
BraA07t29937Z Brassica rapa HOM05D001629 ORTHO05D004216 3.3e-06 56.2 131 32.1
CARHR135060 Cardamine hirsuta HOM05D001629 ORTHO05D004216 4.3e-06 55.8 131 32.1
Thhalv10017237m.g Eutrema salsugineum HOM05D001629 ORTHO05D004216 4.3e-06 55.8 132 32.6
BcaC08g44754 Brassica carinata HOM05D001629 ORTHO05D004216 5.6e-06 55.5 131 32.1
C02p15570 Brassica napus HOM05D001629 ORTHO05D004216 5.6e-06 55.5 145 30.3
C06p23190 Brassica napus HOM05D001629 ORTHO05D004216 5.6e-06 55.5 131 32.1
PSO801G0446 Papaver somniferum HOM05D001629 ORTHO05D004216 5.6e-06 55.5 130 36.9
Lsat_1_v5_gn_2_122961 Lactuca sativa HOM05D001629 ORTHO05D004216 7.4e-06 55.1 144 31.2
DCAR_024832 Daucus carota HOM05D001629 ORTHO05D004216 9.6e-06 54.7 119 37.0
Potri.010G189600 Populus trichocarpa HOM05D001629 ORTHO05D004216 9.6e-06 54.7 132 31.8
Sp4g22400 Schrenkiella parvula HOM05D001629 ORTHO05D004216 9.6e-06 54.7 131 32.1


User provided reference genes

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