Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_003404 Vanilla planifolia HOM05D007033 ORTHO05D008770 1.4e-75 286.2 144 100.0
HPP92_003427 Vanilla planifolia HOM05D007033 ORTHO05D008770 2.7e-74 282.0 144 98.6
PGR042G3214 Punica granatum HOM05D007033 ORTHO05D008770 4.7e-39 164.9 131 63.4
TWI60G0127 Tripterygium wilfordii HOM05D007033 ORTHO05D008770 6.2e-39 164.5 112 70.5
Dinv43975 Davidia involucrata HOM05D007033 ORTHO05D008770 2.3e-38 162.5 108 68.5
PSO782G0028 Papaver somniferum HOM05D007033 ORTHO05D008770 4.0e-38 161.8 125 60.8
GSVIVG01011318001 Vitis vinifera HOM05D007033 ORTHO05D008770 4.0e-38 161.8 128 62.5
PSO063G1631 Papaver somniferum HOM05D007033 ORTHO05D008770 8.9e-38 160.6 122 60.7
Thecc.05G231700 Theobroma cacao HOM05D007033 ORTHO05D008770 8.9e-38 160.6 120 65.8
FvH4_7g07210 Fragaria vesca HOM05D007033 ORTHO05D008770 1.2e-37 160.2 125 62.4
FAN03G2679 Fragaria x ananassa HOM05D007033 ORTHO05D008770 2.0e-37 159.5 125 62.4
AT5G17610 Arabidopsis thaliana HOM05D007033 ORTHO05D008770 2.6e-37 159.1 113 68.1
CARHR195570 Cardamine hirsuta HOM05D007033 ORTHO05D008770 3.4e-37 158.7 105 73.3
FAN06G3925 Fragaria x ananassa HOM05D007033 ORTHO05D008770 3.4e-37 158.7 125 61.6
Hma1.2p1_0353F.1_g133340 Hydrangea macrophylla HOM05D007033 ORTHO05D008770 3.4e-37 158.7 107 68.2
Nn3g19225 Nelumbo nucifera HOM05D007033 ORTHO05D008770 3.4e-37 158.7 125 63.2
Gohir.A13G085300 Gossypium hirsutum HOM05D007033 ORTHO05D008770 7.5e-37 157.5 110 70.9
ClCG05G002970 Citrullus lanatus HOM05D007033 ORTHO05D008770 9.9e-37 157.1 118 65.3
Peaxi162Scf00592g00448 Petunia axillaris HOM05D007033 ORTHO05D008770 9.9e-37 157.1 122 60.7
CsaV3_3G010550 Cucumis sativus L. HOM05D007033 ORTHO05D008770 1.3e-36 156.8 118 64.4
Ciclev10033075m.g Citrus clementina HOM05D007033 ORTHO05D008770 1.7e-36 156.4 117 63.2
Gohir.D13G100400 Gossypium hirsutum HOM05D007033 ORTHO05D008770 1.7e-36 156.4 110 70.0
Gorai.013G112100 Gossypium raimondii HOM05D007033 ORTHO05D008770 1.7e-36 156.4 110 70.0
Eucgr.E01772 Eucalyptus grandis HOM05D007033 ORTHO05D008770 2.2e-36 156.0 110 67.3
Manes.08G157600 Manihot esculenta HOM05D007033 ORTHO05D008770 2.2e-36 156.0 129 61.2
Phvul.010G038500 Phaseolus vulgaris HOM05D007033 ORTHO05D008770 2.2e-36 156.0 107 69.2
Potri.013G073100 Populus trichocarpa HOM05D007033 ORTHO05D008770 2.2e-36 156.0 117 64.1
MELO3C006276.2 Cucumis melo HOM05D007033 ORTHO05D008770 3.7e-36 155.2 118 63.6
Rhsim12G0078100 Rhododendron simsii HOM05D007033 ORTHO05D008770 3.7e-36 155.2 113 63.7
AL6G28700 Arabidopsis lyrata HOM05D007033 ORTHO05D008770 4.9e-36 154.8 113 68.1
CDE12G0505 Ceratophyllum demersum HOM05D007033 ORTHO05D008770 4.9e-36 154.8 129 59.7
RcHm_v2.0_Chr1g0337311 Rosa chinensis HOM05D007033 ORTHO05D008770 4.9e-36 154.8 123 61.0
Thhalv10014961m.g Eutrema salsugineum HOM05D007033 ORTHO05D008770 6.4e-36 154.5 112 68.8
Sopen01g032780 Solanum pennellii HOM05D007033 ORTHO05D008770 6.4e-36 154.5 115 64.3
Glyma.03G098200 Glycine max HOM05D007033 ORTHO05D008770 8.3e-36 154.1 107 66.4
Solyc01g081200.3 Solanum lycopersicum HOM05D007033 ORTHO05D008770 1.1e-35 153.7 115 64.3
MD07G1078200 Malus domestica HOM05D007033 ORTHO05D008770 1.4e-35 153.3 119 64.7
VMungo0331G1478 Vigna mungo HOM05D007033 ORTHO05D008770 1.4e-35 153.3 107 69.2
Haze_15805 Corylus avellana HOM05D007033 ORTHO05D008770 1.9e-35 152.9 122 61.5
Glyma.07G123600 Glycine max HOM05D007033 ORTHO05D008770 1.9e-35 152.9 107 66.4
arahy.Tifrunner.gnm1.ann1.14YBGE Arachis hypogaea HOM05D007033 ORTHO05D008770 2.4e-35 152.5 121 62.0
MD02G1238400 Malus domestica HOM05D007033 ORTHO05D008770 2.4e-35 152.5 95 73.7
Sp6g26610 Schrenkiella parvula HOM05D007033 ORTHO05D008770 2.4e-35 152.5 112 67.0
Cc02_g26390 Coffea canephora HOM05D007033 ORTHO05D008770 3.2e-35 152.1 109 64.2
arahy.Tifrunner.gnm1.ann1.GIK8C1 Arachis hypogaea HOM05D007033 ORTHO05D008770 4.1e-35 151.8 121 61.2
Lalb_Chr12g0210181 Lupinus albus HOM05D007033 ORTHO05D008770 4.1e-35 151.8 115 62.6
THA.LOC104827245 Tarenaya hassleriana HOM05D007033 ORTHO05D008770 4.1e-35 151.8 118 66.9
C02p09210 Brassica napus HOM05D007033 ORTHO05D008770 5.4e-35 151.4 112 66.1
MBI16_g43713_MAGBIO Magnolia biondii HOM05D007033 ORTHO05D008770 5.4e-35 151.4 95 70.5
Prupe.2G100000 Prunus persica HOM05D007033 ORTHO05D008770 5.4e-35 151.4 128 60.9
PGSC0003DMG400001787 Solanum tuberosum HOM05D007033 ORTHO05D008770 5.4e-35 151.4 122 59.8
Actinidia21596 Actinidia chinensis HOM05D007033 ORTHO05D008770 7.1e-35 151.0 113 63.7
BcaC03g13530 Brassica carinata HOM05D007033 ORTHO05D008770 7.1e-35 151.0 112 66.1
BolC2t06829H Brassica oleracea HOM05D007033 ORTHO05D008770 7.1e-35 151.0 112 66.1
Carub.0006s1585 Capsella rubella HOM05D007033 ORTHO05D008770 7.1e-35 151.0 112 66.1
A02p04360 Brassica napus HOM05D007033 ORTHO05D008770 1.6e-34 149.8 112 65.2
BraA02t05400Z Brassica rapa HOM05D007033 ORTHO05D008770 1.6e-34 149.8 112 65.2
Sed0003013 Sechium edule HOM05D007033 ORTHO05D008770 3.5e-34 148.7 114 64.9
Sc23g0004770 Simmondsia chinensis HOM05D007033 ORTHO05D008770 3.5e-34 148.7 109 67.9
Aqoxy5G03237 Aquilegia oxysepala HOM05D007033 ORTHO05D008770 4.6e-34 148.3 113 63.7
ECA234G3633 Erigeron canadensis HOM05D007033 ORTHO05D008770 4.6e-34 148.3 116 58.6
CAN.G700.33 Capsicum annuum HOM05D007033 ORTHO05D008770 6.0e-34 147.9 114 61.4
CANSAT35G1406 Cannabis sativa HOM05D007033 ORTHO05D008770 1.0e-33 147.1 113 63.7
Zm00001eb009070 Zea mays HOM05D007033 ORTHO05D008770 1.0e-33 147.1 124 57.3
BcaC04g18775 Brassica carinata HOM05D007033 ORTHO05D008770 1.7e-33 146.4 115 64.3
C09p59560 Brassica napus HOM05D007033 ORTHO05D008770 1.7e-33 146.4 115 64.3
BolC9t58794H Brassica oleracea HOM05D007033 ORTHO05D008770 1.7e-33 146.4 115 64.3
HanXRQChr03g0088201 Helianthus annuus HOM05D007033 ORTHO05D008770 2.3e-33 146.0 109 61.5
EL10Ac1g00673 Beta vulgaris HOM05D007033 ORTHO05D008770 3.0e-33 145.6 114 60.5
Migut.B01441 Erythranthe guttata HOM05D007033 ORTHO05D008770 3.0e-33 145.6 115 60.0
Lj3g0004375 Lotus japonicus HOM05D007033 ORTHO05D008770 3.0e-33 145.6 96 69.8
vmacro21112 Vaccinium macrocarpon HOM05D007033 ORTHO05D008770 3.0e-33 145.6 89 71.9
CiPaw.02G048600 Carya illinoinensis HOM05D007033 ORTHO05D008770 6.6e-33 144.4 95 68.4
TPR.G17361 Trifolium pratense HOM05D007033 ORTHO05D008770 6.6e-33 144.4 107 63.6
Lsat_1_v5_gn_4_42281 Lactuca sativa HOM05D007033 ORTHO05D008770 8.6e-33 144.1 89 70.8
Sed0002871 Sechium edule HOM05D007033 ORTHO05D008770 1.2e-31 140.2 125 57.6
COL.COLO4_08541 Corchorus olitorius HOM05D007033 ORTHO05D008770 2.1e-31 139.4 108 63.0
Cfa003682 Carpinus fangiana HOM05D007033 ORTHO05D008770 4.7e-31 138.3 140 53.6
Hund17162 Selenicereus undatus HOM05D007033 ORTHO05D008770 4.7e-31 138.3 115 57.4
Sabra13G0063200 Salix brachista HOM05D007033 ORTHO05D008770 1.1e-30 137.1 100 67.0
SGA_v2.0_scaffold98G29399 Striga asiatica HOM05D007033 ORTHO05D008770 1.1e-30 137.1 126 56.3
QL04p052404 Quercus lobata HOM05D007033 ORTHO05D008770 1.8e-30 136.3 90 68.9
SalBow5G2417 Salvia bowleyana HOM05D007033 ORTHO05D008770 4.0e-30 135.2 99 66.7
MBI16_g43476_MAGBIO Magnolia biondii HOM05D007033 ORTHO05D008770 1.2e-29 133.7 100 64.0
Nitab4.5_0004800g0080 Nicotiana tabacum HOM05D007033 ORTHO05D008770 1.5e-29 133.3 95 64.2
Nitab4.5_0004594g0020 Nicotiana tabacum HOM05D007033 ORTHO05D008770 5.8e-29 131.3 104 59.6
Psat4g215800 Pisum sativum HOM05D007033 ORTHO05D008770 5.8e-29 131.3 99 61.6
unitig_8.g3853 Utricularia gibba HOM05D007033 ORTHO05D008770 1.7e-28 129.8 93 62.4
ATR0829G185 Amborella trichopoda HOM05D007033 ORTHO05D008770 2.9e-28 129.0 80 71.2
Sc23g0004660 Simmondsia chinensis HOM05D007033 ORTHO05D008770 2.9e-28 129.0 106 61.3
HPP92_025932 Vanilla planifolia HOM05D007033 ORTHO05D008770 8.4e-28 127.5 94 60.6
AUR62014520 Chenopodium quinoa HOM05D007033 ORTHO05D008770 1.4e-27 126.7 96 67.7
AUR62038014 Chenopodium quinoa HOM05D007033 ORTHO05D008770 1.2e-26 123.6 96 66.7
BraA10t44240Z Brassica rapa HOM05D007033 ORTHO05D008770 1.6e-26 123.2 89 67.4
Ah.05g177250 Amaranthus hybridus HOM05D007033 ORTHO05D008770 3.9e-25 118.6 104 58.7
AagrBONN_evm.TU.Sc2ySwM_368.1536 Anthoceros agrestis HOM05D007033 ORTHO05D008770 3.6e-23 112.1 104 49.0
SEGI_14041 Sequoiadendron giganteum HOM05D007033 ORTHO05D008770 8.1e-23 110.9 95 54.7
Pp3c19_9960 Physcomitrium patens HOM05D007033 ORTHO05D008770 3.4e-21 105.5 114 44.7
TAR629G3499 Trochodendron aralioides HOM05D007033 ORTHO05D008770 4.2e-19 98.6 53 79.2
SMO351G0381 Selaginella moellendorffii HOM05D007033 ORTHO05D008770 7.1e-19 97.8 102 47.1
A10p21800 Brassica napus HOM05D007033 ORTHO05D008770 1.2e-18 97.1 52 82.7
Mapoly0058s0110 Marchantia polymorpha HOM05D007033 ORTHO05D008770 1.2e-18 97.1 101 47.5
Pp3c7_5640 Physcomitrium patens HOM05D007033 ORTHO05D008770 2.3e-17 92.8 74 50.0
Pp3c18_1710 Physcomitrium patens HOM05D007033 ORTHO05D008770 2.1e-15 86.3 99 43.4
Atru.chr2.1689 Acer truncatum HOM05D007033 ORTHO05D008770 3.4e-13 79.0 40 80.0
Sopen05g015510 Solanum pennellii HOM05D007033 ORTHO05D008770 3.2e-11 72.4 57 57.9
Peaxi162Scf00117g01735 Petunia axillaris HOM05D007033 ORTHO05D008770 6.2e-07 58.2 63 52.4
PRCOL_00006026 Prasinoderma coloniale HOM05D007033 ORTHO05D008770 5.3e-06 55.1 78 34.6
CBR_g44313 Chara braunii HOM05D007033 ORTHO05D008770 9.0e-06 54.3 63 39.7


User provided reference genes

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