Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_003385 Vanilla planifolia HOM05D004676 ORTHO05D005661 8.3e-70 268.1 300 100.0
HPP92_003389 Vanilla planifolia HOM05D004676 ORTHO05D005661 6.4e-46 188.7 277 93.1
HanXRQChr01g0009481 Helianthus annuus HOM05D004676 ORTHO05D005661 6.2e-25 119.0 112 65.2
TAR633G1457 Trochodendron aralioides HOM05D004676 ORTHO05D005661 1.1e-24 118.2 115 66.1
THA.LOC104826325 Tarenaya hassleriana HOM05D004676 ORTHO05D005661 4.0e-24 116.3 126 62.7
THA.LOC104800662 Tarenaya hassleriana HOM05D004676 ORTHO05D005661 5.2e-24 115.9 114 65.8
MD03G1093300 Malus domestica HOM05D004676 ORTHO05D005661 8.9e-24 115.2 127 62.2
BraA07t29644Z Brassica rapa HOM05D004676 ORTHO05D005661 1.5e-23 114.4 124 62.1
Prupe.6G077300 Prunus persica HOM05D004676 ORTHO05D005661 1.5e-23 114.4 127 61.4
MD11G1108100 Malus domestica HOM05D004676 ORTHO05D005661 2.0e-23 114.0 127 60.6
BcaC02g11024 Brassica carinata HOM05D004676 ORTHO05D005661 2.6e-23 113.6 125 60.0
A07p19390 Brassica napus HOM05D004676 ORTHO05D005661 2.6e-23 113.6 125 63.2
C04p22070 Brassica napus HOM05D004676 ORTHO05D005661 2.6e-23 113.6 125 60.0
BolC4t23730H Brassica oleracea HOM05D004676 ORTHO05D005661 2.6e-23 113.6 125 60.0
CiPaw.13G094200 Carya illinoinensis HOM05D004676 ORTHO05D005661 5.8e-23 112.5 140 55.7
CsaV3_6G016860 Cucumis sativus L. HOM05D004676 ORTHO05D005661 7.6e-23 112.1 134 56.7
FvH4_3g36111 Fragaria vesca HOM05D004676 ORTHO05D005661 7.6e-23 112.1 115 62.6
FAN11G0391 Fragaria x ananassa HOM05D004676 ORTHO05D005661 7.6e-23 112.1 115 62.6
FAN25G1996 Fragaria x ananassa HOM05D004676 ORTHO05D005661 7.6e-23 112.1 115 62.6
AT2G28910 Arabidopsis thaliana HOM05D004676 ORTHO05D005661 9.9e-23 111.7 111 61.3
FAN16G2805 Fragaria x ananassa HOM05D004676 ORTHO05D005661 9.9e-23 111.7 115 62.6
RcHm_v2.0_Chr5g0064541 Rosa chinensis HOM05D004676 ORTHO05D005661 9.9e-23 111.7 115 60.9
Potri.001G148000 Populus trichocarpa HOM05D004676 ORTHO05D005661 1.7e-22 110.9 136 55.1
TAR677G0002 Trochodendron aralioides HOM05D004676 ORTHO05D005661 1.7e-22 110.9 110 60.0
Actinidia23939 Actinidia chinensis HOM05D004676 ORTHO05D005661 2.2e-22 110.5 118 56.8
Actinidia34405 Actinidia chinensis HOM05D004676 ORTHO05D005661 2.2e-22 110.5 113 55.8
MBI14_g16284_MAGBIO Magnolia biondii HOM05D004676 ORTHO05D005661 2.2e-22 110.5 112 64.3
Nn1g00565 Nelumbo nucifera HOM05D004676 ORTHO05D005661 2.2e-22 110.5 142 54.9
Haze_24097 Corylus avellana HOM05D004676 ORTHO05D005661 2.9e-22 110.2 112 64.3
Duzib168G2248 Durio zibethinus HOM05D004676 ORTHO05D005661 2.9e-22 110.2 137 57.7
MELO3C025917.2 Cucumis melo HOM05D004676 ORTHO05D005661 3.8e-22 109.8 134 55.2
SHI01165 Sapria himalayana HOM05D004676 ORTHO05D005661 3.8e-22 109.8 119 49.6
CDE04G1893 Ceratophyllum demersum HOM05D004676 ORTHO05D005661 6.4e-22 109.0 117 58.1
CDE07G0255 Ceratophyllum demersum HOM05D004676 ORTHO05D005661 1.1e-21 108.2 117 59.8
FAN21G2159 Fragaria x ananassa HOM05D004676 ORTHO05D005661 1.1e-21 108.2 139 56.1
Gohir.A07G098600 Gossypium hirsutum HOM05D004676 ORTHO05D005661 1.1e-21 108.2 138 55.8
Gohir.D07G102900 Gossypium hirsutum HOM05D004676 ORTHO05D005661 1.1e-21 108.2 138 55.8
Gorai.001G110800 Gossypium raimondii HOM05D004676 ORTHO05D005661 1.1e-21 108.2 138 55.8
Sabra01G0116300 Salix brachista HOM05D004676 ORTHO05D005661 1.1e-21 108.2 136 46.3
Sabra01G0117800 Salix brachista HOM05D004676 ORTHO05D005661 1.1e-21 108.2 136 46.3
Sp4g11720 Schrenkiella parvula HOM05D004676 ORTHO05D005661 1.1e-21 108.2 127 59.8
TAR100G0004 Trochodendron aralioides HOM05D004676 ORTHO05D005661 1.1e-21 108.2 115 60.9
SGA_v2.0_scaffold154G37155 Striga asiatica HOM05D004676 ORTHO05D005661 1.4e-21 107.8 120 60.8
Eucgr.E01963 Eucalyptus grandis HOM05D004676 ORTHO05D005661 1.9e-21 107.5 119 61.3
Thecc.09G321600 Theobroma cacao HOM05D004676 ORTHO05D005661 1.9e-21 107.5 134 53.7
AL4G23440 Arabidopsis lyrata HOM05D004676 ORTHO05D005661 2.4e-21 107.1 112 66.1
Oeu019194.1 Olea europaea HOM05D004676 ORTHO05D005661 2.4e-21 107.1 113 61.1
ECA248G3797 Erigeron canadensis HOM05D004676 ORTHO05D005661 3.2e-21 106.7 111 64.0
PGR119G2251 Punica granatum HOM05D004676 ORTHO05D005661 3.2e-21 106.7 121 63.6
Haze_12047 Corylus avellana HOM05D004676 ORTHO05D005661 5.4e-21 105.9 115 64.3
Carub.0004s0990 Capsella rubella HOM05D004676 ORTHO05D005661 7.1e-21 105.5 112 61.6
Manes.02G133000 Manihot esculenta HOM05D004676 ORTHO05D005661 7.1e-21 105.5 110 51.8
SEGI_40255 Sequoiadendron giganteum HOM05D004676 ORTHO05D005661 7.1e-21 105.5 117 53.8
Sc21g0005490 Simmondsia chinensis HOM05D004676 ORTHO05D005661 7.1e-21 105.5 116 63.8
Aa31LG5G7310 Aethionema arabicum HOM05D004676 ORTHO05D005661 9.3e-21 105.1 123 54.5
CARHR122080 Cardamine hirsuta HOM05D004676 ORTHO05D005661 9.3e-21 105.1 125 60.0
Lj1P153T22 Lonicera japonica HOM05D004676 ORTHO05D005661 9.3e-21 105.1 116 60.3
Aqoxy7G03598 Aquilegia oxysepala HOM05D004676 ORTHO05D005661 1.2e-20 104.8 73 71.2
BolC4t27336H Brassica oleracea HOM05D004676 ORTHO05D005661 1.2e-20 104.8 124 56.5
Lsat_1_v5_gn_5_170600 Lactuca sativa HOM05D004676 ORTHO05D005661 1.2e-20 104.8 78 64.1
Eucgr.E01882 Eucalyptus grandis HOM05D004676 ORTHO05D005661 1.6e-20 104.4 74 67.6
Atru.chr3.3906 Acer truncatum HOM05D004676 ORTHO05D005661 2.1e-20 104.0 138 51.4
Dinv12426 Davidia involucrata HOM05D004676 ORTHO05D005661 2.1e-20 104.0 137 53.3
SGA_v2.0_scaffold47G17549 Striga asiatica HOM05D004676 ORTHO05D005661 3.5e-20 103.2 119 59.7
Ah.04g160390 Amaranthus hybridus HOM05D004676 ORTHO05D005661 4.6e-20 102.8 118 60.2
unitig_0.g1557 Utricularia gibba HOM05D004676 ORTHO05D005661 4.6e-20 102.8 133 54.9
BcaB02g10212 Brassica carinata HOM05D004676 ORTHO05D005661 7.8e-20 102.1 116 64.7
Nitab4.5_0003154g0010 Nicotiana tabacum HOM05D004676 ORTHO05D005661 7.8e-20 102.1 125 57.6
Peaxi162Scf00045g00052 Petunia axillaris HOM05D004676 ORTHO05D005661 7.8e-20 102.1 115 62.6
Rhsim01G0227600 Rhododendron simsii HOM05D004676 ORTHO05D005661 7.8e-20 102.1 118 62.7
Cfa011505 Carpinus fangiana HOM05D004676 ORTHO05D005661 1.0e-19 101.7 113 60.2
ClCG02G020150 Citrullus lanatus HOM05D004676 ORTHO05D005661 1.0e-19 101.7 98 53.1
Ciclev10028807m.g Citrus clementina HOM05D004676 ORTHO05D005661 1.0e-19 101.7 128 58.6
Cc01_g12890 Coffea canephora HOM05D004676 ORTHO05D005661 1.0e-19 101.7 124 56.5
Nitab4.5_0005880g0060 Nicotiana tabacum HOM05D004676 ORTHO05D005661 1.0e-19 101.7 126 58.7
QL09p008735 Quercus lobata HOM05D004676 ORTHO05D005661 1.0e-19 101.7 80 65.0
unitig_747.g22032 Utricularia gibba HOM05D004676 ORTHO05D005661 1.0e-19 101.7 114 58.8
vmacro05212 Vaccinium macrocarpon HOM05D004676 ORTHO05D005661 1.0e-19 101.7 56 85.7
AUR62000799 Chenopodium quinoa HOM05D004676 ORTHO05D005661 1.3e-19 101.3 116 61.2
Nitab4.5_0001424g0070 Nicotiana tabacum HOM05D004676 ORTHO05D005661 1.3e-19 101.3 113 62.8
Os09g0103700 Oryza sativa ssp. japonica HOM05D004676 ORTHO05D005661 1.3e-19 101.3 128 57.8
Sed0011846 Sechium edule HOM05D004676 ORTHO05D005661 1.3e-19 101.3 113 61.9
Solyc08g005450.3 Solanum lycopersicum HOM05D004676 ORTHO05D005661 1.7e-19 100.9 64 75.0
PGSC0003DMG400018489 Solanum tuberosum HOM05D004676 ORTHO05D005661 1.7e-19 100.9 64 75.0
Lj5g0019317 Lotus japonicus HOM05D004676 ORTHO05D005661 2.3e-19 100.5 117 47.9
Sopen08g001490 Solanum pennellii HOM05D004676 ORTHO05D005661 2.3e-19 100.5 64 75.0
AUR62005169 Chenopodium quinoa HOM05D004676 ORTHO05D005661 3.0e-19 100.1 116 60.3
Hund18907 Selenicereus undatus HOM05D004676 ORTHO05D005661 3.0e-19 100.1 118 62.7
PSO339G5531 Papaver somniferum HOM05D004676 ORTHO05D005661 3.9e-19 99.8 77 64.9
Phvul.007G016200 Phaseolus vulgaris HOM05D004676 ORTHO05D005661 3.9e-19 99.8 113 54.9
Thecc.09G321800 Theobroma cacao HOM05D004676 ORTHO05D005661 3.9e-19 99.8 111 60.4
Cpa.g.sc81.149 Carica papaya HOM05D004676 ORTHO05D005661 5.1e-19 99.4 110 63.6
Glyma.20G104700 Glycine max HOM05D004676 ORTHO05D005661 5.1e-19 99.4 114 57.0
PSO151G0082 Papaver somniferum HOM05D004676 ORTHO05D005661 5.1e-19 99.4 77 64.9
Manes.01G173800 Manihot esculenta HOM05D004676 ORTHO05D005661 6.6e-19 99.0 94 59.6
CiPaw.14G068300 Carya illinoinensis HOM05D004676 ORTHO05D005661 8.7e-19 98.6 102 53.9
Eucgr.E01961 Eucalyptus grandis HOM05D004676 ORTHO05D005661 8.7e-19 98.6 119 58.0
Hma1.2p1_0418F.1_g149200 Hydrangea macrophylla HOM05D004676 ORTHO05D005661 8.7e-19 98.6 116 59.5
ATR0733G034 Amborella trichopoda HOM05D004676 ORTHO05D005661 1.1e-18 98.2 81 60.5
ECA233G5350 Erigeron canadensis HOM05D004676 ORTHO05D005661 1.1e-18 98.2 111 56.8
arahy.Tifrunner.gnm1.ann1.ID2MIU Arachis hypogaea HOM05D004676 ORTHO05D005661 1.9e-18 97.4 118 55.9
Cpa.g.sc161.42 Carica papaya HOM05D004676 ORTHO05D005661 1.9e-18 97.4 136 52.9
Migut.L00671 Erythranthe guttata HOM05D004676 ORTHO05D005661 1.9e-18 97.4 76 64.5
A04p05090 Brassica napus HOM05D004676 ORTHO05D005661 2.5e-18 97.1 110 62.7
A04p21940 Brassica napus HOM05D004676 ORTHO05D005661 2.5e-18 97.1 110 62.7
BraA04t17761Z Brassica rapa HOM05D004676 ORTHO05D005661 2.5e-18 97.1 110 62.7
CAN.G137.34 Capsicum annuum HOM05D004676 ORTHO05D005661 2.5e-18 97.1 76 60.5
RcHm_v2.0_Chr5g0064551 Rosa chinensis HOM05D004676 ORTHO05D005661 3.3e-18 96.7 127 52.0
TAR588G0001 Trochodendron aralioides HOM05D004676 ORTHO05D005661 4.3e-18 96.3 115 55.7
Migut.D02100 Erythranthe guttata HOM05D004676 ORTHO05D005661 5.6e-18 95.9 60 71.7
Oeu051436.2 Olea europaea HOM05D004676 ORTHO05D005661 7.3e-18 95.5 77 64.9
Lalb_Chr06g0163861 Lupinus albus HOM05D004676 ORTHO05D005661 9.6e-18 95.1 129 45.0
DCAR_024536 Daucus carota HOM05D004676 ORTHO05D005661 1.6e-17 94.4 88 55.7
Migut.L00698 Erythranthe guttata HOM05D004676 ORTHO05D005661 1.6e-17 94.4 92 56.5
Lalb_Chr02g0143571 Lupinus albus HOM05D004676 ORTHO05D005661 1.6e-17 94.4 130 47.7
TPR.G18864 Trifolium pratense HOM05D004676 ORTHO05D005661 1.6e-17 94.4 116 56.9
TWI75G1679 Tripterygium wilfordii HOM05D004676 ORTHO05D005661 2.1e-17 94.0 88 56.8
Glyma.10G284600 Glycine max HOM05D004676 ORTHO05D005661 2.8e-17 93.6 112 57.1
Zm00001eb095710 Zea mays HOM05D004676 ORTHO05D005661 2.8e-17 93.6 57 78.9
TWI79G0464 Tripterygium wilfordii HOM05D004676 ORTHO05D005661 4.8e-17 92.8 88 56.8
Zm00001eb307410 Zea mays HOM05D004676 ORTHO05D005661 6.2e-17 92.4 47 87.2
RcHm_v2.0_Chr5g0064811 Rosa chinensis HOM05D004676 ORTHO05D005661 8.1e-17 92.0 142 47.9
EL10Ac4g09397 Beta vulgaris HOM05D004676 ORTHO05D005661 1.4e-16 91.3 121 59.5
Psat0s2898g0040 Pisum sativum HOM05D004676 ORTHO05D005661 1.4e-16 91.3 113 57.5
DCAR_025381 Daucus carota HOM05D004676 ORTHO05D005661 1.8e-16 90.9 88 55.7
VMungo0720G1898 Vigna mungo HOM05D004676 ORTHO05D005661 2.4e-16 90.5 115 54.8
Ca_11220_v3 Cicer arietinum L. HOM05D004676 ORTHO05D005661 3.1e-16 90.1 114 52.6
Eucgr.J02052 Eucalyptus grandis HOM05D004676 ORTHO05D005661 4.0e-16 89.7 120 54.2
RcHm_v2.0_Chr5g0064841 Rosa chinensis HOM05D004676 ORTHO05D005661 4.0e-16 89.7 91 53.8
FvH4_3g36120 Fragaria vesca HOM05D002246 ORTHO05D002308 5.3e-16 89.4 130 46.9
Mapoly0006s0051 Marchantia polymorpha HOM05D004676 ORTHO05D005661 5.3e-16 89.4 111 53.2
TAR625G0807 Trochodendron aralioides HOM05D004676 ORTHO05D005661 5.3e-16 89.4 115 57.4
CBR_g53496 Chara braunii HOM05D004676 ORTHO05D137281 6.9e-16 89.0 72 59.7
TAR383G0008 Trochodendron aralioides HOM05D004676 ORTHO05D005661 6.9e-16 89.0 115 57.4
TAR455G0002 Trochodendron aralioides HOM05D004676 ORTHO05D005661 6.9e-16 89.0 115 57.4
CANSAT21G2535 Cannabis sativa HOM05D004676 ORTHO05D005661 9.0e-16 88.6 142 48.6
Pp3c8_12040 Physcomitrium patens HOM05D004676 ORTHO05D005661 2.6e-15 87.0 121 41.3
AagrBONN_evm.TU.Sc2ySwM_228.4612 Anthoceros agrestis HOM05D004676 ORTHO05D005661 3.4e-15 86.7 67 61.2
Os05g0297400 Oryza sativa ssp. japonica HOM05D004676 ORTHO05D005661 4.5e-15 86.3 115 45.2
BcaC02g08125 Brassica carinata HOM05D004676 ORTHO05D005661 7.6e-15 85.5 74 56.8
FAN11G1736 Fragaria x ananassa HOM05D002246 ORTHO05D002308 7.6e-15 85.5 130 46.2
Ca_09918_v3 Cicer arietinum L. HOM05D004676 ORTHO05D005661 2.9e-14 83.6 53 67.9
COL.COLO4_18509 Corchorus olitorius HOM05D004676 ORTHO05D005661 1.1e-13 81.6 105 44.8
SMO117G0168 Selaginella moellendorffii HOM05D004676 ORTHO05D005661 1.2e-12 78.2 65 60.0
ECA247G4102 Erigeron canadensis HOM05D004676 ORTHO05D005661 1.4e-08 64.7 59 55.9
SEGI_06382 Sequoiadendron giganteum HOM05D004676 ORTHO05D005661 2.0e-07 60.8 40 67.5
ECA233G0785 Erigeron canadensis HOM05D004676 ORTHO05D005661 4.5e-07 59.7 134 37.3
C04p58100 Brassica napus HOM05D004676 ORTHO05D005661 3.8e-06 56.6 50 58.0
ECA233G0017 Erigeron canadensis HOM05D004676 ORTHO05D005661 3.8e-06 56.6 42 66.7
ATR0693G379 Amborella trichopoda HOM05D004676 ORTHO05D005661 4.9e-06 56.2 74 44.6


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