Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_003083 Vanilla planifolia HOM05D008092 ORTHO05D010277 6.1e-100 367.5 182 100.0
TAR374G1215 Trochodendron aralioides HOM05D008092 ORTHO05D010277 3.9e-38 162.2 179 45.3
MBI10_g33304_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 4.7e-36 155.2 167 45.5
GSVIVG01032429001 Vitis vinifera HOM05D008092 ORTHO05D010277 1.9e-32 143.3 173 39.9
CDE02G4384 Ceratophyllum demersum HOM05D008092 ORTHO05D010277 7.1e-32 141.4 170 41.8
MBI10_g44380_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 7.8e-31 137.9 195 41.5
Dinv33463 Davidia involucrata HOM05D008092 ORTHO05D010277 1.5e-29 133.7 177 41.2
QL02p075225 Quercus lobata HOM05D008092 ORTHO05D010277 5.6e-29 131.7 164 42.1
QL93p1842_0091 Quercus lobata HOM05D008092 ORTHO05D010277 5.6e-29 131.7 172 42.4
Atru.chr6.2355 Acer truncatum HOM05D008092 ORTHO05D010277 1.6e-28 130.2 173 38.7
Actinidia06006 Actinidia chinensis HOM05D008092 ORTHO05D010277 2.1e-28 129.8 172 40.7
CiPaw.04G027500 Carya illinoinensis HOM05D008092 ORTHO05D010277 2.1e-28 129.8 158 41.8
vmacro05852 Vaccinium macrocarpon HOM05D008092 ORTHO05D010277 2.8e-28 129.4 169 38.5
Manes.17G115000 Manihot esculenta HOM05D008092 ORTHO05D010277 1.4e-27 127.1 171 40.4
Gohir.A10G102700 Gossypium hirsutum HOM05D008092 ORTHO05D010277 1.8e-27 126.7 129 47.3
Gohir.D10G086900 Gossypium hirsutum HOM05D008092 ORTHO05D010277 4.0e-27 125.6 129 46.5
Gorai.011G095100 Gossypium raimondii HOM05D008092 ORTHO05D010277 5.2e-27 125.2 129 46.5
Cfa007393 Carpinus fangiana HOM05D008092 ORTHO05D010277 1.2e-26 124.0 183 38.8
CANSAT64G0606 Cannabis sativa HOM05D008092 ORTHO05D010277 4.4e-26 122.1 173 39.9
Duzib187G1326 Durio zibethinus HOM05D008092 ORTHO05D010277 4.4e-26 122.1 174 37.9
PGR083G2137 Punica granatum HOM05D008092 ORTHO05D010277 4.4e-26 122.1 160 40.0
HanXRQChr09g0255051 Helianthus annuus HOM05D008092 ORTHO05D010277 1.3e-25 120.6 164 39.6
Lsat_1_v5_gn_4_183520 Lactuca sativa HOM05D008092 ORTHO05D010277 3.8e-25 119.0 169 36.1
Thecc.04G015000 Theobroma cacao HOM05D008092 ORTHO05D010277 8.4e-25 117.9 129 44.2
TWI36G1451 Tripterygium wilfordii HOM05D008092 ORTHO05D010277 8.4e-25 117.9 175 35.4
CiPaw.02G035400 Carya illinoinensis HOM05D008092 ORTHO05D010277 4.2e-24 115.5 163 41.1
CiPaw.03G041800 Carya illinoinensis HOM05D008092 ORTHO05D010277 5.4e-24 115.2 163 40.5
Glyma.05G005000 Glycine max HOM05D008092 ORTHO05D010277 1.2e-23 114.0 164 39.6
Cc00_g25440 Coffea canephora HOM05D008092 ORTHO05D010277 1.6e-23 113.6 112 42.9
Nitab4.5_0000118g0190 Nicotiana tabacum HOM05D008092 ORTHO05D010277 2.1e-23 113.2 128 41.4
CSS0000484 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 2.7e-23 112.8 178 34.3
CSS0015151 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 2.7e-23 112.8 178 34.3
Phvul.004G010900 Phaseolus vulgaris HOM05D008092 ORTHO05D010277 4.6e-23 112.1 166 38.6
COL.COLO4_29084 Corchorus olitorius HOM05D008092 ORTHO05D010277 1.3e-22 110.5 113 44.2
Psat1g056120 Pisum sativum HOM05D008092 ORTHO05D010277 3.0e-22 109.4 146 37.0
Rhsim10G0018500 Rhododendron simsii HOM05D008092 ORTHO05D010277 5.1e-22 108.6 199 33.2
arahy.Tifrunner.gnm1.ann1.KZ8L38 Arachis hypogaea HOM05D008092 ORTHO05D010277 6.6e-22 108.2 169 37.3
arahy.Tifrunner.gnm1.ann1.M07V8F Arachis hypogaea HOM05D008092 ORTHO05D010277 6.6e-22 108.2 169 37.3
Glyma.19G005600 Glycine max HOM05D008092 ORTHO05D010277 8.7e-22 107.8 165 37.0
MD17G1030500 Malus domestica HOM05D008092 ORTHO05D010277 1.5e-21 107.1 177 35.6
Lj2g0022146 Lotus japonicus HOM05D008092 ORTHO05D010277 4.3e-21 105.5 161 36.6
Prupe.3G289300 Prunus persica HOM05D008092 ORTHO05D010277 7.3e-21 104.8 174 35.6
Eucgr.I01759 Eucalyptus grandis HOM05D008092 ORTHO05D010277 8.1e-20 101.3 111 45.0
CsaV3_3G042670 Cucumis sativus L. HOM05D008092 ORTHO05D010277 2.4e-19 99.8 159 36.5
DCAR_021714 Daucus carota HOM05D008092 ORTHO05D010277 9.0e-19 97.8 117 39.3
ECA232G1487 Erigeron canadensis HOM05D008092 ORTHO05D010277 9.0e-19 97.8 127 40.9
Lalb_Chr02g0156941 Lupinus albus HOM05D008092 ORTHO05D010277 9.0e-19 97.8 114 38.6
TPR.G14075 Trifolium pratense HOM05D008092 ORTHO05D010277 9.0e-19 97.8 171 32.7
PSO017G5173 Papaver somniferum HOM05D008092 ORTHO05D010277 2.6e-18 96.3 179 33.5
PSO478G3237 Papaver somniferum HOM05D008092 ORTHO05D010277 2.6e-18 96.3 179 33.5
Sc03g0007590 Simmondsia chinensis HOM05D008092 ORTHO05D010277 4.5e-18 95.5 173 31.2
Cpa.g.sc108.51 Carica papaya HOM05D008092 ORTHO05D010277 7.6e-18 94.7 168 33.9
Medtr6g005430 Medicago truncatula HOM05D008092 ORTHO05D010277 7.6e-18 94.7 108 41.7
Eucgr.I01763 Eucalyptus grandis HOM05D008092 ORTHO05D010277 1.7e-17 93.6 112 43.8
VMungo0464G1885 Vigna mungo HOM05D008092 ORTHO05D010277 1.7e-17 93.6 164 34.8
Mapoly0035s0098 Marchantia polymorpha HOM05D008092 ORTHO05D010277 1.2e-15 87.4 118 36.4
Pp3c2_13540 Physcomitrium patens HOM05D008092 ORTHO05D010277 2.3e-14 83.2 187 28.3
Nn3g16773 Nelumbo nucifera HOM05D008092 ORTHO05D010277 1.1e-13 80.9 173 30.6
Oeu063467.1 Olea europaea HOM05D008092 ORTHO05D010277 2.6e-10 69.7 98 35.7
Nitab4.5_0002306g0010 Nicotiana tabacum HOM05D008092 ORTHO05D010277 6.4e-09 65.1 93 34.4
Pp3c3_2330 Physcomitrium patens HOM05D008092 ORTHO05D010277 1.9e-08 63.5 108 31.5
HanXRQChr09g0268661 Helianthus annuus HOM05D008092 ORTHO05D010277 4.6e-07 58.9 64 43.8
Zm00001eb336670 Zea mays HOM05D008092 ORTHO05D010277 1.3e-06 57.4 64 43.8
MELO3C009977.2 Cucumis melo HOM05D008092 ORTHO05D010277 1.8e-06 57.0 102 38.2
TPR.G15211 Trifolium pratense HOM05D008092 ORTHO05D010277 2.3e-06 56.6 107 33.6


User provided reference genes

Program Settings