Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_003073 Vanilla planifolia HOM05D006903 ORTHO05D008655 8.9e-87 323.6 161 100.0
MBI10_g08549_MAGBIO Magnolia biondii HOM05D006903 ORTHO05D008655 1.1e-49 200.3 162 64.2
TAR629G3475 Trochodendron aralioides HOM05D006903 ORTHO05D008655 1.6e-48 196.4 166 60.2
GSVIVG01011964001 Vitis vinifera HOM05D006903 ORTHO05D008655 2.8e-48 195.7 166 59.6
Nn3g17696 Nelumbo nucifera HOM05D006903 ORTHO05D008655 3.7e-48 195.3 170 62.4
Lj2g0014822 Lotus japonicus HOM05D006903 ORTHO05D008655 8.1e-48 194.1 163 60.1
PSO478G5279 Papaver somniferum HOM05D006903 ORTHO05D008655 2.0e-46 189.5 164 59.1
PSO017G3486 Papaver somniferum HOM05D006903 ORTHO05D008655 5.8e-46 188.0 164 59.1
Zm00001eb252440 Zea mays HOM05D006903 ORTHO05D008655 5.8e-46 188.0 161 57.8
Atru.chr11.1372 Acer truncatum HOM05D006903 ORTHO05D008655 7.6e-46 187.6 167 58.7
CsaV3_5G033920 Cucumis sativus L. HOM05D006903 ORTHO05D008655 7.6e-46 187.6 167 58.1
Cpa.g.sc1.226 Carica papaya HOM05D006903 ORTHO05D008655 9.9e-46 187.2 162 61.1
Manes.06G073100 Manihot esculenta HOM05D006903 ORTHO05D008655 1.3e-45 186.8 168 57.1
Dinv16514 Davidia involucrata HOM05D006903 ORTHO05D008655 2.2e-45 186.0 166 56.0
FAN22G1870 Fragaria x ananassa HOM05D006903 ORTHO05D008655 2.2e-45 186.0 168 59.5
Lalb_Chr04g0254991 Lupinus albus HOM05D006903 ORTHO05D008655 2.9e-45 185.7 166 58.4
TPR.G22411 Trifolium pratense HOM05D006903 ORTHO05D008655 3.8e-45 185.3 167 56.3
CSS0045037 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 4.9e-45 184.9 167 58.1
FvH4_4g28200 Fragaria vesca HOM05D006903 ORTHO05D008655 6.4e-45 184.5 168 58.9
FAN12G3275 Fragaria x ananassa HOM05D006903 ORTHO05D008655 6.4e-45 184.5 168 58.9
MD13G1047700 Malus domestica HOM05D006903 ORTHO05D008655 6.4e-45 184.5 169 56.2
Migut.E00291 Erythranthe guttata HOM05D006903 ORTHO05D008655 2.4e-44 182.6 165 55.2
QL01p001027 Quercus lobata HOM05D006903 ORTHO05D008655 2.4e-44 182.6 169 57.4
Phvul.003G026200 Phaseolus vulgaris HOM05D006903 ORTHO05D008655 3.2e-44 182.2 166 56.6
Hund05771 Selenicereus undatus HOM05D006903 ORTHO05D008655 4.2e-44 181.8 165 58.8
Ca_26576_v3 Cicer arietinum L. HOM05D006903 ORTHO05D008655 5.5e-44 181.4 169 56.2
Duzib248G0677 Durio zibethinus HOM05D006903 ORTHO05D008655 5.5e-44 181.4 167 58.1
Sc04g0006770 Simmondsia chinensis HOM05D006903 ORTHO05D008655 5.5e-44 181.4 167 59.9
Glyma.02G101000 Glycine max HOM05D006903 ORTHO05D008655 9.3e-44 180.6 166 57.2
Haze_17427 Corylus avellana HOM05D006903 ORTHO05D008655 1.2e-43 180.3 166 57.2
Haze_17428 Corylus avellana HOM05D006903 ORTHO05D008655 1.2e-43 180.3 166 57.2
MELO3C012210.2 Cucumis melo HOM05D006903 ORTHO05D008655 1.2e-43 180.3 175 54.3
Hma1.2p1_0406F.1_g145980 Hydrangea macrophylla HOM05D006903 ORTHO05D008655 1.6e-43 179.9 165 57.0
vmacro10523 Vaccinium macrocarpon HOM05D006903 ORTHO05D008655 1.6e-43 179.9 167 56.3
DCAR_030091 Daucus carota HOM05D006903 ORTHO05D008655 2.7e-43 179.1 168 57.7
Oeu044621.1 Olea europaea HOM05D006903 ORTHO05D008655 2.7e-43 179.1 163 57.7
Psat0s629g0200 Pisum sativum HOM05D006903 ORTHO05D008655 2.7e-43 179.1 165 56.4
Rhsim09G0113100 Rhododendron simsii HOM05D006903 ORTHO05D008655 2.7e-43 179.1 167 59.3
Sabra10G0099600 Salix brachista HOM05D006903 ORTHO05D008655 3.5e-43 178.7 167 56.3
Cfa018642 Carpinus fangiana HOM05D006903 ORTHO05D008655 1.3e-42 176.8 166 56.6
Cc11_g10700 Coffea canephora HOM05D006903 ORTHO05D008655 1.3e-42 176.8 164 54.9
Prupe.1G304300 Prunus persica HOM05D006903 ORTHO05D008655 1.3e-42 176.8 169 55.0
arahy.Tifrunner.gnm1.ann1.9PC4TR Arachis hypogaea HOM05D006903 ORTHO05D008655 1.8e-42 176.4 165 55.8
arahy.Tifrunner.gnm1.ann1.RDH5GK Arachis hypogaea HOM05D006903 ORTHO05D008655 1.8e-42 176.4 165 55.8
Sed0022387 Sechium edule HOM05D006903 ORTHO05D008655 1.8e-42 176.4 171 57.9
Thecc.02G362300 Theobroma cacao HOM05D006903 ORTHO05D008655 1.8e-42 176.4 167 55.7
Actinidia14845 Actinidia chinensis HOM05D006903 ORTHO05D008655 2.3e-42 176.0 167 56.9
Potri.010G130700 Populus trichocarpa HOM05D006903 ORTHO05D008655 3.0e-42 175.6 167 55.1
BraA08t34657Z Brassica rapa HOM05D006903 ORTHO05D008655 5.1e-42 174.9 163 57.1
RcHm_v2.0_Chr4g0435961 Rosa chinensis HOM05D006903 ORTHO05D008655 5.1e-42 174.9 168 56.0
SGA_v2.0_scaffold14G06815 Striga asiatica HOM05D006903 ORTHO05D008655 6.7e-42 174.5 168 57.1
A08p27120 Brassica napus HOM05D006903 ORTHO05D008655 8.7e-42 174.1 163 57.1
FAN17G3035 Fragaria x ananassa HOM05D006903 ORTHO05D008655 1.1e-41 173.7 165 55.8
ECA246G0069 Erigeron canadensis HOM05D006903 ORTHO05D008655 1.5e-41 173.3 169 56.8
Gorai.005G137600 Gossypium raimondii HOM05D006903 ORTHO05D008655 1.9e-41 172.9 164 54.3
Medtr5g053280 Medicago truncatula HOM05D006903 ORTHO05D008655 1.9e-41 172.9 167 54.5
Nitab4.5_0005803g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 1.9e-41 172.9 167 55.7
EL10Ac6g14516 Beta vulgaris HOM05D006903 ORTHO05D008655 2.5e-41 172.6 163 57.1
ClCG05G023070 Citrullus lanatus HOM05D006903 ORTHO05D008655 2.5e-41 172.6 174 54.6
VMungo1215G2648 Vigna mungo HOM05D006903 ORTHO05D008655 2.5e-41 172.6 165 54.5
Eucgr.G02357 Eucalyptus grandis HOM05D006903 ORTHO05D008655 4.3e-41 171.8 165 55.8
Peaxi162Scf00367g00739 Petunia axillaris HOM05D006903 ORTHO05D008655 5.6e-41 171.4 167 54.5
ATR0053G028 Amborella trichopoda HOM05D006903 ORTHO05D008655 7.4e-41 171.0 162 55.6
PGSC0003DMG400000822 Solanum tuberosum HOM05D006903 ORTHO05D008655 7.4e-41 171.0 167 54.5
Aqoxy3G00382 Aquilegia oxysepala HOM05D006903 ORTHO05D008655 1.3e-40 170.2 165 53.9
CAN.G184.79 Capsicum annuum HOM05D006903 ORTHO05D008655 1.3e-40 170.2 167 55.1
CANSAT64G1629 Cannabis sativa HOM05D006903 ORTHO05D008655 1.6e-40 169.9 166 53.6
PGR119G0052 Punica granatum HOM05D006903 ORTHO05D008655 2.8e-40 169.1 167 55.1
AT1G26090 Arabidopsis thaliana HOM05D006903 ORTHO05D008655 3.7e-40 168.7 170 52.4
Sopen05g005730 Solanum pennellii HOM05D006903 ORTHO05D008655 3.7e-40 168.7 167 54.5
Aa31LG7G8910 Aethionema arabicum HOM05D006903 ORTHO05D008655 4.8e-40 168.3 167 55.7
AUR62002930 Chenopodium quinoa HOM05D006903 ORTHO05D008655 4.8e-40 168.3 166 53.0
SalBow8G1412 Salvia bowleyana HOM05D006903 ORTHO05D008655 4.8e-40 168.3 166 55.4
Sp1g22600 Schrenkiella parvula HOM05D006903 ORTHO05D008655 4.8e-40 168.3 171 57.3
AL1G39690 Arabidopsis lyrata HOM05D006903 ORTHO05D008655 8.2e-40 167.5 170 51.8
BcaB03g12083 Brassica carinata HOM05D006903 ORTHO05D008655 1.1e-39 167.2 165 55.8
Lsat_1_v5_gn_3_58300 Lactuca sativa HOM05D006903 ORTHO05D008655 2.4e-39 166.0 170 52.4
unitig_62.g23710 Utricularia gibba HOM05D006903 ORTHO05D008655 3.1e-39 165.6 165 55.8
HanXRQChr15g0476011 Helianthus annuus HOM05D006903 ORTHO05D008655 1.2e-38 163.7 166 54.2
Thhalv10007585m.g Eutrema salsugineum HOM05D006903 ORTHO05D008655 1.5e-38 163.3 170 55.9
C03p72740 Brassica napus HOM05D006903 ORTHO05D008655 2.6e-38 162.5 163 54.6
BolC3t19572H Brassica oleracea HOM05D006903 ORTHO05D008655 2.6e-38 162.5 163 54.6
Carub.0001s2488 Capsella rubella HOM05D006903 ORTHO05D008655 1.3e-37 160.2 170 51.2
CARHR025840 Cardamine hirsuta HOM05D006903 ORTHO05D008655 1.3e-37 160.2 171 52.6
Lj3C1020T9 Lonicera japonica HOM05D006903 ORTHO05D008655 4.9e-37 158.3 164 52.4
CiPaw.16G002500 Carya illinoinensis HOM05D006903 ORTHO05D008655 3.2e-36 155.6 149 56.4
AagrBONN_evm.TU.Sc2ySwM_117.1113 Anthoceros agrestis HOM05D006903 ORTHO05D008655 2.7e-35 152.5 161 50.3
FAN07G2589 Fragaria x ananassa HOM05D006903 ORTHO05D008655 7.9e-35 151.0 168 51.2
Pp3c6_9390 Physcomitrium patens HOM05D006903 ORTHO05D008655 4.3e-33 145.2 163 47.9
Mapoly0088s0003 Marchantia polymorpha HOM05D006903 ORTHO05D008655 1.8e-31 139.8 153 47.7
COL.COLO4_07859 Corchorus olitorius HOM05D006903 ORTHO05D008655 2.6e-30 136.0 165 48.5
Nitab4.5_0004705g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 5.9e-30 134.8 167 47.3
AUR62007740 Chenopodium quinoa HOM05D006903 ORTHO05D008655 1.2e-27 127.1 138 50.0
SMO367G1048 Selaginella moellendorffii HOM05D006903 ORTHO05D008655 1.9e-25 119.8 160 43.1
Ah.03g137980 Amaranthus hybridus HOM05D006903 ORTHO05D008655 4.1e-23 112.1 155 41.9
SEGI_13133 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 5.3e-23 111.7 121 49.6
SEGI_18137 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 5.3e-23 111.7 121 49.6
TWI31G1007 Tripterygium wilfordii HOM05D006903 ORTHO05D008655 3.8e-21 105.5 127 48.0
Glyma.01G089202 Glycine max HOM05D006903 ORTHO05D008655 1.0e-18 97.4 118 48.3
Ciclev10033640m.g Citrus clementina HOM05D006903 ORTHO05D008655 3.9e-18 95.5 123 44.7
Potri.008G115401 Populus trichocarpa HOM05D006903 ORTHO05D008655 3.9e-18 95.5 123 45.5


User provided reference genes

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