Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_003030 Vanilla planifolia HOM05D006836 ORTHO05D008691 5.7e-132 474.2 227 100.0
TAR629G0496 Trochodendron aralioides HOM05D006836 ORTHO05D008691 2.5e-42 176.4 235 40.0
FvH4_6g40480 Fragaria vesca HOM05D006836 ORTHO05D008691 2.1e-41 173.3 193 47.2
Nn1g07540 Nelumbo nucifera HOM05D006836 ORTHO05D008691 6.1e-41 171.8 245 39.2
Prupe.3G195700 Prunus persica HOM05D006836 ORTHO05D008691 1.0e-40 171.0 207 46.9
Lj6g0007987 Lotus japonicus HOM05D006836 ORTHO05D008691 1.4e-40 170.6 192 49.0
MD09G1129600 Malus domestica HOM05D006836 ORTHO05D008691 3.0e-40 169.5 194 45.9
PGR031G1777 Punica granatum HOM05D006836 ORTHO05D008691 3.0e-40 169.5 202 47.5
COL.COLO4_19642 Corchorus olitorius HOM05D006836 ORTHO05D008691 5.2e-40 168.7 200 45.0
RcHm_v2.0_Chr2g0155731 Rosa chinensis HOM05D006836 ORTHO05D008691 5.2e-40 168.7 198 44.9
Dinv21313 Davidia involucrata HOM05D006836 ORTHO05D008691 8.8e-40 167.9 198 44.9
MBI14_g24036_MAGBIO Magnolia biondii HOM05D006836 ORTHO05D008691 1.5e-39 167.2 201 46.8
Ca_16339_v3 Cicer arietinum L. HOM05D006836 ORTHO05D008691 2.6e-39 166.4 193 47.2
Actinidia09801 Actinidia chinensis HOM05D006836 ORTHO05D008691 3.3e-39 166.0 203 45.3
Cpa.g.sc136.39 Carica papaya HOM05D006836 ORTHO05D008691 9.7e-39 164.5 198 45.5
FAN02G3194 Fragaria x ananassa HOM05D006836 ORTHO05D008691 1.7e-38 163.7 193 44.6
MELO3C025942.2 Cucumis melo HOM05D006836 ORTHO05D008691 2.8e-38 162.9 201 45.8
Lalb_Chr10g0094621 Lupinus albus HOM05D006836 ORTHO05D008691 2.8e-38 162.9 203 43.8
Thecc.01G198300 Theobroma cacao HOM05D006836 ORTHO05D008691 3.7e-38 162.5 198 44.9
CiPaw.03G283000 Carya illinoinensis HOM05D006836 ORTHO05D008691 4.8e-38 162.2 202 44.1
ClCG02G009110 Citrullus lanatus HOM05D006836 ORTHO05D008691 4.8e-38 162.2 108 69.4
CANSAT64G2876 Cannabis sativa HOM05D006836 ORTHO05D008691 6.3e-38 161.8 202 44.1
Gohir.A07G192900 Gossypium hirsutum HOM05D006836 ORTHO05D008691 6.3e-38 161.8 176 49.4
Gorai.001G223100 Gossypium raimondii HOM05D006836 ORTHO05D008691 6.3e-38 161.8 176 49.4
TPR.G16170 Trifolium pratense HOM05D006836 ORTHO05D008691 8.2e-38 161.4 192 45.8
Rhsim06G0178100 Rhododendron simsii HOM05D006836 ORTHO05D008691 1.1e-37 161.0 202 43.6
TWI75G1319 Tripterygium wilfordii HOM05D006836 ORTHO05D008691 1.4e-37 160.6 192 47.9
Gohir.D07G199300 Gossypium hirsutum HOM05D006836 ORTHO05D008691 1.8e-37 160.2 176 48.3
QL04p067653 Quercus lobata HOM05D006836 ORTHO05D008691 1.8e-37 160.2 200 44.5
CSS0020520 Camellia sinensis var. sinensis HOM05D006836 ORTHO05D008691 2.4e-37 159.8 222 41.4
DCAR_012739 Daucus carota HOM05D006836 ORTHO05D008691 2.4e-37 159.8 204 43.6
Phvul.L001691 Phaseolus vulgaris HOM05D006836 ORTHO05D008691 2.4e-37 159.8 192 44.8
Hund15463 Selenicereus undatus HOM05D006836 ORTHO05D008691 2.4e-37 159.8 213 44.1
Glyma.13G010200 Glycine max HOM05D006836 ORTHO05D008691 4.1e-37 159.1 203 43.8
VMungo0647G0281 Vigna mungo HOM05D006836 ORTHO05D008691 4.1e-37 159.1 192 46.4
Manes.13G060700 Manihot esculenta HOM05D006836 ORTHO05D008691 5.3e-37 158.7 196 45.4
GSVIVG01030118001 Vitis vinifera HOM05D006836 ORTHO05D008691 5.3e-37 158.7 195 45.1
vmacro12068 Vaccinium macrocarpon HOM05D006836 ORTHO05D008691 1.2e-36 157.5 197 44.7
Ciclev10015848m.g Citrus clementina HOM05D006836 ORTHO05D008691 1.6e-36 157.1 94 74.5
Potri.014G169200 Populus trichocarpa HOM05D006836 ORTHO05D008691 1.6e-36 157.1 195 45.1
Duzib133G0147 Durio zibethinus HOM05D006836 ORTHO05D008691 2.0e-36 156.8 210 43.8
Zm00001eb176810 Zea mays HOM05D006836 ORTHO05D008691 7.7e-36 154.8 145 54.5
arahy.Tifrunner.gnm1.ann1.GSTV0Y Arachis hypogaea HOM05D006836 ORTHO05D008691 1.0e-35 154.5 203 46.3
PSO541G5262 Papaver somniferum HOM05D006836 ORTHO05D008691 1.0e-35 154.5 210 42.4
Haze_12601 Corylus avellana HOM05D006836 ORTHO05D008691 1.7e-35 153.7 201 42.8
CsaV3_6G009720 Cucumis sativus L. HOM05D006836 ORTHO05D008691 1.7e-35 153.7 94 73.4
Os08g0345400 Oryza sativa ssp. japonica HOM05D006836 ORTHO05D008691 2.2e-35 153.3 92 69.6
Eucgr.K01397 Eucalyptus grandis HOM05D006836 ORTHO05D008691 5.0e-35 152.1 104 63.5
arahy.Tifrunner.gnm1.ann1.M09JG2 Arachis hypogaea HOM05D006836 ORTHO05D008691 6.5e-35 151.8 203 45.3
Psat5g104760 Pisum sativum HOM05D006836 ORTHO05D008691 6.5e-35 151.8 195 43.1
Glyma.20G060000 Glycine max HOM05D006836 ORTHO05D008691 8.5e-35 151.4 209 42.6
PSO675G1370 Papaver somniferum HOM05D006836 ORTHO05D008691 8.5e-35 151.4 205 42.4
Sed0023251 Sechium edule HOM05D006836 ORTHO05D008691 1.5e-34 150.6 143 50.3
AUR62014994 Chenopodium quinoa HOM05D006836 ORTHO05D008691 1.9e-34 150.2 220 40.5
Haze_12612 Corylus avellana HOM05D006836 ORTHO05D008691 2.5e-34 149.8 203 41.9
SEGI_40154 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 2.5e-34 149.8 146 51.4
Nitab4.5_0004852g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 3.2e-34 149.4 104 64.4
Cfa014210 Carpinus fangiana HOM05D006836 ORTHO05D008691 4.2e-34 149.1 201 42.3
Sopen07g023830 Solanum pennellii HOM05D006836 ORTHO05D008691 5.5e-34 148.7 103 66.0
Peaxi162Scf00612g00142 Petunia axillaris HOM05D006836 ORTHO05D008691 9.4e-34 147.9 103 65.0
Aqoxy1G03080 Aquilegia oxysepala HOM05D006836 ORTHO05D008691 2.7e-33 146.4 202 42.1
PGSC0003DMG400017381 Solanum tuberosum HOM05D006836 ORTHO05D008691 2.7e-33 146.4 103 65.0
Solyc07g045300.4 Solanum lycopersicum HOM05D006836 ORTHO05D008691 3.6e-33 146.0 103 66.0
EL10Ac9g22661 Beta vulgaris HOM05D006836 ORTHO05D008691 6.1e-33 145.2 203 42.9
Sc21g0000470 Simmondsia chinensis HOM05D006836 ORTHO05D008691 6.1e-33 145.2 92 68.5
Oeu037218.2 Olea europaea HOM05D000879 ORTHO05D008691 1.0e-32 144.4 91 67.0
Migut.M00056 Erythranthe guttata HOM05D006836 ORTHO05D008691 3.0e-32 142.9 91 68.1
SGA_v2.0_scaffold73G24492 Striga asiatica HOM05D006836 ORTHO05D008691 4.0e-32 142.5 93 67.7
BcaB06g26781 Brassica carinata HOM05D006836 ORTHO05D008691 5.2e-32 142.1 198 40.9
Sabra14G0129000 Salix brachista HOM05D006836 ORTHO05D008691 2.6e-31 139.8 250 35.6
Aa31sc202G50 Aethionema arabicum HOM05D006836 ORTHO05D008691 3.4e-31 139.4 200 41.0
BcaC06g35865 Brassica carinata HOM05D006836 ORTHO05D008691 4.4e-31 139.0 198 41.9
BolC7t41479H Brassica oleracea HOM05D006836 ORTHO05D008691 4.4e-31 139.0 198 41.9
C07p10290 Brassica napus HOM05D006836 ORTHO05D008691 5.7e-31 138.7 190 42.1
AT2G04360 Arabidopsis thaliana HOM05D006836 ORTHO05D008691 7.5e-31 138.3 96 63.5
AL3G42030 Arabidopsis lyrata HOM05D006836 ORTHO05D008691 9.8e-31 137.9 199 42.2
Thhalv10002607m.g Eutrema salsugineum HOM05D006836 ORTHO05D008691 1.3e-30 137.5 96 63.5
A07p06710 Brassica napus HOM05D006836 ORTHO05D008691 1.7e-30 137.1 127 51.2
Carub.0003s2604 Capsella rubella HOM05D006836 ORTHO05D008691 1.7e-30 137.1 96 63.5
CARHR102220 Cardamine hirsuta HOM05D006836 ORTHO05D008691 2.8e-30 136.3 96 63.5
THA.LOC104808842 Tarenaya hassleriana HOM05D006836 ORTHO05D008691 2.8e-30 136.3 100 60.0
unitig_62.g23534 Utricularia gibba HOM05D000211 ORTHO05D002682 2.8e-30 136.3 104 57.7
MSTRG.14912 Avicennia marina HOM05D006836 ORTHO05D008691 3.7e-30 136.0 93 64.5
BraA07t28465Z Brassica rapa HOM05D006836 ORTHO05D008691 3.7e-30 136.0 200 41.0
Medtr3g082680 Medicago truncatula HOM05D006836 ORTHO05D008691 1.4e-29 134.0 87 69.0
Lsat_1_v5_gn_7_97361 Lactuca sativa HOM05D006836 ORTHO05D008691 1.6e-28 130.6 196 39.3
Sp3g23200 Schrenkiella parvula HOM05D006836 ORTHO05D008691 2.7e-28 129.8 94 61.7
Cc00_g01020 Coffea canephora HOM05D006836 ORTHO05D008691 1.7e-27 127.1 91 61.5
SEGI_21977 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 2.2e-27 126.7 133 48.1
HanXRQChr11g0329431 Helianthus annuus HOM05D006836 ORTHO05D008691 3.8e-27 125.9 194 37.1
Ah.01g002500 Amaranthus hybridus HOM05D006836 ORTHO05D008691 7.2e-26 121.7 78 66.7
SMO270G0068 Selaginella moellendorffii HOM05D006836 ORTHO05D008691 1.6e-25 120.6 94 57.4
FAN10G4054 Fragaria x ananassa HOM05D006836 ORTHO05D008691 6.1e-25 118.6 193 37.3
FAN14G0130 Fragaria x ananassa HOM05D006836 ORTHO05D008691 6.1e-25 118.6 193 37.3
HPP92_027527 Vanilla planifolia HOM05D006836 ORTHO05D008691 1.0e-24 117.9 61 88.5
AUR62029127 Chenopodium quinoa HOM05D006836 ORTHO05D008691 1.4e-24 117.5 92 57.6
ATR0751G245 Amborella trichopoda HOM05D006836 ORTHO05D008691 3.0e-24 116.3 76 65.8
AagrBONN_evm.TU.Sc2ySwM_117.1494 Anthoceros agrestis HOM05D006836 ORTHO05D008691 4.4e-23 112.5 85 58.8
Nitab4.5_0005354g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 7.5e-23 111.7 104 51.9
Mapoly0098s0007 Marchantia polymorpha HOM05D006836 ORTHO05D008691 3.7e-22 109.4 91 57.1
ECA236G0162 Erigeron canadensis HOM05D006836 ORTHO05D008691 2.4e-21 106.7 72 62.5
Pp3c23_16310 Physcomitrium patens HOM05D006836 ORTHO05D008691 4.1e-21 105.9 117 43.6
CBR_g3513 Chara braunii HOM05D006836 ORTHO05D000407 9.1e-21 104.8 232 28.4
Lj8A137G50 Lonicera japonica HOM05D006836 ORTHO05D008691 7.7e-20 101.7 95 49.5
Cre05.g234750 Chlamydomonas reinhardtii HOM05D006836 ORTHO05D008691 3.3e-18 96.3 112 46.4
CDE10G1136 Ceratophyllum demersum HOM05D006836 ORTHO05D008691 6.6e-11 72.0 44 75.0
Hma1.2p1_0599F.1_g187040 Hydrangea macrophylla HOM05D006836 ORTHO05D008691 3.1e-08 63.2 110 35.5
Mapoly0098s0053 Marchantia polymorpha HOM05D001007 ORTHO05D008005 3.1e-08 63.2 81 38.3
Oeu056862.1 Olea europaea HOM05D006836 ORTHO05D008691 6.4e-06 55.5 56 50.0


User provided reference genes

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