Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_002930 Vanilla planifolia HOM05D005913 ORTHO05D007138 2.2e-120 435.6 221 100.0
HPP92_028632 Vanilla planifolia HOM05D005913 ORTHO05D007138 1.2e-110 403.3 256 83.6
Nn2g15825 Nelumbo nucifera HOM05D005913 ORTHO05D007138 2.5e-55 219.5 239 53.6
ATR0681G105 Amborella trichopoda HOM05D005913 ORTHO05D007138 6.8e-53 211.5 153 71.9
CSS0006724 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 8.8e-53 211.1 253 51.0
Peaxi162Scf00228g00514 Petunia axillaris HOM05D000044 ORTHO05D007138 1.5e-52 210.3 197 60.4
Cpa.g.sc112.8 Carica papaya HOM05D005913 ORTHO05D007138 2.0e-52 209.9 196 61.7
CSS0022052 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 3.4e-52 209.1 211 55.9
TAR633G1775 Trochodendron aralioides HOM05D005913 ORTHO05D007138 1.7e-51 206.8 225 53.8
PGSC0003DMG402011001 Solanum tuberosum HOM05D005913 ORTHO05D007138 3.7e-51 205.7 239 51.9
Oeu008301.1 Olea europaea HOM05D005913 ORTHO05D007138 4.8e-51 205.3 181 61.3
Rhsim01G0236700 Rhododendron simsii HOM05D005913 ORTHO05D007138 6.3e-51 204.9 212 55.7
Sopen10g034140 Solanum pennellii HOM05D005913 ORTHO05D007138 8.3e-51 204.5 239 51.5
Nitab4.5_0000037g0040 Nicotiana tabacum HOM05D005913 ORTHO05D007138 1.1e-50 204.1 190 60.5
QL05p072708 Quercus lobata HOM05D005913 ORTHO05D007138 1.1e-50 204.1 197 59.4
Solyc10g084700.2 Solanum lycopersicum HOM05D005913 ORTHO05D007138 1.8e-50 203.4 239 51.0
PGSC0003DMG400016288 Solanum tuberosum HOM05D005913 ORTHO05D007138 2.4e-50 203.0 182 60.4
TWI31G0765 Tripterygium wilfordii HOM05D005913 ORTHO05D007138 4.1e-50 202.2 216 53.7
arahy.Tifrunner.gnm1.ann1.6RYY2X Arachis hypogaea HOM05D005913 ORTHO05D007138 5.4e-50 201.8 216 54.2
Lsat_1_v5_gn_9_20000 Lactuca sativa HOM05D005913 ORTHO05D007138 7.0e-50 201.4 201 55.7
Dinv25093 Davidia involucrata HOM05D005913 ORTHO05D007138 9.1e-50 201.1 236 53.8
Dinv28648 Davidia involucrata HOM05D005913 ORTHO05D007138 9.1e-50 201.1 217 56.2
Eucgr.J01039 Eucalyptus grandis HOM05D005913 ORTHO05D007138 9.1e-50 201.1 214 54.2
HanXRQChr16g0518331 Helianthus annuus HOM05D005913 ORTHO05D007138 9.1e-50 201.1 143 69.9
CiPaw.13G076700 Carya illinoinensis HOM05D005913 ORTHO05D007138 1.6e-49 200.3 223 53.4
Hma1.2p1_1287F.1_g273300 Hydrangea macrophylla HOM05D005913 ORTHO05D007138 2.0e-49 199.9 227 52.9
ECA247G1367 Erigeron canadensis HOM05D005913 ORTHO05D007138 4.5e-49 198.7 148 67.6
CDE04G2145 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 7.7e-49 198.0 168 63.1
vmacro14595 Vaccinium macrocarpon HOM05D005913 ORTHO05D007138 1.3e-48 197.2 223 50.7
GSVIVG01024730001 Vitis vinifera HOM05D005913 ORTHO05D007138 1.3e-48 197.2 218 53.7
Thecc.09G300200 Theobroma cacao HOM05D005913 ORTHO05D007138 2.2e-48 196.4 233 52.8
CAN.G324.3 Capsicum annuum HOM05D005913 ORTHO05D007138 2.9e-48 196.1 190 57.4
Sc21g0006380 Simmondsia chinensis HOM05D005913 ORTHO05D007138 2.9e-48 196.1 179 63.1
Sc21g0006400 Simmondsia chinensis HOM05D005913 ORTHO05D007138 3.8e-48 195.7 225 52.9
Lj3A585T46 Lonicera japonica HOM05D005913 ORTHO05D007138 5.0e-48 195.3 211 52.6
Os10g0500500 Oryza sativa ssp. japonica HOM05D005913 ORTHO05D007138 5.0e-48 195.3 157 63.1
MELO3C025845.2 Cucumis melo HOM05D005913 ORTHO05D007138 1.1e-47 194.1 260 48.8
CsaV3_6G016190 Cucumis sativus L. HOM05D005913 ORTHO05D007138 1.1e-47 194.1 223 53.4
Sed0020527 Sechium edule HOM05D005913 ORTHO05D007138 1.1e-47 194.1 202 57.4
Cc01_g14290 Coffea canephora HOM05D005913 ORTHO05D007138 1.5e-47 193.7 197 55.8
Duzib150G0854 Durio zibethinus HOM05D005913 ORTHO05D007138 2.5e-47 193.0 233 51.5
MSTRG.24154 Avicennia marina HOM05D005913 ORTHO05D007138 4.2e-47 192.2 219 52.5
MD11G1073200 Malus domestica HOM05D005913 ORTHO05D007138 4.2e-47 192.2 218 52.8
Manes.10G106300 Manihot esculenta HOM05D005913 ORTHO05D007138 4.2e-47 192.2 151 65.6
Prupe.6G056500 Prunus persica HOM05D005913 ORTHO05D007138 7.2e-47 191.4 148 68.2
Ca_09509_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 2.1e-46 189.9 197 57.4
Ca_30058_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 2.1e-46 189.9 197 57.4
Glyma.05G235600 Glycine max HOM05D005913 ORTHO05D007138 2.7e-46 189.5 169 62.1
Lalb_Chr19g0128221 Lupinus albus HOM05D005913 ORTHO05D007138 2.7e-46 189.5 219 50.7
SGA_v2.0_scaffold25G11107 Striga asiatica HOM05D005913 ORTHO05D007138 2.7e-46 189.5 206 53.4
AUR62020144 Chenopodium quinoa HOM05D005913 ORTHO05D007138 8.0e-46 188.0 213 52.6
LjContig00155g0009730 Lotus japonicus HOM05D005913 ORTHO05D007138 1.0e-45 187.6 213 51.6
RcHm_v2.0_Chr5g0069871 Rosa chinensis HOM05D005913 ORTHO05D007138 1.0e-45 187.6 154 64.9
PGR044G1475 Punica granatum HOM05D005913 ORTHO05D007138 2.3e-45 186.4 178 57.9
DCAR_002129 Daucus carota HOM05D005913 ORTHO05D007138 3.0e-45 186.0 245 49.4
VMungo0647G0764 Vigna mungo HOM05D005913 ORTHO05D007138 4.0e-45 185.7 159 62.9
Medtr7g117410 Medicago truncatula HOM05D005913 ORTHO05D007138 5.2e-45 185.3 210 52.4
Hund09257 Selenicereus undatus HOM05D005913 ORTHO05D007138 5.2e-45 185.3 212 51.4
Gorai.013G259900 Gossypium raimondii HOM05D005913 ORTHO05D007138 6.8e-45 184.9 218 52.3
AUR62001638 Chenopodium quinoa HOM05D005913 ORTHO05D007138 8.8e-45 184.5 213 51.6
Gohir.A13G224200 Gossypium hirsutum HOM05D005913 ORTHO05D007138 8.8e-45 184.5 211 53.1
Zm00001eb012770 Zea mays HOM05D005913 ORTHO05D007138 1.5e-44 183.7 157 61.1
Psat3g002480 Pisum sativum HOM05D005913 ORTHO05D007138 2.0e-44 183.3 151 64.2
EL10Ac7g16180 Beta vulgaris HOM05D005913 ORTHO05D007138 3.4e-44 182.6 234 48.3
DCAR_012499 Daucus carota HOM05D005913 ORTHO05D007138 4.4e-44 182.2 228 49.1
FAN11G0587 Fragaria x ananassa HOM05D005913 ORTHO05D007138 4.4e-44 182.2 216 50.0
FAN25G2063 Fragaria x ananassa HOM05D005913 ORTHO05D007138 4.4e-44 182.2 216 49.5
Aqoxy4G02545 Aquilegia oxysepala HOM05D005913 ORTHO05D007138 5.7e-44 181.8 148 66.9
CANSAT56G2716 Cannabis sativa HOM05D005913 ORTHO05D007138 9.8e-44 181.0 190 54.2
Cfa011705 Carpinus fangiana HOM05D005913 ORTHO05D007138 9.8e-44 181.0 158 62.0
FAN16G2194 Fragaria x ananassa HOM05D005913 ORTHO05D007138 9.8e-44 181.0 217 49.3
Gohir.D13G228900 Gossypium hirsutum HOM05D005913 ORTHO05D007138 1.3e-43 180.6 218 51.4
FvH4_3g38720 Fragaria vesca HOM05D005913 ORTHO05D007138 1.7e-43 180.3 216 49.5
FAN21G0630 Fragaria x ananassa HOM05D005913 ORTHO05D007138 1.7e-43 180.3 216 49.5
TAR369G0609 Trochodendron aralioides HOM05D005913 ORTHO05D007138 2.2e-43 179.9 140 66.4
Zm00001eb142300 Zea mays HOM05D005913 ORTHO05D007138 4.9e-43 178.7 155 60.6
Phvul.001G033300 Phaseolus vulgaris HOM05D005913 ORTHO05D007138 6.3e-43 178.3 157 63.7
Ciclev10029073m.g Citrus clementina HOM05D005913 ORTHO05D007138 1.1e-42 177.6 217 49.8
Migut.N03298 Erythranthe guttata HOM05D005913 ORTHO05D007138 1.4e-42 177.2 154 62.3
PSO675G7356 Papaver somniferum HOM05D005913 ORTHO05D007138 4.1e-42 175.6 229 45.9
Sabra06G0131300 Salix brachista HOM05D005913 ORTHO05D007138 4.1e-42 175.6 215 50.2
PSO801G0017 Papaver somniferum HOM05D005913 ORTHO05D007138 9.2e-42 174.5 213 48.4
CDE04G2770 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 1.2e-41 174.1 216 49.5
Peaxi162Scf00384g00045 Petunia axillaris HOM05D005913 ORTHO05D007138 2.7e-41 172.9 236 46.2
PSO339G4526 Papaver somniferum HOM05D005913 ORTHO05D007138 4.5e-41 172.2 213 47.4
Potri.006G170500 Populus trichocarpa HOM05D005913 ORTHO05D007138 5.9e-41 171.8 209 50.2
Haze_24336 Corylus avellana HOM05D005913 ORTHO05D007138 2.3e-40 169.9 252 45.6
COL.COLO4_19170 Corchorus olitorius HOM05D005913 ORTHO05D001548 6.6e-40 168.3 240 48.3
CARHR006930 Cardamine hirsuta HOM05D005913 ORTHO05D007138 3.3e-39 166.0 158 56.3
Ah.15g099480 Amaranthus hybridus HOM05D005913 ORTHO05D007138 1.2e-38 164.1 229 46.7
Thhalv10008508m.g Eutrema salsugineum HOM05D005913 ORTHO05D007138 1.4e-37 160.6 179 53.6
C05p05290 Brassica napus HOM05D005913 ORTHO05D007138 3.0e-37 159.5 158 56.3
A10p05770 Brassica napus HOM05D005913 ORTHO05D007138 4.0e-37 159.1 158 56.3
BraA10t42838Z Brassica rapa HOM05D005913 ORTHO05D007138 4.0e-37 159.1 158 56.3
BolC5t29300H Brassica oleracea HOM05D005913 ORTHO05D007138 6.8e-37 158.3 158 55.7
BcaC07g42452 Brassica carinata HOM05D005913 ORTHO05D007138 4.4e-36 155.6 157 54.1
AT1G07210 Arabidopsis thaliana HOM05D005913 ORTHO05D007138 5.7e-36 155.2 158 53.2
Sp1g05970 Schrenkiella parvula HOM05D005913 ORTHO05D007138 9.8e-36 154.5 158 55.1
C08p50760 Brassica napus HOM05D005913 ORTHO05D007138 1.7e-35 153.7 184 48.9
BolC8t52604H Brassica oleracea HOM05D005913 ORTHO05D007138 1.7e-35 153.7 184 48.9
Aa31LG1G6450 Aethionema arabicum HOM05D005913 ORTHO05D007138 2.2e-35 153.3 163 54.0
AL1G17350 Arabidopsis lyrata HOM05D005913 ORTHO05D007138 2.9e-35 152.9 158 52.5
A09p66580 Brassica napus HOM05D005913 ORTHO05D007138 3.7e-35 152.5 199 46.7
Carub.0001s0651 Capsella rubella HOM05D005913 ORTHO05D007138 6.4e-35 151.8 157 52.9
BcaC07g42020 Brassica carinata HOM05D005913 ORTHO05D007138 8.3e-35 151.4 184 48.4
BraA09t41996Z Brassica rapa HOM05D005913 ORTHO05D007138 8.3e-35 151.4 184 48.9
QL01p038500 Quercus lobata HOM05D005913 ORTHO05D007138 1.2e-33 147.5 185 49.2
Actinidia16099 Actinidia chinensis HOM05D005913 ORTHO05D007138 4.6e-33 145.6 186 48.9
Lj4A493T9 Lonicera japonica HOM05D005913 ORTHO05D007138 5.9e-33 145.2 219 45.7
unitig_26.g9973 Utricularia gibba HOM05D005913 ORTHO05D007138 1.3e-32 144.1 107 67.3
MD03G1068700 Malus domestica HOM05D005913 ORTHO05D007138 1.0e-29 134.4 81 82.7
SalBow6G3913 Salvia bowleyana HOM05D005913 ORTHO05D007138 5.2e-29 132.1 255 38.0
BcaC07g42451 Brassica carinata HOM05D005913 ORTHO05D007138 4.9e-27 125.6 87 71.3
BcaB07g33371 Brassica carinata HOM05D005913 ORTHO05D007138 3.2e-26 122.9 148 45.3
TPR.G37238 Trifolium pratense HOM05D005913 ORTHO05D007138 1.2e-25 120.9 172 46.5
Pp3c9_1670 Physcomitrium patens HOM05D005913 ORTHO05D007138 1.2e-22 110.9 140 46.4
Mapoly0046s0093 Marchantia polymorpha HOM05D005913 ORTHO05D007138 1.4e-21 107.5 198 38.4
AagrBONN_evm.TU.Sc2ySwM_362.942 Anthoceros agrestis HOM05D005913 ORTHO05D007138 2.0e-20 103.6 122 45.1
arahy.Tifrunner.gnm1.ann1.6CR394 Arachis hypogaea HOM05D005913 ORTHO05D007138 2.0e-20 103.6 81 65.4
TPR.G3936 Trifolium pratense HOM05D005913 ORTHO05D007138 2.0e-20 103.6 69 75.4
SEGI_23907 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 3.2e-18 96.3 133 45.1
SEGI_13957 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 8.6e-16 88.2 65 66.2
Atru.chr3.4201 Acer truncatum HOM05D005913 ORTHO05D007138 1.6e-14 84.0 151 37.7
TPR.G4738 Trifolium pratense HOM05D005913 ORTHO05D007138 1.6e-14 84.0 143 39.9
Peaxi162Scf00378g00212 Petunia axillaris HOM05D000011 ORTHO05D010520 8.1e-14 81.6 48 85.4
Solyc01g058530.4 Solanum lycopersicum HOM05D005913 ORTHO05D007138 8.1e-14 81.6 62 62.9
Atru.chr3.4202 Acer truncatum HOM05D005913 ORTHO05D007138 7.6e-12 75.1 56 75.0
CBR_g41534 Chara braunii HOM05D005913 ORTHO05D007138 3.2e-10 69.7 111 39.6


User provided reference genes

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