Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_002923 Vanilla planifolia HOM05D005085 ORTHO05D006135 5.4e-75 284.3 145 100.0
HPP92_028640 Vanilla planifolia HOM05D005085 ORTHO05D006135 1.2e-45 186.8 94 96.8
MBI06_g46249_MAGBIO Magnolia biondii HOM05D005085 ORTHO05D006135 1.6e-31 139.8 124 59.7
Nn3g18991 Nelumbo nucifera HOM05D005085 ORTHO05D006135 5.3e-30 134.8 118 61.9
Peaxi162Scf00717g00321 Petunia axillaris HOM05D005085 ORTHO05D006135 9.0e-30 134.0 110 65.5
CSS0012677 Camellia sinensis var. sinensis HOM05D005085 ORTHO05D006135 4.5e-29 131.7 122 59.8
COL.COLO4_16758 Corchorus olitorius HOM05D005085 ORTHO05D006135 9.9e-29 130.6 93 71.0
Haze_00215 Corylus avellana HOM05D005085 ORTHO05D006135 9.9e-29 130.6 119 58.8
Nn1g00241 Nelumbo nucifera HOM05D005085 ORTHO05D006135 1.3e-28 130.2 105 64.8
Prupe.2G310400 Prunus persica HOM05D005085 ORTHO05D006135 1.7e-28 129.8 117 58.1
GSVIVG01038548001 Vitis vinifera HOM05D005085 ORTHO05D006135 1.7e-28 129.8 86 75.6
Migut.F01031 Erythranthe guttata HOM05D005085 ORTHO05D006135 3.8e-28 128.6 124 58.1
MD07G1288900 Malus domestica HOM05D005085 ORTHO05D006135 6.4e-28 127.9 104 64.4
Lj1g0017393 Lotus japonicus HOM05D005085 ORTHO05D006135 8.4e-28 127.5 91 69.2
Gohir.1Z049319 Gossypium hirsutum HOM05D005085 ORTHO05D006135 1.1e-27 127.1 86 73.3
TAR375G0122 Trochodendron aralioides HOM05D005085 ORTHO05D006135 1.1e-27 127.1 121 56.2
CSS0032106 Camellia sinensis var. sinensis HOM05D005085 ORTHO05D006135 1.4e-27 126.7 122 58.2
Cpa.g.sc3.82 Carica papaya HOM05D005085 ORTHO05D006135 1.4e-27 126.7 103 66.0
Glyma.06G128600 Glycine max HOM05D005085 ORTHO05D006135 1.4e-27 126.7 103 64.1
Thecc.03G198500 Theobroma cacao HOM05D005085 ORTHO05D006135 1.4e-27 126.7 121 58.7
PSO135G0649 Papaver somniferum HOM05D005085 ORTHO05D006135 1.9e-27 126.3 91 69.2
Nitab4.5_0010146g0010 Nicotiana tabacum HOM05D005085 ORTHO05D006135 2.4e-27 125.9 100 67.0
Actinidia34217 Actinidia chinensis HOM05D005085 ORTHO05D006135 3.2e-27 125.6 117 59.0
MELO3C005886.2 Cucumis melo HOM05D005085 ORTHO05D006135 4.2e-27 125.2 91 64.8
SGA_v2.0_scaffold192G40551 Striga asiatica HOM05D005085 ORTHO05D006135 4.2e-27 125.2 122 55.7
CANSAT21G1132 Cannabis sativa HOM05D005085 ORTHO05D006135 5.5e-27 124.8 119 53.8
Nitab4.5_0005599g0010 Nicotiana tabacum HOM05D005085 ORTHO05D006135 5.5e-27 124.8 100 66.0
Duzib068G1071 Durio zibethinus HOM05D005085 ORTHO05D006135 9.3e-27 124.0 122 59.0
Hma1.2p1_0404F.1_g145430 Hydrangea macrophylla HOM05D005085 ORTHO05D006135 1.2e-26 123.6 122 57.4
PSO384G0679 Papaver somniferum HOM05D005085 ORTHO05D006135 1.2e-26 123.6 91 67.0
Sabra12G0017000 Salix brachista HOM05D005085 ORTHO05D006135 1.2e-26 123.6 93 66.7
Ah.07g205630 Amaranthus hybridus HOM05D005085 ORTHO05D006135 1.6e-26 123.2 93 64.5
ClCG01G000430 Citrullus lanatus HOM05D005085 ORTHO05D006135 1.6e-26 123.2 91 65.9
PGR142G4232 Punica granatum HOM05D005085 ORTHO05D006135 1.6e-26 123.2 120 54.2
Zm00001eb237090 Zea mays HOM05D005085 ORTHO05D006135 1.6e-26 123.2 84 67.9
CsaV3_5G000500 Cucumis sativus L. HOM05D005085 ORTHO05D006135 2.1e-26 122.9 91 63.7
Sc19g0000870 Simmondsia chinensis HOM05D005085 ORTHO05D006135 2.7e-26 122.5 87 70.1
Atru.chr12.2188 Acer truncatum HOM05D005085 ORTHO05D006135 4.6e-26 121.7 86 69.8
QL09p009347 Quercus lobata HOM05D005085 ORTHO05D006135 4.6e-26 121.7 119 53.8
Sabra15G0010900 Salix brachista HOM05D005085 ORTHO05D006135 4.6e-26 121.7 93 66.7
ATR0602G298 Amborella trichopoda HOM05D005085 ORTHO05D006135 6.0e-26 121.3 86 68.6
Eucgr.K00374 Eucalyptus grandis HOM05D005085 ORTHO05D006135 7.9e-26 120.9 86 67.4
Lju170A22T15 Lonicera japonica HOM05D005085 ORTHO05D006135 7.9e-26 120.9 123 55.3
FAN03G3191 Fragaria x ananassa HOM05D005085 ORTHO05D006135 1.0e-25 120.6 119 56.3
HanXRQChr04g0100521 Helianthus annuus HOM05D005085 ORTHO05D006135 1.0e-25 120.6 86 67.4
Hund11663 Selenicereus undatus HOM05D005085 ORTHO05D006135 1.0e-25 120.6 90 65.6
DCAR_008919 Daucus carota HOM05D005085 ORTHO05D006135 1.3e-25 120.2 94 63.8
Potri.012G014900 Populus trichocarpa HOM05D005085 ORTHO05D006135 1.3e-25 120.2 93 64.5
Sed0021974 Sechium edule HOM05D005085 ORTHO05D006135 1.3e-25 120.2 91 63.7
CDE04G2343 Ceratophyllum demersum HOM05D005085 ORTHO05D006135 1.8e-25 119.8 97 59.8
Pp3c3_30620 Physcomitrium patens HOM05D005085 ORTHO05D006135 1.8e-25 119.8 86 64.0
Potri.015G013400 Populus trichocarpa HOM05D005085 ORTHO05D006135 1.8e-25 119.8 93 65.6
EL10Ac3g05287 Beta vulgaris HOM05D005085 ORTHO05D006135 2.3e-25 119.4 93 63.4
FvH4_7g31630 Fragaria vesca HOM05D005085 ORTHO05D006135 2.3e-25 119.4 119 55.5
FAN06G1404 Fragaria x ananassa HOM05D005085 ORTHO05D006135 2.3e-25 119.4 119 55.5
FAN06G4927 Fragaria x ananassa HOM05D005085 ORTHO05D006135 2.3e-25 119.4 119 55.5
Actinidia08648 Actinidia chinensis HOM05D005085 ORTHO05D006135 3.0e-25 119.0 122 54.9
FAN10G0692 Fragaria x ananassa HOM05D005085 ORTHO05D006135 3.0e-25 119.0 119 55.5
FAN10G4178 Fragaria x ananassa HOM05D005085 ORTHO05D006135 3.0e-25 119.0 119 55.5
Solyc03g083330.3 Solanum lycopersicum HOM05D005085 ORTHO05D006135 6.7e-25 117.9 105 61.9
Sopen03g023080 Solanum pennellii HOM05D005085 ORTHO05D006135 6.7e-25 117.9 105 61.9
RcHm_v2.0_Chr1g0380701 Rosa chinensis HOM05D005085 ORTHO05D006135 8.7e-25 117.5 104 62.5
TWI23G0498 Tripterygium wilfordii HOM05D005085 ORTHO05D006135 8.7e-25 117.5 86 68.6
Pp3c8_9480 Physcomitrium patens HOM05D005085 ORTHO05D006135 1.1e-24 117.1 86 64.0
FAN01G1488 Fragaria x ananassa HOM05D005085 ORTHO05D006135 1.5e-24 116.7 119 54.6
Lsat_1_v5_gn_2_136081 Lactuca sativa HOM05D005085 ORTHO05D006135 1.5e-24 116.7 86 65.1
Sp2g23110 Schrenkiella parvula HOM05D005085 ORTHO05D006135 1.5e-24 116.7 86 66.3
Carub.0006s2201 Capsella rubella HOM05D005085 ORTHO05D006135 1.9e-24 116.3 86 66.3
Ciclev10018947m.g Citrus clementina HOM05D005085 ORTHO05D006135 2.5e-24 115.9 121 54.5
Mapoly0005s0073 Marchantia polymorpha HOM05D005085 ORTHO05D006135 2.5e-24 115.9 91 59.3
PGSC0003DMG400009126 Solanum tuberosum HOM05D005085 ORTHO05D006135 2.5e-24 115.9 100 63.0
CiPaw.05G196500 Carya illinoinensis HOM05D005085 ORTHO05D006135 3.3e-24 115.5 86 67.4
Cc02_g01600 Coffea canephora HOM05D005085 ORTHO05D006135 3.3e-24 115.5 86 65.1
Oeu037073.1 Olea europaea HOM05D005085 ORTHO05D006135 3.3e-24 115.5 88 65.9
VMungo1309G2271 Vigna mungo HOM05D005085 ORTHO05D006135 4.3e-24 115.2 103 59.2
Aa31LG11G3490 Aethionema arabicum HOM05D005085 ORTHO05D006135 5.6e-24 114.8 99 60.6
Phvul.009G052800 Phaseolus vulgaris HOM05D005085 ORTHO05D006135 5.6e-24 114.8 103 57.3
BcaB04g19831 Brassica carinata HOM05D005085 ORTHO05D006135 9.6e-24 114.0 99 60.6
BcaC04g23536 Brassica carinata HOM05D005085 ORTHO05D006135 9.6e-24 114.0 86 65.1
A09p06550 Brassica napus HOM05D005085 ORTHO05D006135 9.6e-24 114.0 86 65.1
C09p07310 Brassica napus HOM05D005085 ORTHO05D006135 9.6e-24 114.0 86 65.1
BolC9t53643H Brassica oleracea HOM05D005085 ORTHO05D006135 9.6e-24 114.0 86 65.1
BraA09t36300Z Brassica rapa HOM05D005085 ORTHO05D006135 9.6e-24 114.0 86 65.1
AT5G24260 Arabidopsis thaliana HOM05D005085 ORTHO05D006135 1.3e-23 113.6 86 65.1
AL6G35670 Arabidopsis lyrata HOM05D005085 ORTHO05D006135 2.1e-23 112.8 86 64.0
Ca_16704_v3 Cicer arietinum L. HOM05D005085 ORTHO05D006135 2.1e-23 112.8 91 61.5
MSTRG.27029 Avicennia marina HOM05D005085 ORTHO05D006135 2.8e-23 112.5 86 65.1
CAN.G968.3 Capsicum annuum HOM05D005085 ORTHO05D006135 2.8e-23 112.5 86 66.3
CARHR189270 Cardamine hirsuta HOM05D005085 ORTHO05D006135 4.8e-23 111.7 86 64.0
SMO334G0022 Selaginella moellendorffii HOM05D005085 ORTHO05D006135 6.2e-23 111.3 93 58.1
Oeu060983.2 Olea europaea HOM05D005085 ORTHO05D006135 1.4e-22 110.2 86 67.4
Oeu060984.1 Olea europaea HOM05D005085 ORTHO05D006135 1.4e-22 110.2 86 67.4
arahy.Tifrunner.gnm1.ann1.T9I2S7 Arachis hypogaea HOM05D005085 ORTHO05D006135 1.8e-22 109.8 105 55.2
arahy.Tifrunner.gnm1.ann1.ZR5QI2 Arachis hypogaea HOM05D005085 ORTHO05D006135 1.8e-22 109.8 105 55.2
Rhsim03G0208500 Rhododendron simsii HOM05D005085 ORTHO05D006135 4.0e-22 108.6 116 50.9
TAR629G3137 Trochodendron aralioides HOM05D005085 ORTHO05D006135 4.0e-22 108.6 92 64.1
ECA238G3029 Erigeron canadensis HOM05D005085 ORTHO05D006135 6.9e-22 107.8 86 58.1
Cfa016227 Carpinus fangiana HOM05D005085 ORTHO05D006135 9.0e-22 107.5 119 50.4
Thhalv10003701m.g Eutrema salsugineum HOM05D005085 ORTHO05D006135 1.5e-21 106.7 86 61.6
Psat5g078640 Pisum sativum HOM05D005085 ORTHO05D006135 2.0e-21 106.3 104 55.8
SalBow4G0231 Salvia bowleyana HOM05D005085 ORTHO05D006135 1.0e-20 104.0 104 55.8
vmacro06534 Vaccinium macrocarpon HOM05D005085 ORTHO05D006135 1.3e-20 103.6 117 49.6
Medtr3g091420 Medicago truncatula HOM05D005085 ORTHO05D006135 2.2e-20 102.8 91 58.2
TPR.G19373 Trifolium pratense HOM05D005085 ORTHO05D006135 2.2e-20 102.8 91 58.2
Aqoxy7G00083 Aquilegia oxysepala HOM05D005085 ORTHO05D006135 2.9e-20 102.4 84 61.9
Lalb_Chr08g0240261 Lupinus albus HOM05D005085 ORTHO05D006135 4.9e-20 101.7 93 55.9
THA.LOC104814927 Tarenaya hassleriana HOM05D005085 ORTHO05D006135 4.9e-20 101.7 86 60.5
Gohir.A05G414800 Gossypium hirsutum HOM05D005085 ORTHO05D006135 3.2e-19 99.0 86 62.8
Sed0008428 Sechium edule HOM05D005085 ORTHO05D006135 1.2e-18 97.1 81 54.3
SEGI_01874 Sequoiadendron giganteum HOM05D005085 ORTHO05D006135 6.0e-18 94.7 84 53.6
Migut.F00216 Erythranthe guttata HOM05D005085 ORTHO05D006135 3.9e-17 92.0 88 55.7
SEGI_15573 Sequoiadendron giganteum HOM05D005085 ORTHO05D006135 5.7e-16 88.2 86 52.3
SEGI_31502 Sequoiadendron giganteum HOM05D005085 ORTHO05D006135 5.7e-16 88.2 86 52.3
MBI06_g41630_MAGBIO Magnolia biondii HOM05D005085 ORTHO05D006135 9.7e-16 87.4 60 70.0
Lj1C1017G3 Lonicera japonica HOM05D005085 ORTHO05D006135 2.4e-14 82.8 76 53.9
Manes.01G183000 Manihot esculenta HOM05D005085 ORTHO05D006135 1.2e-13 80.5 91 51.6
PRCOL_00001990 Prasinoderma coloniale HOM05D005085 ORTHO05D006135 2.0e-13 79.7 88 46.6
AUR62019399 Chenopodium quinoa HOM05D005085 ORTHO05D006135 3.8e-12 75.5 127 33.9
Duzib205G0228 Durio zibethinus HOM05D005085 ORTHO05D006135 1.2e-10 70.5 53 67.9
Lj1A1019T47 Lonicera japonica HOM05D005085 ORTHO05D006135 4.6e-10 68.6 59 59.3
Dinv35331 Davidia involucrata HOM05D005085 ORTHO05D006135 1.1e-08 63.9 45 73.3
Ah.03g137970 Amaranthus hybridus HOM05D005085 ORTHO05D006135 2.8e-07 59.3 93 38.7


User provided reference genes

Program Settings