Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_002889 Vanilla planifolia HOM05D006315 ORTHO05D008052 1.4e-26 122.1 56 100.0
MBI01_g44539_MAGBIO Magnolia biondii HOM05D006315 ORTHO05D008052 1.5e-09 65.5 34 85.3
Zm00001eb377150 Zea mays HOM05D006315 ORTHO05D008052 7.5e-09 63.2 33 84.8
GSVIVG01000051001 Vitis vinifera HOM05D006315 ORTHO05D008052 2.2e-08 61.6 49 61.2
TAR381G0108 Trochodendron aralioides HOM05D006315 ORTHO05D008052 3.7e-08 60.8 49 59.2
Cc02_g33440 Coffea canephora HOM05D006315 ORTHO05D008052 6.4e-08 60.1 51 54.9
Sc06g0003310 Simmondsia chinensis HOM05D006315 ORTHO05D008052 6.4e-08 60.1 50 56.0
ATR1120G073 Amborella trichopoda HOM05D006315 ORTHO05D008052 8.3e-08 59.7 34 70.6
Eucgr.B01969 Eucalyptus grandis HOM05D006315 ORTHO05D008052 8.3e-08 59.7 51 54.9
Solyc01g098990.4 Solanum lycopersicum HOM05D006315 ORTHO05D008052 8.3e-08 59.7 51 56.9
Sopen01g042560 Solanum pennellii HOM05D006315 ORTHO05D008052 8.3e-08 59.7 51 56.9
PGSC0003DMG400018995 Solanum tuberosum HOM05D006315 ORTHO05D008052 8.3e-08 59.7 51 56.9
Nn6g32180 Nelumbo nucifera HOM05D006315 ORTHO05D008052 1.1e-07 59.3 34 76.5
QL03p006996 Quercus lobata HOM05D006315 ORTHO05D008052 1.1e-07 59.3 53 52.8
Aa31LG11G9300 Aethionema arabicum HOM05D006315 ORTHO05D008052 1.4e-07 58.9 51 54.9
Aqoxy6G00442 Aquilegia oxysepala HOM05D006315 ORTHO05D008052 1.4e-07 58.9 51 54.9
Cpa.g.sc48.53 Carica papaya HOM05D006315 ORTHO05D008052 1.4e-07 58.9 51 56.9
Eucgr.B01875 Eucalyptus grandis HOM05D006315 ORTHO05D008052 1.4e-07 58.9 51 54.9
Oeu020852.1 Olea europaea HOM05D006315 ORTHO05D008052 1.4e-07 58.9 34 76.5
Eucgr.B01970 Eucalyptus grandis HOM05D006315 ORTHO05D008052 1.9e-07 58.5 51 52.9
PSO541G4223 Papaver somniferum HOM05D006315 ORTHO05D008052 2.4e-07 58.2 34 73.5
PSO675G8687 Papaver somniferum HOM05D006315 ORTHO05D008052 2.4e-07 58.2 34 73.5
RhsimUnG0225800 Rhododendron simsii HOM05D006315 ORTHO05D008052 2.4e-07 58.2 34 76.5
vmacro05019 Vaccinium macrocarpon HOM05D006315 ORTHO05D008052 2.4e-07 58.2 34 76.5
Dinv40287 Davidia involucrata HOM05D006315 ORTHO05D008052 3.2e-07 57.8 33 75.8
Phvul.007G180000 Phaseolus vulgaris HOM05D006315 ORTHO05D008052 3.2e-07 57.8 51 56.9
CAN.G1034.11 Capsicum annuum HOM05D006315 ORTHO05D008052 4.1e-07 57.4 51 54.9
CiPaw.07G017800 Carya illinoinensis HOM05D006315 ORTHO05D008052 4.1e-07 57.4 34 76.5
HanXRQChr02g0046151 Helianthus annuus HOM05D006315 ORTHO05D008052 4.1e-07 57.4 34 70.6
Manes.09G167100 Manihot esculenta HOM05D006315 ORTHO05D008052 4.1e-07 57.4 51 52.9
A09p05350 Brassica napus HOM05D006315 ORTHO05D008052 5.4e-07 57.0 50 54.0
C09p05830 Brassica napus HOM05D006315 ORTHO05D008052 5.4e-07 57.0 50 54.0
BolC9t53510H Brassica oleracea HOM05D006315 ORTHO05D008052 5.4e-07 57.0 50 54.0
BraA09t36173Z Brassica rapa HOM05D006315 ORTHO05D008052 5.4e-07 57.0 50 54.0
Actinidia05703 Actinidia chinensis HOM05D006315 ORTHO05D008052 7.0e-07 56.6 34 73.5
Ciclev10001688m.g Citrus clementina HOM05D006315 ORTHO05D008052 7.0e-07 56.6 34 73.5
Nitab4.5_0000137g0320 Nicotiana tabacum HOM05D006315 ORTHO05D008052 7.0e-07 56.6 34 73.5
Nitab4.5_0004395g0040 Nicotiana tabacum HOM05D006315 ORTHO05D008052 7.0e-07 56.6 34 73.5
Peaxi162Scf00037g00325 Petunia axillaris HOM05D006315 ORTHO05D008052 7.0e-07 56.6 51 54.9
CDE06G2073 Ceratophyllum demersum HOM05D006315 ORTHO05D008052 9.2e-07 56.2 51 54.9
Sp2g20750 Schrenkiella parvula HOM05D006315 ORTHO05D008052 9.2e-07 56.2 51 52.9
CSS0039769 Camellia sinensis var. sinensis HOM05D006315 ORTHO05D008052 1.2e-06 55.8 34 73.5
AUR62005146 Chenopodium quinoa HOM05D006315 ORTHO05D008052 1.2e-06 55.8 50 56.0
Potri.013G020800 Populus trichocarpa HOM05D006315 ORTHO05D008052 1.2e-06 55.8 34 70.6
ClCG02G015800 Citrullus lanatus HOM05D006315 ORTHO05D008052 1.6e-06 55.5 34 73.5
CsaV3_2G005300 Cucumis sativus L. HOM05D006315 ORTHO05D008052 1.6e-06 55.5 34 73.5
Sed0013855 Sechium edule HOM05D006315 ORTHO05D008052 1.6e-06 55.5 34 73.5
MELO3C004257.2 Cucumis melo HOM05D006315 ORTHO05D008052 2.1e-06 55.1 34 70.6
AUR62000828 Chenopodium quinoa HOM05D006315 ORTHO05D008052 2.7e-06 54.7 33 72.7
Ca_10111_v3 Cicer arietinum L. HOM05D006315 ORTHO05D008052 2.7e-06 54.7 38 63.2
COL.COLO4_13471 Corchorus olitorius HOM05D006315 ORTHO05D008052 2.7e-06 54.7 34 70.6
ECA236G1566 Erigeron canadensis HOM05D006315 ORTHO05D008052 2.7e-06 54.7 49 53.1
Thecc.05G303200 Theobroma cacao HOM05D006315 ORTHO05D008052 2.7e-06 54.7 34 70.6
TWI36G1375 Tripterygium wilfordii HOM05D006315 ORTHO05D008052 2.7e-06 54.7 34 70.6
Duzib128G1131 Durio zibethinus HOM05D006315 ORTHO05D008052 3.5e-06 54.3 34 67.6
Thhalv10004542m.g Eutrema salsugineum HOM05D006315 ORTHO05D008052 3.5e-06 54.3 51 51.0
Lj5C470G0 Lonicera japonica HOM05D006315 ORTHO05D008052 3.5e-06 54.3 33 72.7
Lj5C532G5 Lonicera japonica HOM05D006315 ORTHO05D008052 3.5e-06 54.3 33 72.7
Atru.chr2.406 Acer truncatum HOM05D006315 ORTHO05D008052 4.6e-06 53.9 51 49.0
MD12G1219300 Malus domestica HOM05D006315 ORTHO05D008052 4.6e-06 53.9 34 67.6
Psat6g151200 Pisum sativum HOM05D006315 ORTHO05D008052 4.6e-06 53.9 38 65.8
CARHR186120 Cardamine hirsuta HOM05D006315 ORTHO05D008052 6.0e-06 53.5 51 51.0
Gohir.A11G265000 Gossypium hirsutum HOM05D006315 ORTHO05D008052 6.0e-06 53.5 51 51.0
Lalb_Chr02g0148251 Lupinus albus HOM05D006315 ORTHO05D008052 6.0e-06 53.5 34 70.6
Medtr1g082900 Medicago truncatula HOM05D006315 ORTHO05D008052 6.0e-06 53.5 34 67.6
Hund07070 Selenicereus undatus HOM05D006315 ORTHO05D008052 6.0e-06 53.5 51 52.9
VMungo0720G2927 Vigna mungo HOM05D006315 ORTHO05D008052 6.0e-06 53.5 34 73.5
FAN02G1008 Fragaria x ananassa HOM05D006315 ORTHO05D008052 7.8e-06 53.1 40 60.0
RcHm_v2.0_Chr3g0454751 Rosa chinensis HOM05D006315 ORTHO05D008052 7.8e-06 53.1 40 60.0
TPR.G6112 Trifolium pratense HOM05D006315 ORTHO05D008052 7.8e-06 53.1 38 63.2


User provided reference genes

Program Settings