Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_002885 Vanilla planifolia HOM05D005917 ORTHO05D007517 1.4e-293 1012.3 528 100.0
HPP92_002896 Vanilla planifolia HOM05D005917 ORTHO05D007517 7.2e-287 989.9 528 98.1
MBI16_g11554_MAGBIO Magnolia biondii HOM05D005917 ORTHO05D007517 1.1e-173 614.0 532 63.7
Sc21g0000840 Simmondsia chinensis HOM05D005917 ORTHO05D007517 3.5e-172 609.0 530 62.5
Hma1.2p1_0405F.1_g145810 Hydrangea macrophylla HOM05D005917 ORTHO05D007517 4.5e-172 608.6 529 61.6
TAR624G1058 Trochodendron aralioides HOM05D005917 ORTHO05D007517 2.3e-171 606.3 540 62.6
Aqoxy1G02033 Aquilegia oxysepala HOM05D005917 ORTHO05D007517 2.9e-171 605.9 529 63.9
Manes.13G063400 Manihot esculenta HOM05D005917 ORTHO05D007517 5.0e-171 605.1 534 62.5
Nn1g08522 Nelumbo nucifera HOM05D005917 ORTHO05D007517 8.6e-171 604.4 531 63.8
Gohir.A11G150200 Gossypium hirsutum HOM05D005917 ORTHO05D007517 1.6e-169 600.1 537 62.8
Thecc.01G189700 Theobroma cacao HOM05D005917 ORTHO05D007517 3.6e-169 599.0 538 61.7
Gorai.007G167200 Gossypium raimondii HOM05D005917 ORTHO05D007517 1.4e-168 597.0 537 62.6
Gohir.D11G156700 Gossypium hirsutum HOM05D005917 ORTHO05D007517 1.8e-168 596.7 538 62.5
vmacro12107 Vaccinium macrocarpon HOM05D005917 ORTHO05D007517 1.5e-167 593.6 531 62.5
Duzib133G0758 Durio zibethinus HOM05D005917 ORTHO05D007517 2.6e-167 592.8 533 61.5
PGSC0003DMG400006133 Solanum tuberosum HOM05D005917 ORTHO05D007517 3.4e-167 592.4 535 60.9
Cc02_g11180 Coffea canephora HOM05D005917 ORTHO05D007517 9.8e-167 590.9 545 60.7
Sopen07g024410 Solanum pennellii HOM05D005917 ORTHO05D007517 2.8e-166 589.3 535 60.7
PGR042G1386 Punica granatum HOM05D005917 ORTHO05D007517 8.3e-166 587.8 532 61.5
CAN.G854.3 Capsicum annuum HOM05D005917 ORTHO05D007517 1.1e-165 587.4 533 61.5
COL.COLO4_33026 Corchorus olitorius HOM05D005917 ORTHO05D007517 7.0e-165 584.7 538 61.7
CsaV3_7G002690 Cucumis sativus L. HOM05D005917 ORTHO05D007517 1.2e-164 583.9 538 61.9
Nitab4.5_0000441g0160 Nicotiana tabacum HOM05D005917 ORTHO05D007517 1.6e-164 583.6 538 60.8
Solyc07g047980.3 Solanum lycopersicum HOM05D005917 ORTHO05D007517 1.6e-164 583.6 535 60.4
Rhsim06G0173900 Rhododendron simsii HOM05D005917 ORTHO05D007517 4.5e-164 582.0 536 61.4
PSO700G0235 Papaver somniferum HOM05D005917 ORTHO05D007517 1.3e-163 580.5 527 61.7
Potri.002G222100 Populus trichocarpa HOM05D005917 ORTHO05D007517 1.3e-163 580.5 535 60.4
Lsat_1_v5_gn_7_96161 Lactuca sativa HOM05D005917 ORTHO05D007517 2.3e-163 579.7 539 60.7
Sabra02G0169500 Salix brachista HOM05D005917 ORTHO05D007517 2.9e-163 579.3 535 60.9
QL08p028769 Quercus lobata HOM05D005917 ORTHO05D007517 5.0e-163 578.6 534 60.9
ClCG02G002680 Citrullus lanatus HOM05D005917 ORTHO05D007517 6.6e-163 578.2 533 61.2
Nitab4.5_0005699g0010 Nicotiana tabacum HOM05D005917 ORTHO05D007517 6.6e-163 578.2 536 60.1
Peaxi162Scf00776g00033 Petunia axillaris HOM05D005917 ORTHO05D007517 8.6e-163 577.8 531 60.6
PSO761G0708 Papaver somniferum HOM05D005917 ORTHO05D007517 1.5e-162 577.0 527 61.1
Lj1P791T65 Lonicera japonica HOM05D005917 ORTHO05D007517 2.5e-162 576.2 533 60.4
TWI36G1171 Tripterygium wilfordii HOM05D005917 ORTHO05D007517 3.3e-162 575.9 526 61.6
Glyma.14G006700 Glycine max HOM05D005917 ORTHO05D007517 1.6e-161 573.5 529 60.7
Ca_06463_v3 Cicer arietinum L. HOM05D005917 ORTHO05D007517 4.7e-161 572.0 531 60.1
MSTRG.14928 Avicennia marina HOM05D005917 ORTHO05D007517 8.0e-161 571.2 542 59.6
TWI18G0259 Tripterygium wilfordii HOM05D005917 ORTHO05D007517 8.0e-161 571.2 529 60.7
ECA236G4414 Erigeron canadensis HOM05D005917 ORTHO05D007517 1.0e-160 570.9 540 61.1
CiPaw.04G195700 Carya illinoinensis HOM05D005917 ORTHO05D007517 1.8e-160 570.1 535 59.3
Sed0016848 Sechium edule HOM05D005917 ORTHO05D007517 1.8e-160 570.1 536 61.8
EL10Ac9g22738 Beta vulgaris HOM05D005917 ORTHO05D007517 2.3e-160 569.7 530 60.9
Cpa.g.sc136.15 Carica papaya HOM05D005917 ORTHO05D007517 3.1e-160 569.3 533 60.4
arahy.Tifrunner.gnm1.ann1.V8M1HU Arachis hypogaea HOM05D005917 ORTHO05D007517 1.2e-159 567.4 534 61.8
Eucgr.K00656 Eucalyptus grandis HOM05D005917 ORTHO05D007517 1.2e-159 567.4 530 61.3
SalBow2G2149 Salvia bowleyana HOM05D005917 ORTHO05D007517 1.5e-159 567.0 533 60.2
SalBow2G0814 Salvia bowleyana HOM05D005917 ORTHO05D007517 2.0e-159 566.6 540 59.8
Glyma.02G306400 Glycine max HOM05D005917 ORTHO05D007517 4.4e-159 565.5 531 60.5
CDE02G0007 Ceratophyllum demersum HOM05D005917 ORTHO05D007517 9.8e-159 564.3 508 62.2
TPR.G15058 Trifolium pratense HOM05D005917 ORTHO05D007517 9.8e-159 564.3 531 59.5
Ah.14g082780 Amaranthus hybridus HOM05D005917 ORTHO05D007517 1.3e-158 563.9 528 59.8
Lalb_Chr17g0349121 Lupinus albus HOM05D005917 ORTHO05D007517 1.7e-158 563.5 537 60.0
Cfa014247 Carpinus fangiana HOM05D005917 ORTHO05D007517 2.9e-158 562.8 532 59.8
SGA_v2.0_scaffold302G47853 Striga asiatica HOM05D005917 ORTHO05D000086 2.9e-158 562.8 529 62.0
arahy.Tifrunner.gnm1.ann1.410RPC Arachis hypogaea HOM05D005917 ORTHO05D007517 1.1e-157 560.8 527 62.0
DCAR_019712 Daucus carota HOM05D005917 ORTHO05D007517 1.1e-157 560.8 538 57.8
Psat0s736g0080 Pisum sativum HOM05D005917 ORTHO05D007517 2.4e-157 559.7 530 59.4
Ciclev10014942m.g Citrus clementina HOM05D005917 ORTHO05D007517 3.2e-157 559.3 534 57.5
Medtr5g097510 Medicago truncatula HOM05D005917 ORTHO05D007517 7.0e-157 558.1 533 58.9
AUR62017525 Chenopodium quinoa HOM05D005917 ORTHO05D007517 1.6e-156 557.0 536 59.5
Oeu012341.1 Olea europaea HOM05D005917 ORTHO05D007517 2.0e-156 556.6 536 58.2
VMungo0647G1382 Vigna mungo HOM05D005917 ORTHO05D007517 2.7e-156 556.2 528 58.3
Haze_12696 Corylus avellana HOM05D005917 ORTHO05D007517 4.6e-156 555.4 523 60.4
TAR626G1403 Trochodendron aralioides HOM05D005917 ORTHO05D007517 4.6e-156 555.4 481 63.0
LjContig00081g0012334 Lotus japonicus HOM05D005917 ORTHO05D007517 7.8e-156 554.7 529 58.8
Dinv07857 Davidia involucrata HOM05D005917 ORTHO05D007517 1.0e-155 554.3 529 60.9
MD09G1121500 Malus domestica HOM05D005917 ORTHO05D007517 1.7e-155 553.5 530 59.6
HanXRQChr04g0126661 Helianthus annuus HOM05D005917 ORTHO05D007517 2.3e-155 553.1 531 59.9
Atru.chr6.3353 Acer truncatum HOM05D005917 ORTHO05D007517 3.9e-155 552.4 533 58.7
Prupe.3G202200 Prunus persica HOM05D005917 ORTHO05D007517 5.0e-155 552.0 537 59.4
THA.LOC104802624 Tarenaya hassleriana HOM05D005917 ORTHO05D007517 3.3e-154 549.3 535 57.8
Manes.12G062101 Manihot esculenta HOM05D005917 ORTHO05D007517 1.2e-153 547.4 524 58.4
Potri.014G164200 Populus trichocarpa HOM05D005917 ORTHO05D007517 3.6e-153 545.8 536 57.8
Thhalv10022183m.g Eutrema salsugineum HOM05D005917 ORTHO05D007517 6.2e-153 545.0 526 58.2
Phvul.008G286200 Phaseolus vulgaris HOM05D005917 ORTHO05D007517 6.2e-153 545.0 531 58.0
Aa31LG5G18370 Aethionema arabicum HOM05D005917 ORTHO05D007517 5.2e-152 542.0 540 56.9
AUR62015069 Chenopodium quinoa HOM05D005917 ORTHO05D007517 6.8e-152 541.6 483 61.5
Migut.M00025 Erythranthe guttata HOM05D005917 ORTHO05D007517 1.2e-151 540.8 535 58.1
FAN05G4769 Fragaria x ananassa HOM05D005917 ORTHO05D007517 2.0e-151 540.0 532 58.8
FAN14G0404 Fragaria x ananassa HOM05D005917 ORTHO05D007517 3.4e-151 539.3 533 58.9
FvH4_6g41230 Fragaria vesca HOM05D005917 ORTHO05D007517 1.3e-150 537.3 533 58.7
MD17G1112500 Malus domestica HOM05D005917 ORTHO05D007517 1.3e-150 537.3 536 58.0
FAN09G3123 Fragaria x ananassa HOM05D005917 ORTHO05D007517 1.7e-150 537.0 533 59.1
AL3G19160 Arabidopsis lyrata HOM05D005917 ORTHO05D007517 3.7e-150 535.8 526 57.0
Os06g0502900 Oryza sativa ssp. japonica HOM05D005917 ORTHO05D007517 6.4e-150 535.0 535 59.1
unitig_747.g21169 Utricularia gibba HOM05D005917 ORTHO05D007517 7.0e-149 531.6 536 56.9
AT3G07790 Arabidopsis thaliana HOM05D005917 ORTHO05D007517 1.2e-148 530.8 531 56.7
Sp3g06720 Schrenkiella parvula HOM05D005917 ORTHO05D007517 3.5e-148 529.3 518 56.6
CARHR082500 Cardamine hirsuta HOM05D005917 ORTHO05D007517 7.8e-148 528.1 534 56.2
SHI10119 Sapria himalayana HOM05D005917 ORTHO05D007517 1.7e-147 526.9 534 56.2
RcHm_v2.0_Chr2g0156781 Rosa chinensis HOM05D005917 ORTHO05D007517 1.9e-146 523.5 537 57.4
FAN02G4512 Fragaria x ananassa HOM05D005917 ORTHO05D007517 1.2e-145 520.8 531 57.4
BolC1t05532H Brassica oleracea HOM05D005917 ORTHO05D007517 7.5e-143 511.5 512 55.7
Carub.0003s0737 Capsella rubella HOM05D005917 ORTHO05D007517 7.5e-143 511.5 532 55.1
Zm00001eb209430 Zea mays HOM05D005917 ORTHO05D007517 1.9e-141 506.9 536 55.8
BcaC09g47947 Brassica carinata HOM05D005917 ORTHO05D007517 3.2e-141 506.1 515 55.7
Zm00001eb209420 Zea mays HOM05D005917 ORTHO05D007517 7.1e-141 505.0 536 55.4
BraA01t04362Z Brassica rapa HOM05D005917 ORTHO05D007517 9.2e-141 504.6 514 55.4
Actinidia09775 Actinidia chinensis HOM05D005917 ORTHO05D007517 1.3e-139 500.7 468 59.8
SEGI_07273 Sequoiadendron giganteum HOM05D005917 ORTHO05D007517 5.1e-139 498.8 546 55.1
Zm00001eb403830 Zea mays HOM05D005917 ORTHO05D007517 5.1e-139 498.8 539 55.1
C05p59510 Brassica napus HOM05D005917 ORTHO05D007517 1.1e-138 497.7 515 55.9
BolC5t34607H Brassica oleracea HOM05D005917 ORTHO05D007517 1.1e-138 497.7 515 55.7
BraA05t22776Z Brassica rapa HOM05D005917 ORTHO05D007517 2.1e-137 493.4 513 55.0
A05p40430 Brassica napus HOM05D005917 ORTHO05D007517 2.8e-137 493.0 513 55.4
BcaC05g29571 Brassica carinata HOM05D005917 ORTHO05D007517 3.6e-137 492.7 515 54.2
CSS0026358 Camellia sinensis var. sinensis HOM05D005917 ORTHO05D007517 2.4e-128 463.4 532 54.5
GSVIVG01030044001 Vitis vinifera HOM05D005917 ORTHO05D000188 1.5e-122 444.1 500 52.6
Mapoly0016s0028 Marchantia polymorpha HOM05D005917 ORTHO05D007517 2.5e-122 443.4 550 49.1
Pp3c5_28640 Physcomitrium patens HOM05D005917 ORTHO05D007517 7.3e-122 441.8 540 50.6
ATR0665G318 Amborella trichopoda HOM05D005917 ORTHO05D007517 3.4e-119 433.0 530 51.7
CDE09G1298 Ceratophyllum demersum HOM05D005917 ORTHO05D007517 1.1e-114 417.9 310 69.7
SMO347G0414 Selaginella moellendorffii HOM05D005917 ORTHO05D007517 1.0e-107 394.8 537 49.0
Manes.12G052600 Manihot esculenta HOM05D005917 ORTHO05D007517 1.6e-97 360.9 514 47.1
CBR_g39617 Chara braunii HOM05D005917 ORTHO05D007517 1.6e-92 344.4 583 40.8
Migut.L01336 Erythranthe guttata HOM05D005917 ORTHO05D007517 1.9e-85 320.9 525 42.7
MELO3C024210.2 Cucumis melo HOM05D005917 ORTHO05D007517 2.3e-75 287.3 311 56.3
HanXRQChr11g0328131 Helianthus annuus HOM05D005917 ORTHO05D007517 9.1e-56 222.2 293 46.8
AagrBONN_evm.TU.Sc2ySwM_344.1277 Anthoceros agrestis HOM05D005917 ORTHO05D007517 2.8e-49 200.7 351 39.6
Sed0013022 Sechium edule HOM05D005917 ORTHO05D007517 9.5e-45 185.7 207 55.6
TPR.G18819 Trifolium pratense HOM05D005917 ORTHO05D007517 2.1e-28 131.3 294 36.1
Cre11.g482050 Chlamydomonas reinhardtii HOM05D005917 ORTHO05D007517 3.7e-25 120.6 483 28.2
MCO15G396 Micromonas commoda HOM05D005917 ORTHO05D007517 4.6e-23 113.6 444 28.2
Manes.16G064350 Manihot esculenta HOM05D005917 ORTHO05D007517 9.9e-18 95.9 71 67.6
Prupe.3G225800 Prunus persica HOM05D005917 ORTHO05D007517 2.4e-16 91.3 107 52.3
CAN.G244.10 Capsicum annuum HOM05D000180 ORTHO05D000099 4.2e-16 90.5 59 67.8
FAN14G5926 Fragaria x ananassa HOM05D005917 ORTHO05D007517 4.3e-13 80.5 82 52.4
FAN02G4549 Fragaria x ananassa HOM05D005917 ORTHO05D007517 2.4e-11 74.7 53 58.5
Cfa024500 Carpinus fangiana HOM05D005917 ORTHO05D007517 3.4e-10 70.9 184 32.1
Nn6g32048 Nelumbo nucifera HOM05D005917 ORTHO05D007517 6.4e-09 66.6 49 73.5
Nn6g32049 Nelumbo nucifera HOM05D005917 ORTHO05D007517 1.9e-08 65.1 64 54.7


User provided reference genes

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