Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_002875 Vanilla planifolia HOM05D004175 ORTHO05D004664 4.6e-85 317.8 152 100.0
ATR0705G211 Amborella trichopoda HOM05D004175 ORTHO05D004664 1.9e-14 83.2 83 56.6
Hund26252 Selenicereus undatus HOM05D004175 ORTHO05D004664 6.8e-12 74.7 78 52.6
Nn8g39121 Nelumbo nucifera HOM05D004175 ORTHO05D004664 1.5e-11 73.6 84 48.8
Dinv36699 Davidia involucrata HOM05D004175 ORTHO05D004664 2.0e-11 73.2 96 45.8
Hund09241 Selenicereus undatus HOM05D004175 ORTHO05D004664 2.0e-11 73.2 78 51.3
TAR383G0226 Trochodendron aralioides HOM05D004175 ORTHO05D004664 2.6e-11 72.8 104 42.3
Manes.16G110500 Manihot esculenta HOM05D004175 ORTHO05D004664 7.5e-11 71.2 82 50.0
Zm00001eb204970 Zea mays HOM05D004175 ORTHO05D004664 1.3e-10 70.5 78 51.3
Actinidia09442 Actinidia chinensis HOM05D001936 ORTHO05D002296 2.2e-10 69.7 83 47.0
MBI04_g06580_MAGBIO Magnolia biondii HOM05D004175 ORTHO05D004664 2.2e-10 69.7 78 50.0
MBI04_g40471_MAGBIO Magnolia biondii HOM05D004175 ORTHO05D004664 2.2e-10 69.7 78 50.0
Aqoxy7G03896 Aquilegia oxysepala HOM05D004175 ORTHO05D004664 4.9e-10 68.6 84 44.0
CiPaw.03G226400 Carya illinoinensis HOM05D004175 ORTHO05D004664 8.3e-10 67.8 82 46.3
Nn2g11614 Nelumbo nucifera HOM05D004175 ORTHO05D004664 8.3e-10 67.8 107 40.2
RcHm_v2.0_Chr2g0091541 Rosa chinensis HOM05D004175 ORTHO05D004664 8.3e-10 67.8 82 46.3
Thecc.09G102700 Theobroma cacao HOM05D004175 ORTHO05D004664 8.3e-10 67.8 83 45.8
Oeu017825.1 Olea europaea HOM05D004175 ORTHO05D004664 1.1e-09 67.4 86 47.7
Os02g0230100 Oryza sativa ssp. japonica HOM05D004175 ORTHO05D004664 1.1e-09 67.4 96 44.8
Gohir.D13G201000 Gossypium hirsutum HOM05D004175 ORTHO05D004664 1.8e-09 66.6 83 45.8
Gorai.013G229800 Gossypium raimondii HOM05D004175 ORTHO05D004664 1.8e-09 66.6 83 45.8
Rhsim05G0041300 Rhododendron simsii HOM05D004175 ORTHO05D004664 1.8e-09 66.6 83 45.8
FvH4_1g05880 Fragaria vesca HOM05D004175 ORTHO05D004664 2.4e-09 66.2 86 43.0
FAN19G1571 Fragaria x ananassa HOM05D004175 ORTHO05D004664 2.4e-09 66.2 86 43.0
Gohir.A13G195800 Gossypium hirsutum HOM05D004175 ORTHO05D004664 2.4e-09 66.2 83 45.8
FAN26G0873 Fragaria x ananassa HOM05D004175 ORTHO05D004664 3.2e-09 65.9 86 43.0
FAN26G2762 Fragaria x ananassa HOM05D004175 ORTHO05D004664 3.2e-09 65.9 86 43.0
FAN28G2614 Fragaria x ananassa HOM05D004175 ORTHO05D004664 3.2e-09 65.9 86 43.0
ECA234G4006 Erigeron canadensis HOM05D004175 ORTHO05D004664 4.1e-09 65.5 81 43.2
vmacro10860 Vaccinium macrocarpon HOM05D004175 ORTHO05D004664 4.1e-09 65.5 82 46.3
Sp6g24700 Schrenkiella parvula HOM05D004175 ORTHO05D004664 5.4e-09 65.1 83 43.4
ClCG11G002240 Citrullus lanatus HOM05D004175 ORTHO05D004664 7.0e-09 64.7 103 39.8
Ah.14g083210 Amaranthus hybridus HOM05D004175 ORTHO05D004664 9.2e-09 64.3 78 53.8
FAN23G2598 Fragaria x ananassa HOM05D004175 ORTHO05D004664 9.2e-09 64.3 86 41.9
MD15G1194400 Malus domestica HOM05D004175 ORTHO05D004664 9.2e-09 64.3 79 45.6
Sc08g0007900 Simmondsia chinensis HOM05D004175 ORTHO05D004664 9.2e-09 64.3 78 47.4
Carub.0006s1803 Capsella rubella HOM05D004175 ORTHO05D004664 1.2e-08 63.9 83 44.6
Lj3g0019618 Lotus japonicus HOM05D004175 ORTHO05D004664 1.2e-08 63.9 85 42.4
GSVIVG01015319001 Vitis vinifera HOM05D004175 ORTHO05D004664 1.2e-08 63.9 82 43.9
Atru.chr7.1440 Acer truncatum HOM05D004175 ORTHO05D004664 1.6e-08 63.5 82 47.6
COL.COLO4_34774 Corchorus olitorius HOM05D004175 ORTHO05D004664 1.6e-08 63.5 83 44.6
RcHm_v2.0_Chr2g0091621 Rosa chinensis HOM05D004175 ORTHO05D004664 1.6e-08 63.5 75 46.7
CSS0007429 Camellia sinensis var. sinensis HOM05D004175 ORTHO05D004664 2.0e-08 63.2 83 45.8
CSS0045871 Camellia sinensis var. sinensis HOM05D004175 ORTHO05D004664 2.0e-08 63.2 83 45.8
Glyma.08G034700 Glycine max HOM05D004175 ORTHO05D004664 2.0e-08 63.2 85 43.5
Sed0003540 Sechium edule HOM05D004175 ORTHO05D004664 2.7e-08 62.8 78 44.9
CARHR193230 Cardamine hirsuta HOM05D004175 ORTHO05D004664 4.6e-08 62.0 83 41.0
DCAR_012049 Daucus carota HOM05D004175 ORTHO05D004664 4.6e-08 62.0 87 43.7
Lalb_Chr05g0223141 Lupinus albus HOM05D004175 ORTHO05D004664 4.6e-08 62.0 86 43.0
Medtr8g102770 Medicago truncatula HOM05D004175 ORTHO05D004664 4.6e-08 62.0 85 41.2
Prupe.7G222100 Prunus persica HOM05D004175 ORTHO05D004664 4.6e-08 62.0 82 41.5
AT5G19680 Arabidopsis thaliana HOM05D004175 ORTHO05D004664 5.9e-08 61.6 83 42.2
Cpa.g.sc40.51 Carica papaya HOM05D004175 ORTHO05D004664 5.9e-08 61.6 82 42.7
Ciclev10008855m.g Citrus clementina HOM05D004175 ORTHO05D004664 5.9e-08 61.6 82 42.7
CsaV3_2G001990 Cucumis sativus L. HOM05D004175 ORTHO05D004664 5.9e-08 61.6 78 42.3
Potri.018G086200 Populus trichocarpa HOM05D004175 ORTHO05D004664 5.9e-08 61.6 85 41.2
SGA_v2.0_scaffold10G05161 Striga asiatica HOM05D004175 ORTHO05D004664 5.9e-08 61.6 81 43.2
Duzib187G1630 Durio zibethinus HOM05D004175 ORTHO05D004664 7.8e-08 61.2 83 43.4
MD02G1060900 Malus domestica HOM05D004175 ORTHO05D004664 7.8e-08 61.2 82 41.5
Oeu000358.1 Olea europaea HOM05D004175 ORTHO05D004664 7.8e-08 61.2 81 43.2
PSO210G7624 Papaver somniferum HOM05D004175 ORTHO05D004664 7.8e-08 61.2 84 40.5
Peaxi162Scf00001g00131 Petunia axillaris HOM05D004175 ORTHO05D004664 7.8e-08 61.2 87 42.5
unitig_26.g8970 Utricularia gibba HOM05D004175 ORTHO05D004664 7.8e-08 61.2 85 42.4
Migut.J01107 Erythranthe guttata HOM05D004175 ORTHO05D004664 1.0e-07 60.8 81 43.2
Glyma.05G227700 Glycine max HOM05D004175 ORTHO05D004664 1.0e-07 60.8 85 42.4
SHI11434 Sapria himalayana HOM05D004175 ORTHO05D004664 1.0e-07 60.8 83 38.6
BcaC03g13699 Brassica carinata HOM05D004175 ORTHO05D004664 1.3e-07 60.5 83 39.8
BNapus_Darmor_BZH_scaffold_38p02220 Brassica napus HOM05D004175 ORTHO05D004664 1.3e-07 60.5 83 39.8
CDE02G1631 Ceratophyllum demersum HOM05D004175 ORTHO05D004664 1.3e-07 60.5 83 39.8
MELO3C004581.2 Cucumis melo HOM05D004175 ORTHO05D004664 1.3e-07 60.5 78 41.0
Gohir.A06G066500 Gossypium hirsutum HOM05D004175 ORTHO05D004664 1.3e-07 60.5 97 38.1
Lsat_1_v5_gn_5_143861 Lactuca sativa HOM05D004175 ORTHO05D004664 1.3e-07 60.5 81 39.5
PSO210G6864 Papaver somniferum HOM05D004175 ORTHO05D004664 1.3e-07 60.5 84 39.3
QL02p042164 Quercus lobata HOM05D004175 ORTHO05D004664 1.3e-07 60.5 78 44.9
Duzib168G0201 Durio zibethinus HOM05D004175 ORTHO05D004664 1.7e-07 60.1 83 43.4
ECA247G2452 Erigeron canadensis HOM05D004175 ORTHO05D004664 1.7e-07 60.1 85 40.0
HanXRQChr10g0318361 Helianthus annuus HOM05D004175 ORTHO05D004664 1.7e-07 60.1 81 39.5
Sabra18G0074500 Salix brachista HOM05D004175 ORTHO05D004664 1.7e-07 60.1 85 41.2
Sopen05g014800 Solanum pennellii HOM05D004175 ORTHO05D004664 1.7e-07 60.1 102 41.2
Eucgr.C03782 Eucalyptus grandis HOM05D004175 ORTHO05D004664 2.3e-07 59.7 78 44.9
CANSAT56G2035 Cannabis sativa HOM05D004175 ORTHO05D004664 3.0e-07 59.3 82 40.2
Cc06_g10300 Coffea canephora HOM05D004175 ORTHO05D004664 3.0e-07 59.3 81 43.2
THA.LOC104811087 Tarenaya hassleriana HOM05D004175 ORTHO05D004664 3.0e-07 59.3 83 41.0
TPR.G23501 Trifolium pratense HOM05D004175 ORTHO05D004664 3.0e-07 59.3 85 41.2
BcaB05g23410 Brassica carinata HOM05D004175 ORTHO05D004664 3.9e-07 58.9 83 41.0
A02p05730 Brassica napus HOM05D004175 ORTHO05D004664 3.9e-07 58.9 83 39.8
A10p20040 Brassica napus HOM05D004175 ORTHO05D004664 3.9e-07 58.9 83 39.8
BolC9t58515H Brassica oleracea HOM05D004175 ORTHO05D004664 3.9e-07 58.9 83 39.8
BraA02t05525Z Brassica rapa HOM05D004175 ORTHO05D004664 3.9e-07 58.9 83 39.8
BraA10t44078Z Brassica rapa HOM05D004175 ORTHO05D004664 3.9e-07 58.9 83 39.8
AUR62010918 Chenopodium quinoa HOM05D004175 ORTHO05D004664 3.9e-07 58.9 71 50.7
Gohir.D06G065000 Gossypium hirsutum HOM05D004175 ORTHO05D004664 3.9e-07 58.9 97 38.1
SEGI_33191 Sequoiadendron giganteum HOM05D004175 ORTHO05D004664 5.0e-07 58.5 84 42.9
EL10Ac8g18403 Beta vulgaris HOM05D004175 ORTHO05D004664 6.6e-07 58.2 78 47.4
Mapoly0051s0012 Marchantia polymorpha HOM05D004175 ORTHO05D004664 6.6e-07 58.2 78 41.0
Solyc05g018150.3 Solanum lycopersicum HOM05D004175 ORTHO05D004664 1.1e-06 57.4 102 40.2
VMungo0251G2778 Vigna mungo HOM05D004175 ORTHO05D004664 1.1e-06 57.4 85 38.8
Thhalv10014089m.g Eutrema salsugineum HOM05D004175 ORTHO05D004664 1.5e-06 57.0 83 41.0
AL6G31190 Arabidopsis lyrata HOM05D004175 ORTHO05D004664 1.9e-06 56.6 83 39.8
Nitab4.5_0000012g0030 Nicotiana tabacum HOM05D004175 ORTHO05D004664 1.9e-06 56.6 81 42.0
Nitab4.5_0003199g0020 Nicotiana tabacum HOM05D004175 ORTHO05D004664 1.9e-06 56.6 81 43.2
arahy.Tifrunner.gnm1.ann1.2Q2DTK Arachis hypogaea HOM05D004175 ORTHO05D004664 2.5e-06 56.2 85 38.8
arahy.Tifrunner.gnm1.ann1.5M1SBB Arachis hypogaea HOM05D004175 ORTHO05D004664 2.5e-06 56.2 85 38.8
BcaC04g19364 Brassica carinata HOM05D004175 ORTHO05D004664 3.3e-06 55.8 83 38.6
MSTRG.6019 Avicennia marina HOM05D004175 ORTHO05D004664 4.3e-06 55.5 81 42.0
Haze_25808 Corylus avellana HOM05D004175 ORTHO05D004664 5.6e-06 55.1 82 39.0
Psat7g016360 Pisum sativum HOM05D004175 ORTHO05D004664 5.6e-06 55.1 85 37.6
BcaC04g19365 Brassica carinata HOM05D004175 ORTHO05D004664 7.3e-06 54.7 83 37.3
C09p56500 Brassica napus HOM05D004175 ORTHO05D004664 7.3e-06 54.7 83 37.3


User provided reference genes

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