Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_002813 Vanilla planifolia HOM05D007575 ORTHO05D009611 3.2e-281 971.1 493 100.0
HPP92_002869 Vanilla planifolia HOM05D007575 ORTHO05D009611 1.1e-247 859.8 465 95.5
QL10p045159 Quercus lobata HOM05D007575 ORTHO05D009611 6.9e-90 335.5 546 40.8
Manes.11G115700 Manihot esculenta HOM05D007575 ORTHO05D009611 1.3e-88 331.3 554 39.4
Cfa015783 Carpinus fangiana HOM05D007575 ORTHO05D009611 1.7e-88 330.9 555 40.4
TAR633G2419 Trochodendron aralioides HOM05D007575 ORTHO05D009611 2.2e-88 330.5 539 42.1
Cc03_g13380 Coffea canephora HOM05D007575 ORTHO05D009611 4.2e-87 326.2 501 41.1
GSVIVG01013567001 Vitis vinifera HOM05D007575 ORTHO05D009611 4.2e-87 326.2 548 38.1
MD04G1038600 Malus domestica HOM05D007575 ORTHO05D009611 7.2e-87 325.5 536 39.0
CiPaw.01G103900 Carya illinoinensis HOM05D007575 ORTHO05D009611 2.1e-86 323.9 556 38.8
Thecc.04G183800 Theobroma cacao HOM05D007575 ORTHO05D009611 2.7e-86 323.6 536 39.2
CSS0031716 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 3.6e-86 323.2 585 37.6
MBI08_g10298_MAGBIO Magnolia biondii HOM05D007575 ORTHO05D009611 6.1e-86 322.4 605 38.2
Aa31LG1G25020 Aethionema arabicum HOM05D007575 ORTHO05D009611 3.9e-85 319.7 532 38.2
Haze_00711 Corylus avellana HOM05D007575 ORTHO05D009611 5.1e-85 319.3 555 39.8
Duzib151G0056 Durio zibethinus HOM05D007575 ORTHO05D009611 1.5e-84 317.8 531 37.5
Gohir.D10G131800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 4.3e-84 316.2 541 39.0
Gorai.011G145500 Gossypium raimondii HOM05D007575 ORTHO05D009611 2.2e-83 313.9 537 39.9
Rhsim09G0032600 Rhododendron simsii HOM05D007575 ORTHO05D009611 4.8e-83 312.8 551 39.4
Gohir.A10G134800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 3.1e-82 310.1 527 39.5
Sed0001943 Sechium edule HOM05D007575 ORTHO05D009611 4.1e-82 309.7 553 38.9
Sabra07G0100200 Salix brachista HOM05D007575 ORTHO05D009611 5.3e-82 309.3 546 37.5
Actinidia39859 Actinidia chinensis HOM05D007575 ORTHO05D009611 6.9e-82 308.9 569 37.1
SalBow6G5467 Salvia bowleyana HOM05D007575 ORTHO05D009611 9.1e-82 308.5 525 37.5
PGR083G2249 Punica granatum HOM05D007575 ORTHO05D009611 2.6e-81 307.0 519 37.8
Potri.017G036600 Populus trichocarpa HOM05D007575 ORTHO05D009611 5.9e-81 305.8 541 38.8
Ciclev10019508m.g Citrus clementina HOM05D007575 ORTHO05D009611 7.7e-81 305.4 573 37.3
Prupe.1G189300 Prunus persica HOM05D007575 ORTHO05D009611 1.7e-80 304.3 554 37.7
Nn1g09745 Nelumbo nucifera HOM05D007575 ORTHO05D009611 2.2e-80 303.9 568 35.6
THA.LOC104803562 Tarenaya hassleriana HOM05D007575 ORTHO05D009611 2.9e-80 303.5 549 37.0
Thhalv10001393m.g Eutrema salsugineum HOM05D007575 ORTHO05D009611 3.8e-80 303.1 532 39.3
Sp4g25330 Schrenkiella parvula HOM05D007575 ORTHO05D009611 1.4e-79 301.2 549 37.9
MELO3C011621.2 Cucumis melo HOM05D007575 ORTHO05D009611 2.5e-79 300.4 537 37.6
ClCG08G004240 Citrullus lanatus HOM05D007575 ORTHO05D009611 3.2e-79 300.1 539 39.5
ECA233G3130 Erigeron canadensis HOM05D007575 ORTHO05D009611 9.4e-79 298.5 505 38.4
Lsat_1_v5_gn_6_54841 Lactuca sativa HOM05D007575 ORTHO05D009611 1.6e-78 297.7 502 38.0
RcHm_v2.0_Chr4g0407361 Rosa chinensis HOM05D007575 ORTHO05D009611 1.6e-78 297.7 608 35.5
CsaV3_6G003720 Cucumis sativus L. HOM05D007575 ORTHO05D009611 2.1e-78 297.4 539 37.5
FAN17G1632 Fragaria x ananassa HOM05D007575 ORTHO05D009611 2.7e-78 297.0 605 35.2
Eucgr.A00245 Eucalyptus grandis HOM05D007575 ORTHO05D009611 3.6e-78 296.6 543 37.4
BraA04t18714Z Brassica rapa HOM05D001811 ORTHO05D001738 7.9e-78 295.4 510 39.6
CAN.G710.64 Capsicum annuum HOM05D007575 ORTHO05D009611 1.4e-77 294.7 537 35.4
Carub.0004s2568 Capsella rubella HOM05D007575 ORTHO05D009611 3.9e-77 293.1 535 37.4
Migut.N00470 Erythranthe guttata HOM05D007575 ORTHO05D009611 5.1e-77 292.7 540 37.6
C04p70190 Brassica napus HOM05D007575 ORTHO05D009611 8.8e-77 292.0 532 38.9
CANSAT78G0404 Cannabis sativa HOM05D007575 ORTHO05D009611 1.1e-76 291.6 537 37.6
Gorai.009G350900 Gossypium raimondii HOM05D007575 ORTHO05D009611 1.1e-76 291.6 540 36.7
FAN07G0850 Fragaria x ananassa HOM05D007575 ORTHO05D009611 2.6e-76 290.4 604 35.4
Gohir.D05G326300 Gossypium hirsutum HOM05D007575 ORTHO05D009611 3.3e-76 290.0 540 36.7
Oeu050351.1 Olea europaea HOM05D007575 ORTHO05D009611 3.3e-76 290.0 524 38.4
AL4G41870 Arabidopsis lyrata HOM05D007575 ORTHO05D009611 5.7e-76 289.3 537 37.8
HanXRQChr02g0057801 Helianthus annuus HOM05D007575 ORTHO05D009611 5.7e-76 289.3 529 38.0
FvH4_4g11270 Fragaria vesca HOM05D007575 ORTHO05D009611 7.4e-76 288.9 606 34.2
Sopen09g036470 Solanum pennellii HOM05D007575 ORTHO05D009611 1.3e-75 288.1 538 35.5
DCAR_027534 Daucus carota HOM05D007575 ORTHO05D009611 2.2e-75 287.3 529 36.5
Atru.chr3.1619 Acer truncatum HOM05D007575 ORTHO05D009611 4.8e-75 286.2 498 38.8
Gohir.A05G326900 Gossypium hirsutum HOM05D007575 ORTHO05D009611 1.1e-74 285.0 531 37.5
ATR0743G244 Amborella trichopoda HOM05D007575 ORTHO05D009611 3.1e-74 283.5 550 36.4
Actinidia11312 Actinidia chinensis HOM05D007575 ORTHO05D009611 4.1e-74 283.1 536 37.1
A04p32490 Brassica napus HOM05D007575 ORTHO05D009611 4.1e-74 283.1 565 36.5
MSTRG.24588 Avicennia marina HOM05D007575 ORTHO05D009611 5.3e-74 282.7 534 34.5
CDE09G0236 Ceratophyllum demersum HOM05D007575 ORTHO05D009611 1.5e-73 281.2 525 36.8
AT2G43210 Arabidopsis thaliana HOM05D007575 ORTHO05D009611 4.5e-73 279.6 541 36.0
Os11g0293900 Oryza sativa ssp. japonica HOM05D007575 ORTHO05D009611 4.5e-73 279.6 550 36.0
vmacro00586 Vaccinium macrocarpon HOM05D007575 ORTHO05D009611 9.4e-71 271.9 593 35.2
unitig_8.g3630 Utricularia gibba HOM05D007575 ORTHO05D009611 1.2e-70 271.6 548 36.1
Potri.007G123800 Populus trichocarpa HOM05D007575 ORTHO05D009611 4.7e-70 269.6 469 39.7
Sabra17G0024000 Salix brachista HOM05D007575 ORTHO05D009611 1.4e-69 268.1 587 34.1
Peaxi162Scf00286g00233 Petunia axillaris HOM05D007575 ORTHO05D009611 1.8e-69 267.7 532 35.7
SGA_v2.0_scaffold406G51053 Striga asiatica HOM05D007575 ORTHO05D009611 2.0e-68 264.2 539 34.1
Lj6A70T54 Lonicera japonica HOM05D007575 ORTHO05D009611 3.7e-67 260.0 648 32.6
FAN22G0659 Fragaria x ananassa HOM05D007575 ORTHO05D009611 2.4e-66 257.3 616 33.1
PSO210G6745 Papaver somniferum HOM05D007575 ORTHO05D009611 3.8e-64 250.0 552 34.4
Nitab4.5_0004962g0010 Nicotiana tabacum HOM05D007575 ORTHO05D009611 8.8e-61 238.8 464 35.3
COL.COLO4_24385 Corchorus olitorius HOM05D001792 ORTHO05D001821 4.8e-59 233.0 503 36.6
Nitab4.5_0001049g0060 Nicotiana tabacum HOM05D007575 ORTHO05D009611 8.3e-59 232.3 467 35.1
Solyc09g098550.4 Solanum lycopersicum HOM05D007575 ORTHO05D009611 2.4e-58 230.7 456 34.9
BcaNung07370 Brassica carinata HOM05D007575 ORTHO05D009611 9.1e-58 228.8 432 38.4
CARHR138270 Cardamine hirsuta HOM05D007575 ORTHO05D009611 9.1e-58 228.8 453 34.0
Lj6A61T39 Lonicera japonica HOM05D007575 ORTHO05D009611 2.0e-52 211.1 380 37.1
PSO832G0541 Papaver somniferum HOM05D007575 ORTHO05D009611 4.1e-50 203.4 467 32.8
Pp3c20_2320 Physcomitrium patens HOM05D007575 ORTHO05D009611 5.8e-36 156.4 541 28.8
Mapoly0164s0007 Marchantia polymorpha HOM05D007575 ORTHO05D009611 3.7e-35 153.7 430 27.0
Zm00001eb198990 Zea mays HOM05D007575 ORTHO05D009611 4.9e-35 153.3 226 43.4
SEGI_13760 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 2.4e-34 151.0 421 29.7
AagrBONN_evm.TU.Sc2ySwM_344.3290 Anthoceros agrestis HOM05D007575 ORTHO05D009611 9.5e-31 139.0 402 28.4
Hma1.2p1_1477F.1_g285910 Hydrangea macrophylla HOM05D007575 ORTHO05D009611 1.1e-29 135.6 263 36.5
TAR633G1182 Trochodendron aralioides HOM05D007575 ORTHO05D009611 6.4e-27 126.3 170 44.1
SMO116G0403 Selaginella moellendorffii HOM05D007575 ORTHO05D009611 6.0e-25 119.8 515 24.9
SalBow5G2148 Salvia bowleyana HOM05D007575 ORTHO05D009611 3.0e-24 117.5 168 39.9
SalBow5G4021 Salvia bowleyana HOM05D007575 ORTHO05D009611 3.0e-24 117.5 168 39.9
BcaB06g29288 Brassica carinata HOM05D007575 ORTHO05D009611 9.5e-23 112.5 132 40.9
Eucgr.A00051 Eucalyptus grandis HOM05D007575 ORTHO05D009611 6.2e-22 109.8 171 43.9
SEGI_03248 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 2.0e-20 104.8 167 41.3
CSS0007449 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 3.0e-16 90.9 361 26.6
Lsat_1_v5_gn_5_138981 Lactuca sativa HOM05D007575 ORTHO05D009611 3.0e-16 90.9 290 28.3
CBR_g123 Chara braunii HOM05D007575 ORTHO05D009611 2.4e-10 71.2 441 23.6
MBI08_g05086_MAGBIO Magnolia biondii HOM05D007575 ORTHO05D009611 3.5e-09 67.4 66 51.5
PGSC0003DMG400021612 Solanum tuberosum HOM05D007575 ORTHO05D009611 5.1e-08 63.5 91 39.6
CDE04G2022 Ceratophyllum demersum HOM05D002884 ORTHO05D003178 1.3e-06 58.9 96 35.4
Gorai.008G244000 Gossypium raimondii HOM05D002884 ORTHO05D003178 1.6e-06 58.5 97 30.9
Gohir.A12G225400 Gossypium hirsutum HOM05D002884 ORTHO05D003178 2.1e-06 58.2 97 30.9
Gohir.D12G228000 Gossypium hirsutum HOM05D002884 ORTHO05D003178 2.1e-06 58.2 97 30.9
vmacro00201 Vaccinium macrocarpon HOM05D002884 ORTHO05D003178 3.6e-06 57.4 97 30.9
Gohir.A09G193001 Gossypium hirsutum HOM05D002884 ORTHO05D003178 8.1e-06 56.2 97 30.9


User provided reference genes

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