Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_002794 Vanilla planifolia HOM05D006513 ORTHO05D008150 2.8e-100 368.6 188 100.0
HPP92_027747 Vanilla planifolia HOM05D006513 ORTHO05D008150 3.1e-46 189.1 102 98.0
Nn2g12003 Nelumbo nucifera HOM05D006513 ORTHO05D008150 5.2e-46 188.3 188 53.7
Cc06_g08720 Coffea canephora HOM05D006513 ORTHO05D008150 8.9e-46 187.6 188 50.5
Sed0011750 Sechium edule HOM05D006513 ORTHO05D008150 6.4e-44 181.4 188 50.5
Hma1.2p1_0665F.1_g199090 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 4.1e-43 178.7 190 52.1
Potri.018G066700 Populus trichocarpa HOM05D006513 ORTHO05D008150 9.2e-43 177.6 189 48.7
PGR102G1904 Punica granatum HOM05D006513 ORTHO05D008150 1.2e-42 177.2 189 51.3
Thecc.09G123900 Theobroma cacao HOM05D006513 ORTHO05D008150 1.2e-42 177.2 189 49.7
GSVIVG01015511001 Vitis vinifera HOM05D006513 ORTHO05D008150 1.2e-42 177.2 188 50.0
CANSAT11G2038 Cannabis sativa HOM05D006513 ORTHO05D008150 2.0e-42 176.4 190 51.6
Eucgr.C04187 Eucalyptus grandis HOM05D006513 ORTHO05D008150 2.7e-42 176.0 191 52.9
Ciclev10009612m.g Citrus clementina HOM05D006513 ORTHO05D008150 3.5e-42 175.6 189 50.3
CiPaw.03G242700 Carya illinoinensis HOM05D006513 ORTHO05D008150 2.3e-41 172.9 189 50.3
Gorai.001G041200 Gossypium raimondii HOM05D006513 ORTHO05D008150 2.3e-41 172.9 189 49.2
PSO455G0031 Papaver somniferum HOM05D006513 ORTHO05D008150 2.3e-41 172.9 190 50.0
Gohir.A07G035100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 3.0e-41 172.6 189 48.7
Nn8g39411 Nelumbo nucifera HOM05D006513 ORTHO05D008150 3.0e-41 172.6 188 52.7
Sed0002363 Sechium edule HOM05D006513 ORTHO05D008150 3.0e-41 172.6 190 51.1
Nitab4.5_0007523g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 3.9e-41 172.2 192 50.5
Sabra18G0060100 Salix brachista HOM05D006513 ORTHO05D008150 6.6e-41 171.4 189 48.1
Actinidia26398 Actinidia chinensis HOM05D006513 ORTHO05D008150 8.6e-41 171.0 188 48.4
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 8.6e-41 171.0 187 47.6
Peaxi162Scf00984g00021 Petunia axillaris HOM05D006513 ORTHO05D008150 8.6e-41 171.0 190 50.0
Haze_25608 Corylus avellana HOM05D006513 ORTHO05D008150 1.5e-40 170.2 186 48.9
PSO170G2269 Papaver somniferum HOM05D006513 ORTHO05D008150 1.5e-40 170.2 190 49.5
Gohir.D07G039100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 1.9e-40 169.9 189 48.7
Nitab4.5_0002556g0080 Nicotiana tabacum HOM05D006513 ORTHO05D008150 1.9e-40 169.9 192 49.0
Sp6g24280 Schrenkiella parvula HOM05D006513 ORTHO05D008150 2.5e-40 169.5 190 50.0
TPR.G10698 Trifolium pratense HOM05D006513 ORTHO05D008150 2.5e-40 169.5 196 50.0
AUR62033489 Chenopodium quinoa HOM05D006513 ORTHO05D008150 3.3e-40 169.1 191 51.3
Gohir.A08G239200 Gossypium hirsutum HOM05D006513 ORTHO05D008150 4.3e-40 168.7 189 49.7
vmacro06122 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 5.6e-40 168.3 189 48.1
vmacro06182 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 5.6e-40 168.3 189 48.1
BcaB05g22870 Brassica carinata HOM05D006513 ORTHO05D008150 7.3e-40 167.9 190 50.0
CARHR192710 Cardamine hirsuta HOM05D006513 ORTHO05D008150 7.3e-40 167.9 190 49.5
A02p06050 Brassica napus HOM05D006513 ORTHO05D008150 1.6e-39 166.8 190 50.5
BraA02t05556Z Brassica rapa HOM05D006513 ORTHO05D008150 1.6e-39 166.8 190 50.5
CAN.G377.11 Capsicum annuum HOM05D006513 ORTHO05D008150 1.6e-39 166.8 190 47.4
Manes.14G131100 Manihot esculenta HOM05D006513 ORTHO05D008150 1.6e-39 166.8 190 47.4
Ah.09g225970 Amaranthus hybridus HOM05D006513 ORTHO05D008150 2.1e-39 166.4 193 49.2
BcaC03g13734 Brassica carinata HOM05D006513 ORTHO05D008150 2.1e-39 166.4 190 49.5
BolC2t07016H Brassica oleracea HOM05D006513 ORTHO05D008150 2.1e-39 166.4 190 49.5
Duzib187G1241 Durio zibethinus HOM05D006513 ORTHO05D008150 2.8e-39 166.0 188 45.7
Sc08g0006720 Simmondsia chinensis HOM05D006513 ORTHO05D008150 3.6e-39 165.6 190 50.0
MBI01_g37808_MAGBIO Magnolia biondii HOM05D006513 ORTHO05D008150 4.7e-39 165.2 190 49.5
Manes.06G049600 Manihot esculenta HOM05D006513 ORTHO05D008150 6.2e-39 164.9 190 47.4
Prupe.7G240600 Prunus persica HOM05D006513 ORTHO05D008150 6.2e-39 164.9 187 49.2
Duzib150G1190 Durio zibethinus HOM05D006513 ORTHO05D008150 8.1e-39 164.5 184 48.9
FvH4_1g03550 Fragaria vesca HOM05D006513 ORTHO05D008150 8.1e-39 164.5 187 48.7
FAN19G1517 Fragaria x ananassa HOM05D006513 ORTHO05D008150 8.1e-39 164.5 187 48.7
PGSC0003DMG401020668 Solanum tuberosum HOM05D006513 ORTHO05D008150 1.8e-38 163.3 190 47.9
FAN28G2022 Fragaria x ananassa HOM05D006513 ORTHO05D008150 2.3e-38 162.9 187 48.1
Rhsim03G0247400 Rhododendron simsii HOM05D006513 ORTHO05D008150 2.3e-38 162.9 191 47.1
TWI34G1228 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 2.3e-38 162.9 189 47.1
ECA240G2511 Erigeron canadensis HOM05D006513 ORTHO05D008150 3.1e-38 162.5 190 49.5
FAN26G1752 Fragaria x ananassa HOM05D006513 ORTHO05D008150 3.1e-38 162.5 187 48.1
Psat4g039440 Pisum sativum HOM05D006513 ORTHO05D008150 3.1e-38 162.5 197 48.7
Aqoxy7G02130 Aquilegia oxysepala HOM05D006513 ORTHO05D008150 4.0e-38 162.2 189 50.3
AL6G31670 Arabidopsis lyrata HOM05D006513 ORTHO05D008150 4.0e-38 162.2 190 48.9
AT5G20120 Arabidopsis thaliana HOM05D006513 ORTHO05D008150 4.0e-38 162.2 190 48.9
Carub.0006s1850 Capsella rubella HOM05D006513 ORTHO05D008150 4.0e-38 162.2 190 48.9
Hma1.2p1_3730F.1_g337400 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 4.0e-38 162.2 192 49.5
Lj4g0014130 Lotus japonicus HOM05D006513 ORTHO05D008150 4.0e-38 162.2 196 47.4
MD02G1034700 Malus domestica HOM05D006513 ORTHO05D008150 4.0e-38 162.2 187 48.7
Sopen12g002610 Solanum pennellii HOM05D006513 ORTHO05D008150 4.0e-38 162.2 190 47.9
Solyc12g006660.2 Solanum lycopersicum HOM05D006513 ORTHO05D008150 5.2e-38 161.8 190 47.4
Phvul.003G163500 Phaseolus vulgaris HOM05D006513 ORTHO05D008150 6.8e-38 161.4 197 49.2
BNapus_Darmor_BZH_scaffold_38p01790 Brassica napus HOM05D006513 ORTHO05D008150 1.2e-37 160.6 196 49.0
Glyma.13G168100 Glycine max HOM05D006513 ORTHO05D008150 2.0e-37 159.8 197 47.2
THA.LOC104799645 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 2.0e-37 159.8 190 47.9
Aa31LG1G14240 Aethionema arabicum HOM05D006513 ORTHO05D008150 2.6e-37 159.5 191 45.5
arahy.Tifrunner.gnm1.ann1.7JIW3E Arachis hypogaea HOM05D006513 ORTHO05D008150 3.4e-37 159.1 197 48.2
Lsat_1_v5_gn_7_45681 Lactuca sativa HOM05D006513 ORTHO05D008150 3.4e-37 159.1 186 49.5
TWI63G1281 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 3.4e-37 159.1 193 48.2
EL10Ac8g18628 Beta vulgaris HOM05D006513 ORTHO05D008150 4.4e-37 158.7 193 48.7
Thhalv10014769m.g Eutrema salsugineum HOM05D006513 ORTHO05D008150 4.4e-37 158.7 190 47.4
HanXRQChr09g0242331 Helianthus annuus HOM05D006513 ORTHO05D008150 9.9e-37 157.5 191 48.7
RcHm_v2.0_Chr2g0089051 Rosa chinensis HOM05D006513 ORTHO05D008150 1.3e-36 157.1 187 47.1
Glyma.17G115800 Glycine max HOM05D006513 ORTHO05D008150 1.7e-36 156.8 197 46.2
CSS0037158 Camellia sinensis var. sinensis HOM05D006513 ORTHO05D008150 2.2e-36 156.4 191 46.1
TAR625G1184 Trochodendron aralioides HOM05D006513 ORTHO05D008150 2.9e-36 156.0 182 50.0
CsaV3_1G029880 Cucumis sativus L. HOM05D006513 ORTHO05D008150 1.1e-35 154.1 145 51.7
Medtr4g114105 Medicago truncatula HOM05D006513 ORTHO05D008150 1.1e-35 154.1 184 48.4
Gorai.004G277700 Gossypium raimondii HOM05D006513 ORTHO05D008150 2.4e-35 152.9 223 42.2
QL02p087926 Quercus lobata HOM05D006513 ORTHO05D008150 1.2e-34 150.6 252 38.5
Actinidia07430 Actinidia chinensis HOM05D006513 ORTHO05D008150 2.1e-34 149.8 190 45.3
THA.LOC104811035 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 4.6e-34 148.7 176 48.9
arahy.Tifrunner.gnm1.ann1.PME717 Arachis hypogaea HOM05D006513 ORTHO05D008150 1.7e-33 146.7 193 47.2
MD15G1175500 Malus domestica HOM05D006513 ORTHO05D008150 3.9e-33 145.6 187 46.0
AUR62011112 Chenopodium quinoa HOM05D000667 ORTHO05D002614 8.6e-33 144.4 161 50.3
Oeu021588.1 Olea europaea HOM05D006513 ORTHO05D008150 1.9e-32 143.3 158 46.8
HanXRQChr03g0062541 Helianthus annuus HOM05D006513 ORTHO05D008150 2.5e-32 142.9 190 46.8
Lalb_Chr12g0197841 Lupinus albus HOM05D006513 ORTHO05D008150 5.6e-32 141.7 202 46.0
Lalb_Chr13g0301941 Lupinus albus HOM05D006513 ORTHO05D008150 2.8e-31 139.4 202 44.6
Ca_21690_v3 Cicer arietinum L. HOM05D006513 ORTHO05D008150 2.2e-28 129.8 148 48.6
MELO3C010361.2 Cucumis melo HOM05D006513 ORTHO05D008150 9.2e-27 124.4 141 46.1
VMungo1215G0117 Vigna mungo HOM05D006513 ORTHO05D008150 3.5e-26 122.5 190 44.2
ATR1156G011 Amborella trichopoda HOM05D006513 ORTHO05D008150 6.0e-26 121.7 180 41.1
TAR626G1980 Trochodendron aralioides HOM05D006513 ORTHO05D008150 6.0e-26 121.7 140 47.9
Duzib168G2120 Durio zibethinus HOM05D006513 ORTHO05D008150 1.9e-24 116.7 151 43.7
SEGI_29438 Sequoiadendron giganteum HOM05D006513 ORTHO05D008150 3.3e-24 115.9 179 41.3
Hund26496 Selenicereus undatus HOM05D006513 ORTHO05D008150 7.6e-21 104.8 136 42.6
ClCG06G010970 Citrullus lanatus HOM05D006513 ORTHO05D008150 9.9e-21 104.4 125 44.0
Lj7A631T29 Lonicera japonica HOM05D006513 ORTHO05D008150 1.7e-20 103.6 144 41.7
Nitab4.5_0010819g0020 Nicotiana tabacum HOM05D005868 ORTHO05D006964 7.8e-18 94.7 91 52.7
AagrBONN_evm.TU.Sc2ySwM_340.153 Anthoceros agrestis HOM05D006513 ORTHO05D008150 1.0e-17 94.4 148 31.1
Mapoly0015s0101 Marchantia polymorpha HOM05D006513 ORTHO05D008150 1.3e-17 94.0 163 35.0
Pp3c5_25700 Physcomitrium patens HOM05D006513 ORTHO05D008150 2.3e-17 93.2 173 37.6
COL.COLO4_05780 Corchorus olitorius HOM05D006513 ORTHO05D008150 6.6e-17 91.7 86 47.7
Gohir.D08G259900 Gossypium hirsutum HOM05D006513 ORTHO05D008150 2.4e-14 83.2 104 48.1
CBR_g6525 Chara braunii HOM05D006513 ORTHO05D008150 9.0e-14 81.3 121 35.5
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 7.6e-13 78.2 86 52.3
Duzib150G1040 Durio zibethinus HOM05D006513 ORTHO05D008150 9.9e-13 77.8 94 48.9
Rhsim02G0222800 Rhododendron simsii HOM05D006513 ORTHO05D008150 1.3e-12 77.4 73 50.7
Nitab4.5_0017656g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 8.4e-12 74.7 97 44.3
TAR090G0005 Trochodendron aralioides HOM05D006513 ORTHO05D008150 7.9e-10 68.2 65 55.4


User provided reference genes

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