Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_002770 Vanilla planifolia HOM05D006302 ORTHO05D007960 0.0e+00 2008.4 1012 100.0
TAR629G0371 Trochodendron aralioides HOM05D006302 ORTHO05D007960 6.9e-262 907.9 1047 48.9
Nn4g24592 Nelumbo nucifera HOM05D006302 ORTHO05D007960 4.2e-259 898.7 1051 49.0
PSO063G0294 Papaver somniferum HOM05D006302 ORTHO05D007960 3.6e-250 869.0 1056 47.9
CDE07G1110 Ceratophyllum demersum HOM05D006302 ORTHO05D007960 2.6e-248 862.8 1031 48.0
Zm00001eb256430 Zea mays HOM05D006302 ORTHO05D007960 1.0e-244 850.9 1056 47.0
Os02g0772500 Oryza sativa ssp. japonica HOM05D006302 ORTHO05D007960 1.3e-244 850.5 1022 47.9
Eucgr.H00592 Eucalyptus grandis HOM05D006302 ORTHO05D007960 2.3e-241 839.7 1039 47.5
TWI81G1078 Tripterygium wilfordii HOM05D006302 ORTHO05D007960 2.3e-241 839.7 1067 45.9
Lalb_Chr14g0370421 Lupinus albus HOM05D006302 ORTHO05D007960 3.1e-238 829.3 1029 47.0
Ca_23670_v3 Cicer arietinum L. HOM05D006302 ORTHO05D007960 4.5e-237 825.5 1045 46.2
Glyma.16G219200 Glycine max HOM05D006302 ORTHO05D007960 7.7e-237 824.7 1044 45.6
ATR0598G116 Amborella trichopoda HOM05D006302 ORTHO05D007960 1.3e-236 823.9 1007 46.4
PGR083G1118 Punica granatum HOM05D006302 ORTHO05D007960 1.5e-235 820.5 1046 45.0
MELO3C002158.2 Cucumis melo HOM05D006302 ORTHO05D007960 2.5e-235 819.7 1055 46.1
GSVIVG01012939001 Vitis vinifera HOM05D006302 ORTHO05D007960 4.2e-235 818.9 1038 45.4
FAN13G0246 Fragaria x ananassa HOM05D006302 ORTHO05D007960 5.5e-235 818.5 932 48.1
ClCG01G014910 Citrullus lanatus HOM05D006302 ORTHO05D007960 3.6e-234 815.8 1045 46.1
CsaV3_1G007420 Cucumis sativus L. HOM05D006302 ORTHO05D007960 8.0e-234 814.7 1070 45.6
TPR.G28992 Trifolium pratense HOM05D006302 ORTHO05D007960 2.6e-232 809.7 1056 44.3
FAN04G1871 Fragaria x ananassa HOM05D006302 ORTHO05D007960 9.8e-232 807.7 924 48.5
Cc04_g09070 Coffea canephora HOM05D006302 ORTHO05D007960 4.8e-231 805.4 1055 45.1
Dinv19314 Davidia involucrata HOM05D006302 ORTHO05D007960 8.3e-231 804.7 1024 45.6
FAN08G1906 Fragaria x ananassa HOM05D006302 ORTHO05D007960 2.4e-230 803.1 919 48.3
RcHm_v2.0_Chr7g0177661 Rosa chinensis HOM05D006302 ORTHO05D007960 3.1e-230 802.7 1043 45.3
CiPaw.15G150000 Carya illinoinensis HOM05D006302 ORTHO05D007960 5.4e-230 802.0 1044 45.0
Phvul.004G145200 Phaseolus vulgaris HOM05D006302 ORTHO05D007960 9.1e-230 801.2 1043 45.3
Rhsim09G0028600 Rhododendron simsii HOM05D006302 ORTHO05D007960 1.6e-229 800.4 1062 44.3
Lj2g0026336 Lotus japonicus HOM05D006302 ORTHO05D007960 1.0e-228 797.7 1045 44.0
Thecc.03G067700 Theobroma cacao HOM05D006302 ORTHO05D007960 1.7e-228 797.0 906 48.0
Actinidia34644 Actinidia chinensis HOM05D006302 ORTHO05D007960 2.3e-228 796.6 1049 45.4
FvH4_5g17940 Fragaria vesca HOM05D006302 ORTHO05D007960 2.9e-228 796.2 1058 45.2
FAN18G4444 Fragaria x ananassa HOM05D006302 ORTHO05D007960 6.6e-228 795.0 1063 45.2
VMungo0464G0980 Vigna mungo HOM05D006302 ORTHO05D007960 2.5e-227 793.1 1052 44.7
Sed0020457 Sechium edule HOM05D006302 ORTHO05D007960 3.3e-227 792.7 1069 44.0
Potri.015G033300 Populus trichocarpa HOM05D006302 ORTHO05D007960 3.6e-226 789.3 1081 43.4
Manes.06G000900 Manihot esculenta HOM05D006302 ORTHO05D007960 4.7e-226 788.9 1081 44.5
Medtr4g016590 Medicago truncatula HOM05D006302 ORTHO05D007960 8.0e-226 788.1 1036 45.2
Psat1g124600 Pisum sativum HOM05D006302 ORTHO05D007960 8.0e-226 788.1 1045 44.3
MD14G1242200 Malus domestica HOM05D006302 ORTHO05D007960 4.0e-225 785.8 1053 44.9
Prupe.5G239800 Prunus persica HOM05D006302 ORTHO05D007960 4.0e-225 785.8 1059 44.1
CAN.G637.21 Capsicum annuum HOM05D006302 ORTHO05D007960 6.8e-225 785.0 1060 44.1
Ciclev10018592m.g Citrus clementina HOM05D006302 ORTHO05D007960 6.8e-225 785.0 1036 44.9
Duzib084G0934 Durio zibethinus HOM05D006302 ORTHO05D007960 1.5e-224 783.9 1017 45.6
arahy.Tifrunner.gnm1.ann1.YU9TRY Arachis hypogaea HOM05D006302 ORTHO05D007960 5.7e-224 781.9 1107 43.0
Atru.chr9.205 Acer truncatum HOM05D006302 ORTHO05D007960 1.3e-223 780.8 1067 44.2
Sopen03g028860 Solanum pennellii HOM05D006302 ORTHO05D007960 6.3e-223 778.5 1052 44.1
Sabra15G0027400 Salix brachista HOM05D006302 ORTHO05D007960 1.6e-221 773.9 1166 40.8
Gohir.D02G118900 Gossypium hirsutum HOM05D006302 ORTHO05D007960 4.5e-221 772.3 1035 45.1
vmacro22676 Vaccinium macrocarpon HOM05D006302 ORTHO05D007960 4.5e-221 772.3 1116 41.9
arahy.Tifrunner.gnm1.ann1.2W4JQ8 Arachis hypogaea HOM05D006302 ORTHO05D007960 5.9e-221 771.9 1089 43.3
Gohir.A03G090800 Gossypium hirsutum HOM05D006302 ORTHO05D007960 7.8e-221 771.5 1040 44.5
Gorai.005G134900 Gossypium raimondii HOM05D006302 ORTHO05D007960 7.8e-221 771.5 1041 44.9
Solyc03g098160.3 Solanum lycopersicum HOM05D006302 ORTHO05D007960 1.0e-220 771.2 1052 43.8
DCAR_010206 Daucus carota HOM05D006302 ORTHO05D007960 1.3e-220 770.8 1043 44.0
SalBow5G5149 Salvia bowleyana HOM05D006302 ORTHO05D007960 8.6e-220 768.1 924 46.1
CSS0040809 Camellia sinensis var. sinensis HOM05D006302 ORTHO05D007960 1.9e-219 766.9 1086 42.9
MSTRG.23195 Avicennia marina HOM05D006302 ORTHO05D007960 7.3e-219 765.0 1071 43.6
SalBow5G5312 Salvia bowleyana HOM05D006302 ORTHO05D007960 4.0e-217 759.2 938 45.7
Lj9C414G14 Lonicera japonica HOM05D006302 ORTHO05D007960 2.0e-216 756.9 893 46.9
Nitab4.5_0005200g0040 Nicotiana tabacum HOM05D006302 ORTHO05D007960 3.7e-215 752.7 1044 42.8
CSS0030577 Camellia sinensis var. sinensis HOM05D006302 ORTHO05D007960 1.1e-214 751.1 927 45.4
Migut.O00235 Erythranthe guttata HOM05D006302 ORTHO05D007960 1.9e-214 750.4 1055 43.2
AL3G30880 Arabidopsis lyrata HOM05D006302 ORTHO05D007960 7.8e-213 745.0 1060 42.7
Sp3g15860 Schrenkiella parvula HOM05D006302 ORTHO05D007960 8.6e-212 741.5 1038 43.4
THA.LOC104821822 Tarenaya hassleriana HOM05D006302 ORTHO05D007960 1.1e-211 741.1 1046 42.3
Lsat_1_v5_gn_2_15380 Lactuca sativa HOM05D006302 ORTHO05D007960 8.0e-210 734.9 1034 41.7
AT3G17740 Arabidopsis thaliana HOM05D006302 ORTHO05D007960 3.1e-209 733.0 1039 42.7
Thhalv10019937m.g Eutrema salsugineum HOM05D006302 ORTHO05D007960 5.2e-209 732.3 1036 42.5
Carub.0003s1747 Capsella rubella HOM05D006302 ORTHO05D007960 3.7e-207 726.1 1029 42.4
C05p48650 Brassica napus HOM05D006302 ORTHO05D007960 1.4e-206 724.2 1049 42.7
BolC5t33600H Brassica oleracea HOM05D006302 ORTHO05D007960 1.4e-206 724.2 1049 42.7
Aa31LG8G4630 Aethionema arabicum HOM05D006302 ORTHO05D007960 7.0e-206 721.8 1074 41.6
Nitab4.5_0001180g0010 Nicotiana tabacum HOM05D006302 ORTHO05D007960 9.2e-206 721.5 1062 41.3
SGA_v2.0_scaffold90G27777 Striga asiatica HOM05D006302 ORTHO05D007960 1.2e-205 721.1 1079 42.3
HanXRQChr01g0002621 Helianthus annuus HOM05D006302 ORTHO05D007960 6.0e-205 718.8 1043 41.6
ECA238G1211 Erigeron canadensis HOM05D006302 ORTHO05D007960 1.3e-204 717.6 918 43.1
AUR62034018 Chenopodium quinoa HOM05D006302 ORTHO05D007960 3.0e-204 716.5 966 44.9
EL10Ac8g19491 Beta vulgaris HOM05D006302 ORTHO05D007960 2.5e-203 713.4 1033 43.8
BcaC05g28760 Brassica carinata HOM05D006302 ORTHO05D007960 4.3e-203 712.6 1048 42.0
Oeu060652.1 Olea europaea HOM05D006302 ORTHO05D007960 2.8e-202 709.9 1061 41.5
Haze_18958 Corylus avellana HOM05D006302 ORTHO05D007960 8.1e-202 708.4 1050 42.7
Peaxi162Scf00171g00631 Petunia axillaris HOM05D006302 ORTHO05D007960 5.6e-195 685.6 1057 40.3
A05p32110 Brassica napus HOM05D006302 ORTHO05D007960 8.9e-193 678.3 892 43.3
SEGI_33145 Sequoiadendron giganteum HOM05D006302 ORTHO05D007960 1.2e-189 667.9 1074 38.5
Ca_26696_v3 Cicer arietinum L. HOM05D006302 ORTHO05D007960 2.5e-187 660.2 824 47.5
BraA05t22040Z Brassica rapa HOM05D006302 ORTHO05D007960 2.0e-184 650.6 1062 39.5
SHI19119 Sapria himalayana HOM05D006302 ORTHO05D007960 2.4e-182 643.7 1125 37.1
QL10p033145 Quercus lobata HOM05D006302 ORTHO05D007960 2.1e-178 630.6 805 46.8
Ca_22760_v3 Cicer arietinum L. HOM05D006302 ORTHO05D007960 3.0e-164 583.6 661 49.3
Ca_05032_v3 Cicer arietinum L. HOM05D006302 ORTHO05D007960 5.1e-164 582.8 660 49.2
AT3G17712 Arabidopsis thaliana HOM05D006302 ORTHO05D007960 2.7e-157 560.5 787 43.2
unitig_22.g5442 Utricularia gibba HOM05D006302 ORTHO05D007960 3.5e-157 560.1 1052 36.5
COL.COLO4_09239 Corchorus olitorius HOM05D006302 ORTHO05D007960 1.0e-135 488.8 667 42.3
AagrBONN_evm.TU.Sc2ySwM_362.1719 Anthoceros agrestis HOM05D006302 ORTHO05D007960 5.5e-134 483.0 1116 32.3
Sc10g0008940 Simmondsia chinensis HOM05D006302 ORTHO05D007960 8.0e-133 479.2 604 45.2
CARHR093080 Cardamine hirsuta HOM05D006302 ORTHO05D007960 7.0e-129 466.1 617 42.9
Mapoly0172s0015 Marchantia polymorpha HOM05D006302 ORTHO05D007960 3.2e-126 457.2 839 34.9
Cpa.g.sc7.123 Carica papaya HOM05D006302 ORTHO05D007960 8.0e-125 452.6 502 49.6
SMO340G0100 Selaginella moellendorffii HOM05D006302 ORTHO05D007960 3.7e-122 443.7 918 32.6
Pp3c9_1610 Physcomitrium patens HOM05D006302 ORTHO05D007960 3.8e-111 407.1 966 31.3
Pp3c9_1614 Physcomitrium patens HOM05D006302 ORTHO05D007960 3.8e-111 407.1 966 31.3
Glyma.09G169600 Glycine max HOM05D006302 ORTHO05D007960 1.9e-97 361.7 515 41.6
C05p48600 Brassica napus HOM05D006302 ORTHO05D007960 1.6e-88 332.0 385 48.1
CBR_g4862 Chara braunii HOM05D006302 ORTHO05D007960 3.4e-83 314.3 1111 25.7
Sc10g0008950 Simmondsia chinensis HOM05D006302 ORTHO05D007960 3.2e-81 307.8 406 45.6
Cre13.g589650 Chlamydomonas reinhardtii HOM05D006302 ORTHO05D007960 9.4e-25 120.2 271 28.0
CAN.G852.1 Capsicum annuum HOM05D006302 ORTHO05D007960 1.1e-12 80.1 85 49.4
Lsat_1_v5_gn_0_6420 Lactuca sativa HOM05D002112 ORTHO05D007960 2.4e-12 79.0 127 33.9
COL.COLO4_09240 Corchorus olitorius HOM05D006302 ORTHO05D007960 8.8e-07 60.5 40 70.0
Actinidia04194 Actinidia chinensis HOM05D006302 ORTHO05D007960 3.4e-06 58.5 73 39.7


User provided reference genes

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