Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_002651 Vanilla planifolia HOM05D006965 ORTHO05D008652 3.6e-137 491.5 234 100.0
Gohir.A08G026760 Gossypium hirsutum HOM05D006965 ORTHO05D008652 4.9e-78 295.0 236 58.9
Thecc.01G416200 Theobroma cacao HOM05D006965 ORTHO05D008652 6.4e-78 294.7 238 56.7
Nn2g15664 Nelumbo nucifera HOM05D006965 ORTHO05D008652 1.1e-77 293.9 239 56.9
Gorai.004G035500 Gossypium raimondii HOM05D006965 ORTHO05D008652 1.9e-77 293.1 236 58.5
Gohir.D08G037500 Gossypium hirsutum HOM05D006965 ORTHO05D008652 3.2e-77 292.4 236 58.5
Sabra09G0014600 Salix brachista HOM05D006965 ORTHO05D008652 3.2e-77 292.4 239 59.0
Manes.10G151000 Manihot esculenta HOM05D006965 ORTHO05D008652 4.2e-77 292.0 239 57.7
TAR633G1267 Trochodendron aralioides HOM05D006965 ORTHO05D008652 4.2e-77 292.0 238 58.0
THA.LOC104827577 Tarenaya hassleriana HOM05D006965 ORTHO05D008652 7.1e-77 291.2 236 55.9
Lj3g0017203 Lotus japonicus HOM05D006965 ORTHO05D008652 1.2e-76 290.4 240 55.8
PSO339G5860 Papaver somniferum HOM05D006965 ORTHO05D008652 3.5e-76 288.9 241 55.2
Lalb_Chr25g0283521 Lupinus albus HOM05D006965 ORTHO05D008652 1.0e-75 287.3 239 54.0
MBI04_g33895_MAGBIO Magnolia biondii HOM05D006965 ORTHO05D008652 1.0e-75 287.3 241 56.8
Aqoxy1G00028 Aquilegia oxysepala HOM05D006965 ORTHO05D008652 1.8e-75 286.6 237 57.0
Medtr2g060820 Medicago truncatula HOM05D006965 ORTHO05D008652 3.0e-75 285.8 236 55.5
TPR.G11733 Trifolium pratense HOM05D006965 ORTHO05D008652 3.0e-75 285.8 239 55.2
Prupe.2G004200 Prunus persica HOM05D006965 ORTHO05D008652 5.1e-75 285.0 240 55.8
Ciclev10031978m.g Citrus clementina HOM05D006965 ORTHO05D008652 8.7e-75 284.3 239 56.1
Potri.009G023200 Populus trichocarpa HOM05D006965 ORTHO05D008652 8.7e-75 284.3 239 57.7
PSO384G4145 Papaver somniferum HOM05D006965 ORTHO05D008652 1.5e-74 283.5 241 53.9
Atru.chr11.2694 Acer truncatum HOM05D006965 ORTHO05D008652 2.5e-74 282.7 239 56.9
QL04p003153 Quercus lobata HOM05D006965 ORTHO05D008652 3.3e-74 282.3 239 56.5
Aa31LG1G25970 Aethionema arabicum HOM05D006965 ORTHO05D008652 7.4e-74 281.2 235 54.5
MD02G1318500 Malus domestica HOM05D006965 ORTHO05D008652 7.4e-74 281.2 241 55.6
QL04p000072 Quercus lobata HOM05D006965 ORTHO05D008652 1.3e-73 280.4 239 56.1
GSVIVG01001368001 Vitis vinifera HOM05D006965 ORTHO05D008652 2.1e-73 279.6 239 54.8
Psat1g128200 Pisum sativum HOM05D006965 ORTHO05D008652 2.8e-73 279.3 239 54.0
QL04p003146 Quercus lobata HOM05D006965 ORTHO05D008652 2.8e-73 279.3 239 56.1
BcaB02g08813 Brassica carinata HOM05D006965 ORTHO05D008652 3.6e-73 278.9 237 52.3
Cfa004805 Carpinus fangiana HOM05D006965 ORTHO05D008652 8.1e-73 277.7 239 53.6
Ca_02931_v3 Cicer arietinum L. HOM05D006965 ORTHO05D008652 1.1e-72 277.3 242 54.1
MD07G1002700 Malus domestica HOM05D006965 ORTHO05D008652 3.1e-72 275.8 252 52.8
BraA05t19431Z Brassica rapa HOM05D006965 ORTHO05D008652 5.3e-72 275.0 236 53.8
PGSC0003DMG400006312 Solanum tuberosum HOM05D006965 ORTHO05D008652 6.9e-72 274.6 236 55.5
Sp4g26490 Schrenkiella parvula HOM05D006965 ORTHO05D008652 1.2e-71 273.9 235 51.9
Actinidia32338 Actinidia chinensis HOM05D006965 ORTHO05D008652 2.6e-71 272.7 238 55.0
A05p04570 Brassica napus HOM05D006965 ORTHO05D008652 2.6e-71 272.7 236 53.4
Glyma.08G149400 Glycine max HOM05D006965 ORTHO05D008652 2.6e-71 272.7 243 53.9
RcHm_v2.0_Chr1g0313421 Rosa chinensis HOM05D006965 ORTHO05D008652 5.8e-71 271.6 241 53.5
Carub.0004s2700 Capsella rubella HOM05D006965 ORTHO05D008652 7.6e-71 271.2 235 52.3
Haze_10398 Corylus avellana HOM05D006965 ORTHO05D008652 7.6e-71 271.2 239 53.6
FvH4_7g00170 Fragaria vesca HOM05D006965 ORTHO05D008652 1.3e-70 270.4 240 52.5
CiPaw.13G000900 Carya illinoinensis HOM05D006965 ORTHO05D008652 1.7e-70 270.0 239 53.6
CsaV3_3G032450 Cucumis sativus L. HOM05D006965 ORTHO05D008652 2.2e-70 269.6 238 53.4
Phvul.005G039600 Phaseolus vulgaris HOM05D006965 ORTHO05D008652 2.2e-70 269.6 238 53.4
AL4G43420 Arabidopsis lyrata HOM05D006965 ORTHO05D008652 2.9e-70 269.2 237 51.5
BcaC02g12316 Brassica carinata HOM05D006965 ORTHO05D008652 2.9e-70 269.2 234 51.3
C04p05300 Brassica napus HOM05D006965 ORTHO05D008652 2.9e-70 269.2 234 51.3
FAN01G2144 Fragaria x ananassa HOM05D006965 ORTHO05D008652 2.9e-70 269.2 240 52.5
CAN.G261.10 Capsicum annuum HOM05D006965 ORTHO05D008652 8.4e-70 267.7 236 54.7
Sopen01g033500 Solanum pennellii HOM05D006965 ORTHO05D008652 8.4e-70 267.7 239 54.4
Thhalv10001527m.g Eutrema salsugineum HOM05D006965 ORTHO05D008652 1.1e-69 267.3 235 49.8
CANSAT78G1981 Cannabis sativa HOM05D006965 ORTHO05D008652 1.9e-69 266.5 239 53.1
Sc12g0002350 Simmondsia chinensis HOM05D006965 ORTHO05D008652 1.9e-69 266.5 237 53.6
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 2.4e-69 266.2 239 52.3
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 2.4e-69 266.2 239 52.3
Solyc01g073930.3 Solanum lycopersicum HOM05D006965 ORTHO05D008652 2.4e-69 266.2 239 54.0
VMungo1080G1640 Vigna mungo HOM05D006965 ORTHO05D008652 2.4e-69 266.2 236 53.8
Eucgr.G02572 Eucalyptus grandis HOM05D006965 ORTHO05D008652 3.2e-69 265.8 239 51.9
TWI73G0408 Tripterygium wilfordii HOM05D006965 ORTHO05D008652 2.1e-68 263.1 239 53.6
Nitab4.5_0000892g0120 Nicotiana tabacum HOM05D006965 ORTHO05D008652 4.6e-68 261.9 236 53.4
Cc02_g27080 Coffea canephora HOM05D006965 ORTHO05D008652 6.0e-68 261.5 236 51.7
FAN01G0465 Fragaria x ananassa HOM05D006965 ORTHO05D008652 6.0e-68 261.5 252 50.0
Os06g0618150 Oryza sativa ssp. japonica HOM05D006965 ORTHO05D008652 1.8e-67 260.0 236 53.0
SalBow5G3371 Salvia bowleyana HOM05D006965 ORTHO05D008652 1.8e-67 260.0 234 52.1
MSTRG.17063 Avicennia marina HOM05D006965 ORTHO05D008652 3.0e-67 259.2 240 52.5
Nitab4.5_0004592g0020 Nicotiana tabacum HOM05D006965 ORTHO05D008652 3.0e-67 259.2 236 53.0
ClCG10G012640 Citrullus lanatus HOM05D006965 ORTHO05D008652 3.9e-67 258.8 246 51.6
Zm00001eb275720 Zea mays HOM05D006965 ORTHO05D008652 6.7e-67 258.1 236 52.5
AT2G44420 Arabidopsis thaliana HOM05D006965 ORTHO05D008652 8.7e-67 257.7 267 46.4
ATR0605G047 Amborella trichopoda HOM05D006965 ORTHO05D008652 1.5e-66 256.9 236 54.7
AUR62012162 Chenopodium quinoa HOM05D006965 ORTHO05D008652 1.5e-66 256.9 236 53.8
Rhsim07G0050600 Rhododendron simsii HOM05D006965 ORTHO05D008652 2.5e-66 256.1 238 52.1
BolC4t22170H Brassica oleracea HOM05D006965 ORTHO05D008652 3.3e-66 255.8 258 46.5
Sed0016917 Sechium edule HOM05D006965 ORTHO05D008652 4.3e-66 255.4 240 52.1
vmacro13617 Vaccinium macrocarpon HOM05D006965 ORTHO05D008652 1.3e-65 253.8 238 51.3
CSS0026631 Camellia sinensis var. sinensis HOM05D006965 ORTHO05D008652 2.1e-65 253.1 238 52.5
Migut.B01364 Erythranthe guttata HOM05D006965 ORTHO05D008652 3.7e-65 252.3 234 51.3
TAR362G1148 Trochodendron aralioides HOM05D006965 ORTHO05D008652 3.7e-65 252.3 205 59.5
FAN10G4273 Fragaria x ananassa HOM05D006965 ORTHO05D008652 4.8e-65 251.9 233 51.1
Hund16040 Selenicereus undatus HOM05D006965 ORTHO05D008652 8.1e-65 251.1 230 52.2
CDE05G0249 Ceratophyllum demersum HOM05D006965 ORTHO05D008652 1.2e-63 247.3 240 50.4
SGA_v2.0_scaffold5G03114 Striga asiatica HOM05D006965 ORTHO05D008652 1.2e-63 247.3 238 51.7
FAN06G0111 Fragaria x ananassa HOM05D006965 ORTHO05D008652 3.4e-63 245.7 220 52.7
MELO3C023943.2 Cucumis melo HOM05D006965 ORTHO05D008652 5.8e-63 245.0 231 51.1
ECA248G1794 Erigeron canadensis HOM05D006965 ORTHO05D008652 2.5e-61 239.6 237 49.8
AUR62022798 Chenopodium quinoa HOM05D006965 ORTHO05D008652 7.9e-60 234.6 231 51.5
Duzib114G0529 Durio zibethinus HOM05D006965 ORTHO05D008652 7.9e-60 234.6 205 55.1
Ah.16g102760 Amaranthus hybridus HOM05D006965 ORTHO05D008652 1.3e-59 233.8 234 50.9
PGR004G0492 Punica granatum HOM05D006965 ORTHO05D008652 2.5e-58 229.6 205 54.6
CARHR139580 Cardamine hirsuta HOM05D006965 ORTHO05D008652 5.7e-58 228.4 183 55.2
HanXRQChr01g0018681 Helianthus annuus HOM05D006965 ORTHO05D008652 1.9e-53 213.4 229 47.2
EL10Ac2g04673 Beta vulgaris HOM05D006965 ORTHO05D008652 7.9e-52 208.0 204 52.5
unitig_26.g9594 Utricularia gibba HOM05D001227 ORTHO05D001082 1.8e-51 206.8 215 46.5
Dinv43490 Davidia involucrata HOM05D006965 ORTHO05D008652 1.5e-47 193.7 165 58.2
Hma1.2p1_2998F.1_g331493 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 4.5e-47 192.2 165 55.8
Hma1.2p1_2998F.1_g331496 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 4.5e-47 192.2 165 55.8
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 5.0e-46 188.7 165 55.2
Cfa022003 Carpinus fangiana HOM05D006965 ORTHO05D008652 1.4e-45 187.2 163 54.6
Lsat_1_v5_gn_1_110081 Lactuca sativa HOM05D006965 ORTHO05D008652 1.5e-42 177.2 192 48.4
FAN03G0167 Fragaria x ananassa HOM05D006965 ORTHO05D008652 6.3e-41 171.8 163 50.3
SEGI_12556 Sequoiadendron giganteum HOM05D006965 ORTHO05D008652 4.5e-39 165.6 130 59.2
Eucgr.L03457 Eucalyptus grandis HOM05D006965 ORTHO05D008652 1.0e-38 164.5 131 52.7
Peaxi162Scf00878g00321 Petunia axillaris HOM05D006965 ORTHO05D008652 1.4e-37 160.6 175 45.7
Mapoly0087s0073 Marchantia polymorpha HOM05D006965 ORTHO05D008652 5.5e-37 158.7 208 37.5
Haze_10414 Corylus avellana HOM05D006965 ORTHO05D008652 4.2e-29 132.5 103 60.2
DCAR_029603 Daucus carota HOM05D006965 ORTHO05D008652 4.4e-26 122.5 102 59.8
Oeu009369.1 Olea europaea HOM05D006965 ORTHO05D008652 4.8e-25 119.0 146 43.8
SMO132G0001 Selaginella moellendorffii HOM05D006965 ORTHO05D008652 2.9e-22 109.8 213 32.4
arahy.Tifrunner.gnm1.ann1.Z1UMC7 Arachis hypogaea HOM05D006965 ORTHO05D008652 4.0e-19 99.4 108 43.5
arahy.Tifrunner.gnm1.ann1.ZJD8NP Arachis hypogaea HOM05D006965 ORTHO05D008652 5.2e-19 99.0 108 43.5
Cpa.g.sc189.20 Carica papaya HOM05D006965 ORTHO05D008652 2.2e-17 93.6 68 57.4
TPR.G14363 Trifolium pratense HOM05D006965 ORTHO05D008652 2.9e-14 83.2 63 61.9
CBR_g34612 Chara braunii HOM05D006965 ORTHO05D008652 1.9e-13 80.5 112 36.6


User provided reference genes

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