Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_002650 Vanilla planifolia HOM05D006712 ORTHO05D008219 2.2e-202 708.8 360 100.0
Aqoxy1G00652 Aquilegia oxysepala HOM05D006712 ORTHO05D008219 9.6e-73 278.1 361 47.9
Zm00001eb282230 Zea mays HOM05D006712 ORTHO05D008219 4.8e-72 275.8 366 46.2
PSO339G1919 Papaver somniferum HOM05D006712 ORTHO05D008219 3.1e-71 273.1 358 46.6
Phvul.011G099200 Phaseolus vulgaris HOM05D006712 ORTHO05D008219 4.0e-71 272.7 378 45.5
TAR623G0680 Trochodendron aralioides HOM05D006712 ORTHO05D008219 4.0e-71 272.7 361 45.7
Lalb_Chr19g0136261 Lupinus albus HOM05D006712 ORTHO05D008219 1.5e-70 270.8 374 45.2
PSO384G4991 Papaver somniferum HOM05D006712 ORTHO05D008219 2.2e-69 266.9 359 46.0
Eucgr.B03815 Eucalyptus grandis HOM05D006712 ORTHO05D008219 1.9e-68 263.8 380 43.7
VMungo1127G0962 Vigna mungo HOM05D006712 ORTHO05D008219 1.9e-68 263.8 378 44.2
Sopen06g030560 Solanum pennellii HOM05D006712 ORTHO05D008219 2.1e-67 260.4 358 46.4
arahy.Tifrunner.gnm1.ann1.4CVW1F Arachis hypogaea HOM05D006712 ORTHO05D008219 4.6e-67 259.2 395 42.5
Glyma.11G178255 Glycine max HOM05D006712 ORTHO05D008219 4.6e-67 259.2 380 43.7
Lalb_Chr03g0028431 Lupinus albus HOM05D006712 ORTHO05D008219 6.0e-67 258.8 359 44.3
Atru.chr3.3110 Acer truncatum HOM05D006712 ORTHO05D008219 1.0e-66 258.1 359 45.4
CSS0013127 Camellia sinensis var. sinensis HOM05D006712 ORTHO05D008219 1.0e-66 258.1 383 44.1
CiPaw.13G129200 Carya illinoinensis HOM05D006712 ORTHO05D008219 1.0e-66 258.1 377 44.6
RcHm_v2.0_Chr5g0048501 Rosa chinensis HOM05D006712 ORTHO05D008219 1.7e-66 257.3 356 45.8
Cfa010172 Carpinus fangiana HOM05D006712 ORTHO05D008219 2.3e-66 256.9 386 43.3
Lj3g0027754 Lotus japonicus HOM05D006712 ORTHO05D008219 3.9e-66 256.1 375 43.7
FAN16G2749 Fragaria x ananassa HOM05D006712 ORTHO05D008219 6.6e-66 255.4 358 45.5
Thecc.09G272000 Theobroma cacao HOM05D006712 ORTHO05D008219 6.6e-66 255.4 378 45.2
Ciclev10028702m.g Citrus clementina HOM05D006712 ORTHO05D008219 2.5e-65 253.4 358 44.4
PGSC0003DMG400005929 Solanum tuberosum HOM05D006712 ORTHO05D008219 3.3e-65 253.1 358 45.3
AUR62020228 Chenopodium quinoa HOM05D006712 ORTHO05D008219 5.6e-65 252.3 371 43.7
AUR62001554 Chenopodium quinoa HOM05D006712 ORTHO05D008219 1.3e-64 251.1 371 43.4
Glyma.12G094900 Glycine max HOM05D006712 ORTHO05D008219 1.3e-64 251.1 378 43.4
Hma1.2p1_0101F.1_g049480 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 1.3e-64 251.1 356 47.2
Hund20948 Selenicereus undatus HOM05D006712 ORTHO05D008219 1.3e-64 251.1 377 43.2
FAN11G0164 Fragaria x ananassa HOM05D006712 ORTHO05D008219 2.8e-64 250.0 358 44.7
Potri.001G216500 Populus trichocarpa HOM05D006712 ORTHO05D008219 2.8e-64 250.0 358 45.5
Lj1A268G10 Lonicera japonica HOM05D006712 ORTHO05D008219 3.6e-64 249.6 381 42.3
DCAR_014052 Daucus carota HOM05D006712 ORTHO05D008219 3.1e-63 246.5 384 43.5
Dinv18839 Davidia involucrata HOM05D006712 ORTHO05D008219 3.1e-63 246.5 356 45.5
Gohir.A09G099400 Gossypium hirsutum HOM05D006712 ORTHO05D008219 1.2e-62 244.6 379 43.0
COL.COLO4_25432 Corchorus olitorius HOM05D006712 ORTHO05D008219 1.5e-62 244.2 375 44.3
CsaV3_1G043820 Cucumis sativus L. HOM05D006712 ORTHO05D008219 4.5e-62 242.7 374 40.9
THA.LOC104810933 Tarenaya hassleriana HOM05D006712 ORTHO05D008219 4.5e-62 242.7 354 44.4
Sed0013977 Sechium edule HOM05D006712 ORTHO05D008219 5.8e-62 242.3 369 42.3
Gorai.006G115800 Gossypium raimondii HOM05D006712 ORTHO05D008219 1.7e-61 240.7 395 42.3
Manes.11G101400 Manihot esculenta HOM05D006712 ORTHO05D008219 2.2e-61 240.4 377 45.1
Duzib168G2384 Durio zibethinus HOM05D006712 ORTHO05D008219 2.9e-61 240.0 389 41.4
MELO3C015061.2 Cucumis melo HOM05D006712 ORTHO05D008219 6.4e-61 238.8 374 40.6
SalBow3G4582 Salvia bowleyana HOM05D006712 ORTHO05D008219 6.4e-61 238.8 396 43.4
TWI31G0890 Tripterygium wilfordii HOM05D006712 ORTHO05D008219 6.4e-61 238.8 380 42.6
CARHR191410 Cardamine hirsuta HOM05D006712 ORTHO05D008219 1.4e-60 237.7 372 44.1
Sp6g23080 Schrenkiella parvula HOM05D006712 ORTHO05D008219 2.4e-60 236.9 382 42.1
BcaB01g04741 Brassica carinata HOM05D006712 ORTHO05D008219 3.2e-60 236.5 361 42.7
MSTRG.17680 Avicennia marina HOM05D006712 ORTHO05D008219 5.5e-60 235.7 386 43.3
A03p10600 Brassica napus HOM05D006712 ORTHO05D008219 5.5e-60 235.7 368 42.4
CAN.G919.48 Capsicum annuum HOM05D006712 ORTHO05D008219 5.5e-60 235.7 375 44.3
arahy.Tifrunner.gnm1.ann1.UJS8TC Arachis hypogaea HOM05D006712 ORTHO05D008219 1.2e-59 234.6 396 40.7
C03p12200 Brassica napus HOM05D006712 ORTHO05D008219 1.2e-59 234.6 368 42.7
ClCG03G012180 Citrullus lanatus HOM05D006712 ORTHO05D008219 1.6e-59 234.2 415 38.3
BolC3t13693H Brassica oleracea HOM05D006712 ORTHO05D008219 2.1e-59 233.8 369 43.1
Nitab4.5_0008897g0020 Nicotiana tabacum HOM05D006712 ORTHO05D008219 2.7e-59 233.4 366 43.4
BraA03t10372Z Brassica rapa HOM05D006712 ORTHO05D008219 3.5e-59 233.0 373 41.8
BcaC01g06601 Brassica carinata HOM05D006712 ORTHO05D008219 4.6e-59 232.6 369 42.8
Rhsim13G0196500 Rhododendron simsii HOM05D006712 ORTHO05D008219 4.6e-59 232.6 453 38.9
AL6G33100 Arabidopsis lyrata HOM05D006712 ORTHO05D008219 3.0e-58 229.9 377 42.7
Sc21g0006790 Simmondsia chinensis HOM05D006712 ORTHO05D008219 3.9e-58 229.6 368 40.8
Ca_19473_v3 Cicer arietinum L. HOM05D006712 ORTHO05D008219 6.7e-58 228.8 374 42.0
EL10Ac7g16293 Beta vulgaris HOM05D006712 ORTHO05D008219 4.3e-57 226.1 407 38.3
AT5G22120 Arabidopsis thaliana HOM05D006712 ORTHO05D008219 7.4e-57 225.3 375 41.6
Aa31LG1G13310 Aethionema arabicum HOM05D006712 ORTHO05D008219 2.1e-56 223.8 387 39.3
Oeu009041.1 Olea europaea HOM05D006712 ORTHO05D008219 2.8e-56 223.4 373 39.7
Carub.0006s1976 Capsella rubella HOM05D006712 ORTHO05D008219 4.8e-56 222.6 376 41.5
Nitab4.5_0000380g0060 Nicotiana tabacum HOM05D006712 ORTHO05D008219 1.1e-55 221.5 415 40.5
Peaxi162Scf00098g00079 Petunia axillaris HOM05D006712 ORTHO05D008219 5.3e-55 219.2 354 43.5
Cc01_g07690 Coffea canephora HOM05D006712 ORTHO05D008219 3.8e-53 213.0 390 38.5
Os01g0965600 Oryza sativa ssp. japonica HOM05D006712 ORTHO05D008219 3.2e-52 209.9 246 48.0
MBI17_g02433_MAGBIO Magnolia biondii HOM05D006712 ORTHO05D008219 1.8e-50 204.1 402 36.6
Cpa.g.sc103.11 Carica papaya HOM05D006712 ORTHO05D008219 1.1e-49 201.4 322 41.9
Gohir.D09G098800 Gossypium hirsutum HOM05D006712 ORTHO05D008219 1.6e-48 197.6 241 48.5
unitig_27.g25124 Utricularia gibba HOM05D006712 ORTHO05D008219 4.8e-48 196.1 374 37.7
MD14G1087800 Malus domestica HOM05D006712 ORTHO05D008219 1.4e-44 184.5 246 45.1
HanXRQChr04g0096771 Helianthus annuus HOM05D006712 ORTHO05D008219 4.2e-44 183.0 241 46.1
vmacro03955 Vaccinium macrocarpon HOM05D006712 ORTHO05D008219 7.2e-44 182.2 468 34.4
Nn6g34683 Nelumbo nucifera HOM05D006712 ORTHO05D008219 4.6e-43 179.5 390 34.9
CDE06G0581 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 6.1e-43 179.1 374 35.3
GSVIVG01037582001 Vitis vinifera HOM05D006712 ORTHO05D008219 7.9e-43 178.7 245 44.5
Lsat_1_v5_gn_2_34521 Lactuca sativa HOM05D006712 ORTHO05D008219 8.7e-42 175.3 254 44.1
Actinidia24254 Actinidia chinensis HOM05D006712 ORTHO05D008219 3.3e-41 173.3 384 37.5
Pp3c7_620 Physcomitrium patens HOM05D006712 ORTHO05D008219 1.3e-40 171.4 386 35.0
SEGI_35195 Sequoiadendron giganteum HOM05D006712 ORTHO05D008219 1.6e-40 171.0 242 42.6
FvH4_3g26410 Fragaria vesca HOM05D006712 ORTHO05D008219 4.8e-40 169.5 358 37.7
Migut.N02451 Erythranthe guttata HOM05D006712 ORTHO05D008219 6.3e-40 169.1 281 40.2
Sabra16G0127200 Salix brachista HOM05D006712 ORTHO05D008219 1.4e-39 167.9 264 40.9
QL01p019587 Quercus lobata HOM05D006712 ORTHO05D008219 3.1e-39 166.8 146 58.2
SMO119G0218 Selaginella moellendorffii HOM05D006712 ORTHO05D008219 9.0e-39 165.2 342 36.0
GSVIVG01024643001 Vitis vinifera HOM05D006712 ORTHO05D008219 9.0e-39 165.2 244 42.6
ATR0772G163 Amborella trichopoda HOM05D006712 ORTHO05D008219 4.5e-38 162.9 275 37.1
SGA_v2.0_scaffold92G28138 Striga asiatica HOM05D006712 ORTHO05D008219 4.5e-38 162.9 345 38.0
Thhalv10013868m.g Eutrema salsugineum HOM05D006712 ORTHO05D008219 2.2e-37 160.6 334 35.9
Medtr4g051518 Medicago truncatula HOM05D006712 ORTHO05D008219 3.8e-37 159.8 286 38.1
Hma1.2p1_0101F.1_g049490 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 7.9e-35 152.1 240 43.8
Actinidia07277 Actinidia chinensis HOM05D006712 ORTHO05D008219 1.8e-34 151.0 253 42.7
Ah.15g099020 Amaranthus hybridus HOM05D006712 ORTHO05D008219 1.8e-34 151.0 288 38.5
Psat7g204400 Pisum sativum HOM05D006712 ORTHO05D008219 6.7e-34 149.1 301 37.2
SHI25255 Sapria himalayana HOM05D000265 ORTHO05D000161 6.7e-34 149.1 237 41.4
Mapoly0027s0100 Marchantia polymorpha HOM05D006712 ORTHO05D008219 8.8e-34 148.7 385 31.2
BcaB08g36451 Brassica carinata HOM05D002527 ORTHO05D008219 2.2e-32 144.1 256 37.9
ECA238G0730 Erigeron canadensis HOM05D006712 ORTHO05D008219 4.8e-32 142.9 242 39.7
Haze_23559 Corylus avellana HOM05D006712 ORTHO05D008219 6.9e-31 139.0 260 38.5
BcaC04g19542 Brassica carinata HOM05D006712 ORTHO05D008219 1.5e-30 137.9 242 40.9
TPR.G4637 Trifolium pratense HOM05D006712 ORTHO05D008219 4.5e-30 136.3 319 35.1
AagrBONN_evm.TU.Sc2ySwM_117.1746 Anthoceros agrestis HOM05D006712 ORTHO05D008219 3.0e-26 123.6 242 35.5
QL01p019597 Quercus lobata HOM05D006712 ORTHO05D008219 1.1e-23 115.2 221 41.2
Prupe.7G038700 Prunus persica HOM05D006712 ORTHO05D008219 1.7e-21 107.8 240 35.8
Thecc.09G272200 Theobroma cacao HOM05D006712 ORTHO05D008219 3.2e-20 103.6 158 41.1
BraA10t43946Z Brassica rapa HOM05D006712 ORTHO05D008219 8.0e-19 99.0 199 37.2
C09p54580 Brassica napus HOM05D006712 ORTHO05D008219 1.1e-17 95.1 147 43.5
BolC9t58325H Brassica oleracea HOM05D006712 ORTHO05D008219 1.1e-17 95.1 147 43.5
ATR0772G219 Amborella trichopoda HOM05D006712 ORTHO05D008219 1.5e-17 94.7 99 53.5
CBR_g40336 Chara braunii HOM05D006712 ORTHO05D008219 2.6e-17 94.0 278 28.1
BcaC04g19541 Brassica carinata HOM05D002527 ORTHO05D002865 9.1e-15 85.5 92 53.3
A10p18660 Brassica napus HOM05D002527 ORTHO05D002865 1.6e-14 84.7 175 35.4
Sabra16G0127300 Salix brachista HOM05D006712 ORTHO05D008219 3.2e-12 77.0 66 65.2
Medtr4g051435 Medicago truncatula HOM05D000445 ORTHO05D000314 8.0e-11 72.4 98 41.8
FAN21G2251 Fragaria x ananassa HOM05D006712 ORTHO05D008219 1.5e-09 68.2 61 57.4
CDE07G1644 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 2.2e-08 64.3 60 58.3
Duzib170G0178 Durio zibethinus HOM05D006712 ORTHO05D008219 4.1e-07 60.1 92 38.0
BcaC01g06603 Brassica carinata HOM05D006712 ORTHO05D008219 3.5e-06 57.0 73 46.6


User provided reference genes

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