Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_002605 Vanilla planifolia HOM05D046274 ORTHO05D004281 1.6e-202 709.1 352 100.0
HPP92_002730 Vanilla planifolia HOM05D046274 ORTHO05D004281 1.1e-161 573.5 315 91.7
MBI11_g13553_MAGBIO Magnolia biondii HOM05D003611 ORTHO05D004281 6.4e-29 132.5 397 32.5
Duzib133G0517 Durio zibethinus HOM05D003611 ORTHO05D004281 8.3e-29 132.1 422 30.8
Os06g0105900 Oryza sativa ssp. japonica HOM05D003611 ORTHO05D004281 2.4e-28 130.6 394 29.7
Cfa003881 Carpinus fangiana HOM05D003611 ORTHO05D004281 1.2e-27 128.3 414 30.2
CSS0009973 Camellia sinensis var. sinensis HOM05D003611 ORTHO05D004281 1.6e-27 127.9 411 32.4
Nn1g01656 Nelumbo nucifera HOM05D003611 ORTHO05D004281 2.0e-27 127.5 414 30.2
PSO782G0890 Papaver somniferum HOM05D003611 ORTHO05D004281 1.3e-26 124.8 412 29.6
TAR375G0370 Trochodendron aralioides HOM05D003611 ORTHO05D004281 2.3e-26 124.0 422 30.8
CiPaw.01G065700 Carya illinoinensis HOM05D003611 ORTHO05D004281 3.9e-26 123.2 428 31.3
Thecc.01G353800 Theobroma cacao HOM05D003611 ORTHO05D004281 6.6e-26 122.5 408 29.9
PSO478G2290 Papaver somniferum HOM05D003611 ORTHO05D004281 1.9e-25 120.9 413 28.8
QL04p055101 Quercus lobata HOM05D003611 ORTHO05D004281 3.3e-25 120.2 425 31.3
Dinv43856 Davidia involucrata HOM05D003611 ORTHO05D004281 3.6e-24 116.7 410 31.2
Zm00001eb374330 Zea mays HOM05D003611 ORTHO05D004281 5.2e-23 112.8 382 31.9
Aqoxy7G00231 Aquilegia oxysepala HOM05D003611 ORTHO05D004281 1.2e-22 111.7 401 29.7
COL.COLO4_12765 Corchorus olitorius HOM05D003611 ORTHO05D004281 1.5e-22 111.3 417 30.2
AUR62022609 Chenopodium quinoa HOM05D003611 ORTHO05D004281 3.4e-22 110.2 401 30.4
Gohir.A11G091600 Gossypium hirsutum HOM05D003611 ORTHO05D004281 3.4e-22 110.2 411 29.4
Nitab4.5_0010703g0040 Nicotiana tabacum HOM05D003611 ORTHO05D004281 5.8e-22 109.4 390 31.5
AUR62004403 Chenopodium quinoa HOM05D003611 ORTHO05D004281 1.7e-21 107.8 404 30.4
Gohir.A11G091700 Gossypium hirsutum HOM05D003611 ORTHO05D004281 1.7e-21 107.8 398 29.9
Hund27250 Selenicereus undatus HOM05D003611 ORTHO05D004281 2.9e-21 107.1 400 32.0
MSTRG.20858 Avicennia marina HOM05D003611 ORTHO05D004281 1.9e-20 104.4 380 28.2
Manes.05G030300 Manihot esculenta HOM05D003611 ORTHO05D004281 2.4e-20 104.0 389 30.6
Hma1.2p1_0627F.1_g191700 Hydrangea macrophylla HOM05D003611 ORTHO05D004281 5.4e-20 102.8 399 30.6
Gorai.007G102800 Gossypium raimondii HOM05D003611 ORTHO05D004281 7.0e-20 102.4 417 29.0
VMungo1383G2804 Vigna mungo HOM05D003611 ORTHO05D004281 3.5e-19 100.1 391 30.4
Ca_00818_v3 Cicer arietinum L. HOM05D003611 ORTHO05D004281 4.6e-19 99.8 408 29.4
Peaxi162Scf00020g01228 Petunia axillaris HOM05D003611 ORTHO05D004281 4.6e-19 99.8 402 30.1
Prupe.2G176000 Prunus persica HOM05D003611 ORTHO05D004281 4.6e-19 99.8 421 28.3
CiPaw.02G033900 Carya illinoinensis HOM05D003611 ORTHO05D004281 6.0e-19 99.4 404 31.4
Glyma.09G255400 Glycine max HOM05D003611 ORTHO05D004281 6.0e-19 99.4 411 30.9
Haze_15553 Corylus avellana HOM05D003611 ORTHO05D004281 7.8e-19 99.0 376 28.7
Sopen01g038800 Solanum pennellii HOM05D003611 ORTHO05D004281 7.8e-19 99.0 400 28.0
CSS0038908 Camellia sinensis var. sinensis HOM05D003611 ORTHO05D004281 1.0e-18 98.6 405 29.9
Actinidia18539 Actinidia chinensis HOM05D003611 ORTHO05D004281 1.3e-18 98.2 393 28.5
EL10Ac1g00365 Beta vulgaris HOM05D003611 ORTHO05D004281 1.3e-18 98.2 400 30.0
Solyc01g095020.3 Solanum lycopersicum HOM05D003611 ORTHO05D004281 1.7e-18 97.8 398 28.4
Potri.014G089200 Populus trichocarpa HOM05D003611 ORTHO05D004281 2.3e-18 97.4 392 28.3
Gohir.D11G096500 Gossypium hirsutum HOM05D003611 ORTHO05D004281 5.0e-18 96.3 399 28.6
Phvul.008G059100 Phaseolus vulgaris HOM05D003611 ORTHO05D004281 5.0e-18 96.3 403 29.5
RcHm_v2.0_Chr1g0357311 Rosa chinensis HOM05D003611 ORTHO05D004281 8.6e-18 95.5 424 29.2
Sabra14G0064800 Salix brachista HOM05D003611 ORTHO05D004281 8.6e-18 95.5 392 28.6
Cpa.g.sc184.26 Carica papaya HOM05D003611 ORTHO05D004281 1.1e-17 95.1 386 29.8
PGR042G1491 Punica granatum HOM05D003611 ORTHO05D004281 1.1e-17 95.1 387 28.7
TWI14G0836 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 1.5e-17 94.7 387 30.7
TWI59G0398 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 1.5e-17 94.7 403 29.0
Gohir.D11G096300 Gossypium hirsutum HOM05D003611 ORTHO05D004281 1.9e-17 94.4 413 29.1
Sc23g0002620 Simmondsia chinensis HOM05D003611 ORTHO05D004281 1.9e-17 94.4 376 31.1
Peaxi162Scf00585g00319 Petunia axillaris HOM05D003611 ORTHO05D004281 2.5e-17 94.0 394 26.1
Hund16671 Selenicereus undatus HOM05D003611 ORTHO05D004281 5.6e-17 92.8 408 29.4
arahy.Tifrunner.gnm1.ann1.9C73IW Arachis hypogaea HOM05D003611 ORTHO05D004281 1.2e-16 91.7 407 29.2
Cc02_g38450 Coffea canephora HOM05D003611 ORTHO05D004281 1.2e-16 91.7 403 27.8
Potri.002G163000 Populus trichocarpa HOM05D003611 ORTHO05D004281 1.2e-16 91.7 409 27.9
Rhsim07G0011300 Rhododendron simsii HOM05D003611 ORTHO05D004281 1.2e-16 91.7 381 29.4
Ciclev10018621m.g Citrus clementina HOM05D003611 ORTHO05D004281 2.1e-16 90.9 384 28.1
Eucgr.E00101 Eucalyptus grandis HOM05D003611 ORTHO05D004281 2.1e-16 90.9 415 28.2
DCAR_008631 Daucus carota HOM05D003611 ORTHO05D004281 2.8e-16 90.5 405 28.1
Duzib138G0252 Durio zibethinus HOM05D003611 ORTHO05D004281 3.6e-16 90.1 322 29.5
Medtr7g078820 Medicago truncatula HOM05D003611 ORTHO05D004281 3.6e-16 90.1 409 26.9
SalBow3G3040 Salvia bowleyana HOM05D003611 ORTHO05D004281 3.6e-16 90.1 417 29.0
TWI23G0144 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 3.6e-16 90.1 397 29.2
Glyma.18G237600 Glycine max HOM05D003611 ORTHO05D004281 6.2e-16 89.4 406 29.3
Lj1g0014988 Lotus japonicus HOM05D003611 ORTHO05D004281 8.1e-16 89.0 401 27.4
MD07G1132600 Malus domestica HOM05D003611 ORTHO05D004281 1.4e-15 88.2 375 26.9
arahy.Tifrunner.gnm1.ann1.I9FVBP Arachis hypogaea HOM05D003611 ORTHO05D004281 1.8e-15 87.8 407 29.2
TPR.G22300 Trifolium pratense HOM05D003611 ORTHO05D004281 1.8e-15 87.8 401 28.7
Psat3g107120 Pisum sativum HOM05D003611 ORTHO05D004281 2.3e-15 87.4 395 27.8
TAR374G0905 Trochodendron aralioides HOM05D003611 ORTHO05D004281 3.1e-15 87.0 203 36.9
Sabra02G0147500 Salix brachista HOM05D003611 ORTHO05D004281 4.0e-15 86.7 409 26.9
MD01G1069900 Malus domestica HOM05D003611 ORTHO05D004281 5.2e-15 86.3 412 26.7
Nitab4.5_0000690g0050 Nicotiana tabacum HOM05D003611 ORTHO05D004281 8.9e-15 85.5 389 28.3
Migut.B01791 Erythranthe guttata HOM05D003611 ORTHO05D004281 2.6e-14 84.0 378 27.2
Ah.05g180230 Amaranthus hybridus HOM05D003611 ORTHO05D007544 3.4e-14 83.6 398 29.6
FAN03G1353 Fragaria x ananassa HOM05D003611 ORTHO05D004281 5.8e-14 82.8 418 28.5
CANSAT56G4470 Cannabis sativa HOM05D003611 ORTHO05D004281 7.5e-14 82.4 387 28.4
FAN01G0094 Fragaria x ananassa HOM05D003611 ORTHO05D004281 1.3e-13 81.6 424 28.8
Atru.chr5.552 Acer truncatum HOM05D003611 ORTHO05D004281 1.7e-13 81.3 389 26.2
MELO3C006087.2 Cucumis melo HOM05D003611 ORTHO05D004281 2.2e-13 80.9 404 26.5
Nitab4.5_0000200g0170 Nicotiana tabacum HOM05D003611 ORTHO05D004281 2.2e-13 80.9 395 27.1
Lj7A508G38 Lonicera japonica HOM05D003611 ORTHO05D004281 3.7e-13 80.1 402 28.4
vmacro13239 Vaccinium macrocarpon HOM05D003611 ORTHO05D004281 3.7e-13 80.1 432 28.0
Solyc10g012030.4 Solanum lycopersicum HOM05D003611 ORTHO05D004281 4.9e-13 79.7 360 28.6
FAN06G4234 Fragaria x ananassa HOM05D003611 ORTHO05D004281 8.3e-13 79.0 421 27.8
FAN10G1370 Fragaria x ananassa HOM05D003611 ORTHO05D004281 8.3e-13 79.0 427 28.1
FAN10G4104 Fragaria x ananassa HOM05D003611 ORTHO05D004281 8.3e-13 79.0 424 29.0
Gorai.007G102600 Gossypium raimondii HOM05D003611 ORTHO05D004281 1.1e-12 78.6 404 27.2
FvH4_7g15120 Fragaria vesca HOM05D003611 ORTHO05D004281 1.4e-12 78.2 421 27.8
FAN06G0771 Fragaria x ananassa HOM05D003611 ORTHO05D004281 1.4e-12 78.2 418 28.0
Lalb_Chr04g0259241 Lupinus albus HOM05D003611 ORTHO05D004281 2.4e-12 77.4 377 26.3
ClCG05G001310 Citrullus lanatus HOM05D003611 ORTHO05D004281 3.2e-12 77.0 406 26.6
Manes.01G253100 Manihot esculenta HOM05D003611 ORTHO05D004281 3.2e-12 77.0 390 27.2
Sopen10g005780 Solanum pennellii HOM05D003611 ORTHO05D004281 3.2e-12 77.0 365 29.0
Actinidia02822 Actinidia chinensis HOM05D003611 ORTHO05D004281 1.2e-11 75.1 190 35.8
TAR374G1053 Trochodendron aralioides HOM05D003611 ORTHO05D004281 2.1e-11 74.3 132 39.4
Actinidia20152 Actinidia chinensis HOM05D003611 ORTHO05D004281 3.5e-11 73.6 379 24.5
Lalb_Chr04g0259231 Lupinus albus HOM05D003611 ORTHO05D004281 4.6e-11 73.2 371 26.4
CsaV3_3G008680 Cucumis sativus L. HOM05D003611 ORTHO05D004281 1.0e-10 72.0 403 25.8
Sed0010511 Sechium edule HOM05D003611 ORTHO05D004281 1.3e-10 71.6 404 24.3
CDE09G0589 Ceratophyllum demersum HOM05D003611 ORTHO05D004281 1.7e-10 71.2 350 26.0
Sed0009698 Sechium edule HOM05D003611 ORTHO05D004281 1.7e-10 71.2 401 27.2
Sc01g0003270 Simmondsia chinensis HOM05D003611 ORTHO05D004281 1.1e-09 68.6 364 26.6
Dinv32512 Davidia involucrata HOM05D003611 ORTHO05D004281 1.9e-09 67.8 288 27.4
Oeu018963.2 Olea europaea HOM05D003611 ORTHO05D004281 1.9e-09 67.8 358 26.0
Actinidia10062 Actinidia chinensis HOM05D003611 ORTHO05D004281 3.3e-09 67.0 170 32.4
ATR0661G469 Amborella trichopoda HOM05D003611 ORTHO05D004281 4.3e-09 66.6 432 24.5
ECA234G2210 Erigeron canadensis HOM05D003611 ORTHO05D004281 3.6e-08 63.5 391 26.3
Lalb_Chr10g0096711 Lupinus albus HOM05D003611 ORTHO05D004281 3.6e-08 63.5 370 24.1
MSTRG.4840 Avicennia marina HOM05D003611 ORTHO05D004281 1.8e-07 61.2 395 26.1
Hma1.2p1_0623F.1_g191005 Hydrangea macrophylla HOM05D003611 ORTHO05D004281 1.8e-07 61.2 115 37.4
Lalb_Chr17g0339111 Lupinus albus HOM05D003611 ORTHO05D004281 1.8e-07 61.2 378 24.1
HanXRQChr17g0562341 Helianthus annuus HOM05D003611 ORTHO05D004281 3.1e-07 60.5 366 26.0
Oeu015220.3 Olea europaea HOM05D003611 ORTHO05D004281 3.1e-07 60.5 341 27.6
CDE11G0274 Ceratophyllum demersum HOM05D003611 ORTHO05D004281 4.0e-07 60.1 360 25.8
DCAR_006945 Daucus carota HOM05D003611 ORTHO05D004281 4.0e-07 60.1 398 27.1


User provided reference genes

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