Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_002565 Vanilla planifolia HOM05D004157 ORTHO05D004860 1.0e-99 366.7 178 100.0
HPP92_002547 Vanilla planifolia HOM05D004157 ORTHO05D004860 5.1e-19 98.6 189 41.8
Aqoxy5G01458 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 8.5e-14 81.3 188 36.2
Nn5g30153 Nelumbo nucifera HOM05D004157 ORTHO05D004860 8.5e-14 81.3 188 37.2
Duzib132G0743 Durio zibethinus HOM05D004157 ORTHO05D004860 1.1e-13 80.9 101 49.5
Duzib052G0280 Durio zibethinus HOM05D004157 ORTHO05D004860 2.5e-13 79.7 98 52.0
Ciclev10029225m.g Citrus clementina HOM05D004157 ORTHO05D004860 1.2e-12 77.4 96 51.0
EL10Ac9g21458 Beta vulgaris HOM05D004157 ORTHO05D004860 2.1e-12 76.6 184 34.2
unitig_21.g20017 Utricularia gibba HOM05D004157 ORTHO05D004860 2.7e-12 76.3 184 34.8
HanXRQChr11g0346651 Helianthus annuus HOM05D004157 ORTHO05D004860 3.6e-12 75.9 123 41.5
Hma1.2p1_1385F.1_g279670 Hydrangea macrophylla HOM05D004157 ORTHO05D004860 4.7e-12 75.5 123 41.5
Gohir.A03G202800 Gossypium hirsutum HOM05D004157 ORTHO05D004860 6.1e-12 75.1 123 43.1
Gorai.005G251900 Gossypium raimondii HOM05D004157 ORTHO05D004860 6.1e-12 75.1 123 43.1
Gohir.D02G224100 Gossypium hirsutum HOM05D004157 ORTHO05D004860 8.0e-12 74.7 123 43.1
QL11p047455 Quercus lobata HOM05D004157 ORTHO05D004860 1.0e-11 74.3 123 43.1
Hund00051 Selenicereus undatus HOM05D004157 ORTHO05D004860 1.0e-11 74.3 123 41.5
Aqoxy2G00577 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 1.4e-11 73.9 123 41.5
Os06g0112200 Oryza sativa ssp. japonica HOM05D004157 ORTHO05D004860 2.3e-11 73.2 123 42.3
PGR042G1356 Punica granatum HOM05D004157 ORTHO05D004860 5.2e-11 72.0 126 41.3
ATR0089G001 Amborella trichopoda HOM05D004157 ORTHO05D004860 8.8e-11 71.2 123 41.5
ATR0095G001 Amborella trichopoda HOM05D004157 ORTHO05D004860 8.8e-11 71.2 123 41.5
Migut.I00211 Erythranthe guttata HOM05D004157 ORTHO05D004860 8.8e-11 71.2 126 40.5
AUR62013103 Chenopodium quinoa HOM05D004157 ORTHO05D004860 1.1e-10 70.9 123 41.5
Eucgr.G01748 Eucalyptus grandis HOM05D004157 ORTHO05D004860 1.1e-10 70.9 123 42.3
PSO541G6022 Papaver somniferum HOM05D004157 ORTHO05D004860 1.1e-10 70.9 123 43.1
Potri.004G167200 Populus trichocarpa HOM05D004157 ORTHO05D004860 1.1e-10 70.9 123 40.7
PGR142G1140 Punica granatum HOM05D004157 ORTHO05D004860 1.1e-10 70.9 123 41.5
COL.COLO4_17245 Corchorus olitorius HOM05D004157 ORTHO05D004860 1.5e-10 70.5 123 40.7
ECA234G4736 Erigeron canadensis HOM05D004157 ORTHO05D004860 1.5e-10 70.5 123 40.7
Eucgr.G01749 Eucalyptus grandis HOM05D004157 ORTHO05D004860 1.5e-10 70.5 125 40.8
Actinidia00586 Actinidia chinensis HOM05D004157 ORTHO05D004860 2.0e-10 70.1 123 39.8
Lj9A389T64 Lonicera japonica HOM05D004157 ORTHO05D004860 2.0e-10 70.1 123 39.8
Oeu002957.1 Olea europaea HOM05D004157 ORTHO05D004860 2.0e-10 70.1 123 40.7
CANSAT25G0852 Cannabis sativa HOM05D004157 ORTHO05D004860 2.6e-10 69.7 123 39.8
Sc18g0006720 Simmondsia chinensis HOM05D004157 ORTHO05D004860 2.6e-10 69.7 126 38.9
Solyc01g111060.4 Solanum lycopersicum HOM05D004157 ORTHO05D004860 2.6e-10 69.7 123 39.8
SGA_v2.0_scaffold80G25867 Striga asiatica HOM05D004157 ORTHO05D004860 2.6e-10 69.7 126 40.5
TAR381G0601 Trochodendron aralioides HOM05D004157 ORTHO05D004860 2.6e-10 69.7 123 39.8
FvH4_2g02150 Fragaria vesca HOM05D004157 ORTHO05D004860 3.3e-10 69.3 123 39.8
FAN20G1131 Fragaria x ananassa HOM05D004157 ORTHO05D004860 3.3e-10 69.3 123 39.8
FAN24G0875 Fragaria x ananassa HOM05D004157 ORTHO05D004860 3.3e-10 69.3 123 39.8
Cc02_g16620 Coffea canephora HOM05D004157 ORTHO05D004860 4.4e-10 68.9 123 39.0
DCAR_028937 Daucus carota HOM05D004157 ORTHO05D004860 4.4e-10 68.9 123 39.8
RcHm_v2.0_Chr6g0245651 Rosa chinensis HOM05D004157 ORTHO05D004860 4.4e-10 68.9 123 39.8
TWI75G1232 Tripterygium wilfordii HOM05D004157 ORTHO05D004860 4.4e-10 68.9 123 42.3
GSVIVG01024109001 Vitis vinifera HOM05D004157 ORTHO05D004860 4.4e-10 68.9 123 39.0
Atru.chr5.3210 Acer truncatum HOM05D004157 ORTHO05D004860 5.7e-10 68.6 123 39.8
Lsat_1_v5_gn_3_45521 Lactuca sativa HOM05D004157 ORTHO05D004860 5.7e-10 68.6 123 39.8
Phvul.009G000600 Phaseolus vulgaris HOM05D004157 ORTHO05D004860 5.7e-10 68.6 123 40.7
Sopen01g053120 Solanum pennellii HOM05D004157 ORTHO05D004860 5.7e-10 68.6 123 39.0
PGSC0003DMG400001636 Solanum tuberosum HOM05D004157 ORTHO05D004860 5.7e-10 68.6 123 39.0
Thecc.02G068100 Theobroma cacao HOM05D004157 ORTHO05D004860 5.7e-10 68.6 126 40.5
Oeu055643.1 Olea europaea HOM05D004157 ORTHO05D004860 7.4e-10 68.2 123 39.0
PSO541G4423 Papaver somniferum HOM05D004157 ORTHO05D004860 7.4e-10 68.2 123 40.7
TWI79G0156 Tripterygium wilfordii HOM05D004157 ORTHO05D004860 7.4e-10 68.2 123 40.7
ClCG02G004360 Citrullus lanatus HOM05D000447 ORTHO05D000315 9.7e-10 67.8 123 39.8
PSO675G3214 Papaver somniferum HOM05D004157 ORTHO05D004860 9.7e-10 67.8 123 40.7
vmacro22690 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 9.7e-10 67.8 123 39.0
MSTRG.5432 Avicennia marina HOM05D004157 ORTHO05D004860 1.3e-09 67.4 126 39.7
DCAR_003693 Daucus carota HOM05D004157 ORTHO05D004860 1.3e-09 67.4 123 39.8
CAN.G588.18 Capsicum annuum HOM05D004157 ORTHO05D004860 1.7e-09 67.0 123 39.0
CiPaw.06G125600 Carya illinoinensis HOM05D000447 ORTHO05D000315 1.7e-09 67.0 123 40.7
PSO675G5417 Papaver somniferum HOM05D004157 ORTHO05D004860 1.7e-09 67.0 123 39.8
PGR042G2276 Punica granatum HOM05D004157 ORTHO05D004860 1.7e-09 67.0 101 44.6
Sabra09G0098500 Salix brachista HOM05D004157 ORTHO05D004860 1.7e-09 67.0 123 38.2
Sed0001494 Sechium edule HOM05D000447 ORTHO05D000315 1.7e-09 67.0 123 40.7
AL7G10670 Arabidopsis lyrata HOM05D004157 ORTHO05D004860 2.2e-09 66.6 123 37.4
CARHR243130 Cardamine hirsuta HOM05D004157 ORTHO05D004860 2.2e-09 66.6 122 37.7
MD10G1116600 Malus domestica HOM05D004157 ORTHO05D004860 2.2e-09 66.6 123 39.8
Medtr3g117700 Medicago truncatula HOM05D004157 ORTHO05D004860 2.2e-09 66.6 123 37.4
Peaxi162Scf00362g01054 Petunia axillaris HOM05D004157 ORTHO05D004860 2.2e-09 66.6 123 39.8
Psat5g003520 Pisum sativum HOM05D004157 ORTHO05D004860 2.2e-09 66.6 123 40.7
Prupe.8G159400 Prunus persica HOM05D004157 ORTHO05D004860 2.2e-09 66.6 126 39.7
unitig_0.g2353 Utricularia gibba HOM05D004157 ORTHO05D004860 2.2e-09 66.6 126 38.9
VMungo1309G1201 Vigna mungo HOM05D004157 ORTHO05D004860 2.2e-09 66.6 123 39.0
AT4G38800 Arabidopsis thaliana HOM05D004157 ORTHO05D004860 3.7e-09 65.9 123 37.4
MELO3C013382.2 Cucumis melo HOM05D004157 ORTHO05D004860 3.7e-09 65.9 123 39.8
CsaV3_7G000760 Cucumis sativus L. HOM05D004157 ORTHO05D004860 3.7e-09 65.9 123 39.8
Glyma.04G005900 Glycine max HOM05D004157 ORTHO05D004860 3.7e-09 65.9 123 39.0
HanXRQChr10g0294891 Helianthus annuus HOM05D004157 ORTHO05D004860 3.7e-09 65.9 123 39.8
Rhsim05G0063700 Rhododendron simsii HOM05D004157 ORTHO05D004860 3.7e-09 65.9 136 36.0
Aa31LG6G16410 Aethionema arabicum HOM05D004157 ORTHO05D004860 4.8e-09 65.5 123 36.6
Ah.01g009470 Amaranthus hybridus HOM05D004157 ORTHO05D004860 4.8e-09 65.5 123 39.0
Carub.0007s0065 Capsella rubella HOM05D004157 ORTHO05D004860 4.8e-09 65.5 123 37.4
Lalb_Chr11g0061251 Lupinus albus HOM05D004157 ORTHO05D004860 4.8e-09 65.5 123 37.4
Manes.04G078800 Manihot esculenta HOM05D004157 ORTHO05D004860 4.8e-09 65.5 123 39.0
Actinidia32087 Actinidia chinensis HOM05D004157 ORTHO05D004860 6.3e-09 65.1 123 37.4
AT4G34840 Arabidopsis thaliana HOM05D004157 ORTHO05D004860 6.3e-09 65.1 122 36.9
BcaB03g11807 Brassica carinata HOM05D004157 ORTHO05D004860 6.3e-09 65.1 122 37.7
Ca_15317_v3 Cicer arietinum L. HOM05D000600 ORTHO05D004860 6.3e-09 65.1 123 38.2
Lsat_1_v5_gn_1_62181 Lactuca sativa HOM05D004157 ORTHO05D004860 6.3e-09 65.1 122 38.5
Lj5A185T60 Lonicera japonica HOM05D004157 ORTHO05D004860 6.3e-09 65.1 123 38.2
Sed0017382 Sechium edule HOM05D004157 ORTHO05D004860 6.3e-09 65.1 123 39.8
BcaC01g00866 Brassica carinata HOM05D004157 ORTHO05D004860 8.2e-09 64.7 122 37.7
A08p16520 Brassica napus HOM05D004157 ORTHO05D004860 8.2e-09 64.7 122 37.7
C03p85360 Brassica napus HOM05D004157 ORTHO05D004860 8.2e-09 64.7 122 37.7
BolC3t20826H Brassica oleracea HOM05D004157 ORTHO05D004860 8.2e-09 64.7 122 37.7
Glyma.06G005600 Glycine max HOM05D004157 ORTHO05D004860 8.2e-09 64.7 123 38.2
Lj1g0011325 Lotus japonicus HOM05D004157 ORTHO05D004860 8.2e-09 64.7 123 37.4
Sp7g37020 Schrenkiella parvula HOM05D004157 ORTHO05D004860 8.2e-09 64.7 123 37.4
TPR.G38481 Trifolium pratense HOM05D004157 ORTHO05D004860 8.2e-09 64.7 123 37.4
AL7G16370 Arabidopsis lyrata HOM05D004157 ORTHO05D004860 1.1e-08 64.3 122 36.9
Carub.0007s0546 Capsella rubella HOM05D004157 ORTHO05D004860 1.1e-08 64.3 122 36.9
SHI05673 Sapria himalayana HOM05D004157 ORTHO05D004860 1.1e-08 64.3 123 39.0
arahy.Tifrunner.gnm1.ann1.391TM2 Arachis hypogaea HOM05D004157 ORTHO05D004860 1.4e-08 63.9 123 36.6
arahy.Tifrunner.gnm1.ann1.66CLCN Arachis hypogaea HOM05D004157 ORTHO05D004860 1.4e-08 63.9 123 36.6
Thhalv10025990m.g Eutrema salsugineum HOM05D004157 ORTHO05D004860 1.4e-08 63.9 123 37.4
Thhalv10026821m.g Eutrema salsugineum HOM05D004157 ORTHO05D004860 1.4e-08 63.9 123 36.6
Zm00001eb036610 Zea mays HOM05D004157 ORTHO05D004860 1.4e-08 63.9 121 38.8
vmacro17385 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 1.8e-08 63.5 123 37.4
BcaC01g00256 Brassica carinata HOM05D004157 ORTHO05D004860 2.4e-08 63.2 123 36.6
A08p24000 Brassica napus HOM05D004157 ORTHO05D004860 2.4e-08 63.2 123 36.6
C03p77330 Brassica napus HOM05D004157 ORTHO05D004860 2.4e-08 63.2 123 36.6
BolC3t19986H Brassica oleracea HOM05D004157 ORTHO05D004860 2.4e-08 63.2 123 36.6
BraA08t34357Z Brassica rapa HOM05D004157 ORTHO05D004860 2.4e-08 63.2 123 36.6
CARHR247930 Cardamine hirsuta HOM05D004157 ORTHO05D004860 2.4e-08 63.2 123 36.6
THA.LOC104807783 Tarenaya hassleriana HOM05D004157 ORTHO05D004860 4.1e-08 62.4 123 35.8
Sp7g32610 Schrenkiella parvula HOM05D004157 ORTHO05D004860 5.3e-08 62.0 122 36.1
BraA08t33620Z Brassica rapa HOM05D004157 ORTHO05D004860 7.0e-08 61.6 102 40.2
Nitab4.5_0000283g0220 Nicotiana tabacum HOM05D004157 ORTHO05D004860 9.1e-08 61.2 131 36.6
Cfa005173 Carpinus fangiana HOM05D004157 ORTHO05D004860 1.2e-07 60.8 123 36.6
SGA_v2.0_scaffold32G13240 Striga asiatica HOM05D004157 ORTHO05D004860 1.2e-07 60.8 123 35.8
vmacro02241 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 1.2e-07 60.8 130 36.9
VMungo1309G1253 Vigna mungo HOM05D004157 ORTHO05D004860 1.6e-07 60.5 123 36.6
THA.LOC104819635 Tarenaya hassleriana HOM05D004157 ORTHO05D004860 2.0e-07 60.1 122 34.4
BcaB03g12226 Brassica carinata HOM05D004157 ORTHO05D004860 2.6e-07 59.7 123 34.1
Glyma.06G005700 Glycine max HOM05D004157 ORTHO05D004860 2.6e-07 59.7 123 35.8
PGR042G3985 Punica granatum HOM05D004157 ORTHO05D004860 2.6e-07 59.7 123 38.2
Zm00001eb175180 Zea mays HOM05D004157 ORTHO05D004860 2.6e-07 59.7 121 37.2
Aa31LG2G15700 Aethionema arabicum HOM05D004157 ORTHO05D004860 7.7e-07 58.2 123 34.1
Potri.009G128700 Populus trichocarpa HOM05D004157 ORTHO05D004860 7.7e-07 58.2 102 38.2
Phvul.009G000700 Phaseolus vulgaris HOM05D004157 ORTHO05D004860 1.0e-06 57.8 123 35.8
CDE02G2528 Ceratophyllum demersum HOM05D004157 ORTHO05D004860 1.7e-06 57.0 46 67.4
MBI09_g11914_MAGBIO Magnolia biondii HOM05D004157 ORTHO05D004860 3.8e-06 55.8 46 60.9
TAR625G0759 Trochodendron aralioides HOM05D004157 ORTHO05D004860 8.5e-06 54.7 46 60.9


User provided reference genes

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