Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_002538 Vanilla planifolia HOM05D006938 ORTHO05D008600 1.1e-99 366.7 187 100.0
HPP92_002496 Vanilla planifolia HOM05D006938 ORTHO05D008600 1.4e-96 356.3 187 97.3
ECA246G5327 Erigeron canadensis HOM05D006938 ORTHO05D008600 6.3e-44 181.4 136 67.6
Manes.10G035800 Manihot esculenta HOM05D006938 ORTHO05D008600 6.3e-44 181.4 109 79.8
Actinidia11174 Actinidia chinensis HOM05D006938 ORTHO05D008600 8.3e-44 181.0 164 57.9
Eucgr.G00991 Eucalyptus grandis HOM05D006938 ORTHO05D008600 1.4e-43 180.3 158 60.1
Duzib084G0622 Durio zibethinus HOM05D006938 ORTHO05D008600 2.4e-43 179.5 129 69.0
SGA_v2.0_scaffold467G52037 Striga asiatica HOM05D006938 ORTHO05D008600 2.4e-43 179.5 144 65.3
Gorai.007G003100 Gossypium raimondii HOM05D006938 ORTHO05D008600 3.1e-43 179.1 106 81.1
Oeu024662.1 Olea europaea HOM05D006938 ORTHO05D008600 3.1e-43 179.1 113 77.0
SGA_v2.0_scaffold25G10864 Striga asiatica HOM05D006938 ORTHO05D008600 5.4e-43 178.3 115 77.4
TAR629G2816 Trochodendron aralioides HOM05D006938 ORTHO05D008600 5.4e-43 178.3 119 74.8
Gohir.A11G002500 Gossypium hirsutum HOM05D006938 ORTHO05D008600 9.1e-43 177.6 106 80.2
Gohir.D11G002100 Gossypium hirsutum HOM05D006938 ORTHO05D008600 9.1e-43 177.6 106 80.2
MBI06_g36504_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 9.1e-43 177.6 132 69.7
CiPaw.09G164200 Carya illinoinensis HOM05D006938 ORTHO05D008600 1.2e-42 177.2 118 72.0
Lj5g0002504 Lotus japonicus HOM05D006938 ORTHO05D008600 2.0e-42 176.4 132 68.2
PGR142G2203 Punica granatum HOM05D006938 ORTHO05D008600 2.0e-42 176.4 171 56.1
CSS0018133 Camellia sinensis var. sinensis HOM05D006938 ORTHO05D008600 2.7e-42 176.0 110 75.5
Cpa.g.sc51.44 Carica papaya HOM05D006938 ORTHO05D008600 2.7e-42 176.0 136 64.7
Dinv17599 Davidia involucrata HOM05D006938 ORTHO05D008600 2.7e-42 176.0 119 72.3
Glyma.20G172300 Glycine max HOM05D006938 ORTHO05D008600 2.7e-42 176.0 135 66.7
QL03p043666 Quercus lobata HOM05D006938 ORTHO05D008600 2.7e-42 176.0 110 76.4
Lsat_1_v5_gn_3_33800 Lactuca sativa HOM05D006938 ORTHO05D008600 3.5e-42 175.6 108 78.7
Potri.005G199000 Populus trichocarpa HOM05D006938 ORTHO05D008600 5.9e-42 174.9 118 72.9
Nn4g24932 Nelumbo nucifera HOM05D006938 ORTHO05D008600 7.7e-42 174.5 140 62.9
PSO478G3769 Papaver somniferum HOM05D006938 ORTHO05D008600 7.7e-42 174.5 141 65.2
Oeu022179.1 Olea europaea HOM05D006938 ORTHO05D008600 1.0e-41 174.1 101 83.2
Prupe.1G345500 Prunus persica HOM05D006938 ORTHO05D008600 1.0e-41 174.1 144 63.9
Thecc.03G060300 Theobroma cacao HOM05D006938 ORTHO05D008600 1.3e-41 173.7 133 63.9
Hma1.2p1_0232F.1_g097690 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 1.7e-41 173.3 108 76.9
MD13G1007500 Malus domestica HOM05D006938 ORTHO05D008600 1.7e-41 173.3 129 68.2
Medtr1g097270 Medicago truncatula HOM05D006938 ORTHO05D008600 1.7e-41 173.3 108 76.9
PGSC0003DMG400019837 Solanum tuberosum HOM05D006938 ORTHO05D008600 1.7e-41 173.3 106 79.2
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 2.3e-41 172.9 124 71.8
Potri.002G062100 Populus trichocarpa HOM05D006938 ORTHO05D008600 2.3e-41 172.9 117 72.6
Sp7g06080 Schrenkiella parvula HOM05D006938 ORTHO05D008600 2.3e-41 172.9 112 75.9
Atru.chr11.1233 Acer truncatum HOM05D006938 ORTHO05D008600 2.9e-41 172.6 140 60.7
Atru.chr11.1321 Acer truncatum HOM05D006938 ORTHO05D008600 2.9e-41 172.6 140 60.7
AL7G45100 Arabidopsis lyrata HOM05D006938 ORTHO05D008600 2.9e-41 172.6 172 54.1
AT5G36120 Arabidopsis thaliana HOM05D006938 ORTHO05D008600 2.9e-41 172.6 169 53.8
arahy.Tifrunner.gnm1.ann1.ZPRB1V Arachis hypogaea HOM05D006938 ORTHO05D008600 2.9e-41 172.6 107 76.6
Sabra02G0050200 Salix brachista HOM05D006938 ORTHO05D008600 2.9e-41 172.6 121 69.4
HanXRQChr17g0540771 Helianthus annuus HOM05D006938 ORTHO05D008600 3.8e-41 172.2 107 79.4
ClCG09G005720 Citrullus lanatus HOM05D006938 ORTHO05D008600 5.0e-41 171.8 108 75.9
FvH4_4g36740 Fragaria vesca HOM05D006938 ORTHO05D008600 5.0e-41 171.8 126 66.7
FAN12G4276 Fragaria x ananassa HOM05D006938 ORTHO05D008600 5.0e-41 171.8 126 66.7
FAN17G2681 Fragaria x ananassa HOM05D006938 ORTHO05D008600 5.0e-41 171.8 126 66.7
Lj6P721T41 Lonicera japonica HOM05D006938 ORTHO05D008600 5.0e-41 171.8 108 78.7
Rhsim06G0126000 Rhododendron simsii HOM05D006938 ORTHO05D008600 5.0e-41 171.8 110 76.4
BcaB02g08043 Brassica carinata HOM05D006938 ORTHO05D008600 6.6e-41 171.4 106 78.3
THA.LOC104805738 Tarenaya hassleriana HOM05D006938 ORTHO05D008600 6.6e-41 171.4 179 51.4
vmacro22268 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 6.6e-41 171.4 110 74.5
vmacro22787 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 6.6e-41 171.4 110 74.5
CAN.G157.8 Capsicum annuum HOM05D006938 ORTHO05D008600 8.6e-41 171.0 171 57.3
Ca_10639_v3 Cicer arietinum L. HOM05D006938 ORTHO05D008600 8.6e-41 171.0 104 78.8
Glyma.10G219400 Glycine max HOM05D006938 ORTHO05D008600 8.6e-41 171.0 133 66.9
Aqoxy3G04277 Aquilegia oxysepala HOM05D006938 ORTHO05D008600 1.1e-40 170.6 108 74.1
BcaC08g44319 Brassica carinata HOM05D006938 ORTHO05D008600 1.1e-40 170.6 106 77.4
A05p16420 Brassica napus HOM05D006938 ORTHO05D008600 1.1e-40 170.6 106 77.4
C06p17420 Brassica napus HOM05D006938 ORTHO05D008600 1.1e-40 170.6 106 77.4
BolC6t36937H Brassica oleracea HOM05D006938 ORTHO05D008600 1.1e-40 170.6 106 77.4
CANSAT64G2234 Cannabis sativa HOM05D006938 ORTHO05D008600 1.1e-40 170.6 104 76.9
Psat6g189200 Pisum sativum HOM05D006938 ORTHO05D008600 1.1e-40 170.6 104 79.8
Hund24283 Selenicereus undatus HOM05D006938 ORTHO05D008600 1.1e-40 170.6 107 77.6
Thhalv10005006m.g Eutrema salsugineum HOM05D006938 ORTHO05D008600 1.5e-40 170.2 106 77.4
Phvul.007G086000 Phaseolus vulgaris HOM05D006938 ORTHO05D008600 1.5e-40 170.2 104 77.9
RcHm_v2.0_Chr4g0446461 Rosa chinensis HOM05D006938 ORTHO05D008600 1.5e-40 170.2 126 65.9
Sopen02g005300 Solanum pennellii HOM05D006938 ORTHO05D008600 1.5e-40 170.2 106 78.3
TPR.G23154 Trifolium pratense HOM05D006938 ORTHO05D008600 1.5e-40 170.2 108 75.9
PSO017G4971 Papaver somniferum HOM05D006938 ORTHO05D008600 1.9e-40 169.9 105 79.0
Solyc02g021000.3 Solanum lycopersicum HOM05D006938 ORTHO05D008600 1.9e-40 169.9 105 79.0
Migut.I00065 Erythranthe guttata HOM05D006938 ORTHO05D008600 2.5e-40 169.5 104 76.9
BraA05t20549Z Brassica rapa HOM05D006938 ORTHO05D008600 3.3e-40 169.1 102 79.4
Sed0026401 Sechium edule HOM05D006938 ORTHO05D008600 3.3e-40 169.1 149 57.7
Cc07_g19080 Coffea canephora HOM05D006938 ORTHO05D008600 4.3e-40 168.7 104 76.0
Lalb_Chr03g0035761 Lupinus albus HOM05D006938 ORTHO05D008600 4.3e-40 168.7 108 75.0
Carub.0007s3179 Capsella rubella HOM05D006938 ORTHO05D008600 5.6e-40 168.3 134 63.4
Cfa008713 Carpinus fangiana HOM05D006938 ORTHO05D008600 7.2e-40 167.9 124 66.9
MELO3C015984.2 Cucumis melo HOM05D006938 ORTHO05D008600 7.2e-40 167.9 108 75.0
CsaV3_7G029440 Cucumis sativus L. HOM05D006938 ORTHO05D008600 7.2e-40 167.9 108 75.0
Ah.01g012920 Amaranthus hybridus HOM05D006938 ORTHO05D008600 9.5e-40 167.5 119 70.6
AUR62017669 Chenopodium quinoa HOM05D006938 ORTHO05D008600 1.2e-39 167.2 119 68.9
MD16G1000600 Malus domestica HOM05D006938 ORTHO05D008600 1.2e-39 167.2 107 73.8
Peaxi162Scf00363g00087 Petunia axillaris HOM05D006938 ORTHO05D008600 1.6e-39 166.8 106 75.5
ATR0618G369 Amborella trichopoda HOM05D006938 ORTHO05D008600 2.1e-39 166.4 104 77.9
AUR62015206 Chenopodium quinoa HOM05D006938 ORTHO05D008600 2.1e-39 166.4 119 68.9
Ciclev10032755m.g Citrus clementina HOM05D006938 ORTHO05D008600 3.6e-39 165.6 130 64.6
Sc20g0002200 Simmondsia chinensis HOM05D006938 ORTHO05D008600 3.6e-39 165.6 105 73.3
GSVIVG01010180001 Vitis vinifera HOM05D006938 ORTHO05D008600 3.6e-39 165.6 105 77.1
Haze_11723 Corylus avellana HOM05D006938 ORTHO05D008600 6.1e-39 164.9 125 66.4
Zm00001eb362370 Zea mays HOM05D006938 ORTHO05D008600 6.1e-39 164.9 102 76.5
Aa31LG9G17890 Aethionema arabicum HOM05D006938 ORTHO05D008600 8.0e-39 164.5 120 67.5
Nitab4.5_0000139g0080 Nicotiana tabacum HOM05D006938 ORTHO05D008600 1.4e-38 163.7 106 74.5
Nitab4.5_0002392g0050 Nicotiana tabacum HOM05D006938 ORTHO05D008600 1.4e-38 163.7 106 74.5
Hma1.2p1_0499F.1_g166850 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 2.3e-38 162.9 105 72.4
TWI53G1636 Tripterygium wilfordii HOM05D006938 ORTHO05D008600 4.0e-38 162.2 104 74.0
Os01g0966200 Oryza sativa ssp. japonica HOM05D006938 ORTHO05D008600 2.0e-37 159.8 102 74.5
RcHm_v2.0_Chr3g0449681 Rosa chinensis HOM05D006938 ORTHO05D008600 4.4e-37 158.7 102 72.5
Sc10g0007070 Simmondsia chinensis HOM05D006938 ORTHO05D008600 3.7e-36 155.6 105 70.5
Manes.07G111600 Manihot esculenta HOM05D006938 ORTHO05D008600 1.1e-35 154.1 107 72.0
CDE07G1356 Ceratophyllum demersum HOM05D002851 ORTHO05D003084 7.3e-32 141.4 85 80.0
AagrBONN_evm.TU.Sc2ySwM_344.2773 Anthoceros agrestis HOM05D006938 ORTHO05D008600 2.3e-30 136.3 107 61.7
Mapoly0101s0070 Marchantia polymorpha HOM05D006938 ORTHO05D008600 8.9e-30 134.4 106 59.4
SEGI_34816 Sequoiadendron giganteum HOM05D006938 ORTHO05D008600 8.9e-30 134.4 106 59.4
Pp3c10_19880 Physcomitrium patens HOM05D006938 ORTHO05D008600 1.5e-29 133.7 103 62.1
unitig_21.g20451 Utricularia gibba HOM05D006938 ORTHO05D008600 9.8e-29 131.0 71 87.3
MCO16G496 Micromonas commoda HOM05D006938 ORTHO05D008600 2.4e-27 126.3 115 53.9
MBI06_g34033_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 1.3e-25 120.6 80 71.2
Peaxi162Scf00818g00021 Petunia axillaris HOM05D006938 ORTHO05D008600 3.6e-23 112.5 63 85.7
CDE06G1837 Ceratophyllum demersum HOM05D006938 ORTHO05D008600 3.2e-19 99.4 56 87.5
Cre01.g052400 Chlamydomonas reinhardtii HOM05D006938 ORTHO05D008600 2.7e-18 96.3 93 49.5
PRCOL_00002779 Prasinoderma coloniale HOM05D006938 ORTHO05D008600 2.1e-15 86.7 74 55.4
EL10Ac9g22924 Beta vulgaris HOM05D006938 ORTHO05D008600 4.0e-14 82.4 44 86.4
CsaV3_4G025230 Cucumis sativus L. HOM05D006938 ORTHO05D008600 1.4e-11 73.9 62 58.1
Migut.I00066 Erythranthe guttata HOM05D006938 ORTHO05D008600 1.6e-10 70.5 44 70.5
Sc10g0007050 Simmondsia chinensis HOM05D006938 ORTHO05D008600 5.6e-08 62.0 45 57.8
AUR62028714 Chenopodium quinoa HOM05D003967 ORTHO05D004531 1.1e-06 57.8 86 32.6
AUR62008132 Chenopodium quinoa HOM05D003967 ORTHO05D004531 2.4e-06 56.6 86 31.4
MCO11G375 Micromonas commoda HOM05D003967 ORTHO05D004531 3.1e-06 56.2 113 26.5
Duzib133G1035 Durio zibethinus HOM05D003967 ORTHO05D004531 8.9e-06 54.7 116 30.2


User provided reference genes

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