Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_002500 Vanilla planifolia HOM05D006631 ORTHO05D008359 3.8e-154 548.1 277 100.0
Nn1g00373 Nelumbo nucifera HOM05D006631 ORTHO05D008359 1.9e-92 343.2 231 73.2
CsaV3_3G007830 Cucumis sativus L. HOM05D006631 ORTHO05D008359 2.7e-91 339.3 267 68.2
arahy.Tifrunner.gnm1.ann1.588I57 Arachis hypogaea HOM05D006631 ORTHO05D008359 4.6e-91 338.6 253 70.0
Hund16731 Selenicereus undatus HOM05D006631 ORTHO05D008359 6.0e-91 338.2 264 67.4
arahy.Tifrunner.gnm1.ann1.NC261Q Arachis hypogaea HOM05D006631 ORTHO05D008359 2.3e-90 336.3 252 69.8
ClCG05G000610 Citrullus lanatus HOM05D006631 ORTHO05D008359 1.5e-89 333.6 278 65.8
GSVIVG01027398001 Vitis vinifera HOM05D006631 ORTHO05D008359 1.5e-89 333.6 231 73.6
Actinidia28101 Actinidia chinensis HOM05D006631 ORTHO05D008359 1.9e-89 333.2 231 71.9
Rhsim01G0176500 Rhododendron simsii HOM05D006631 ORTHO05D008359 1.9e-89 333.2 211 78.7
Eucgr.D02642 Eucalyptus grandis HOM05D006631 ORTHO05D008359 3.3e-89 332.4 288 62.2
Cfa003762 Carpinus fangiana HOM05D006631 ORTHO05D008359 4.3e-89 332.0 281 65.5
Dinv34238 Davidia involucrata HOM05D006631 ORTHO05D008359 4.3e-89 332.0 286 64.0
Manes.05G019200 Manihot esculenta HOM05D006631 ORTHO05D008359 4.3e-89 332.0 234 73.5
Potri.014G102400 Populus trichocarpa HOM05D006631 ORTHO05D008359 4.3e-89 332.0 232 72.4
PSO063G1328 Papaver somniferum HOM05D006631 ORTHO05D008359 5.6e-89 331.6 255 69.0
Gorai.007G111000 Gossypium raimondii HOM05D006631 ORTHO05D008359 7.3e-89 331.3 235 72.3
Gohir.D11G103700 Gossypium hirsutum HOM05D006631 ORTHO05D008359 9.6e-89 330.9 235 72.3
FvH4_7g17240 Fragaria vesca HOM05D006631 ORTHO05D008359 1.3e-88 330.5 231 71.4
PSO782G2421 Papaver somniferum HOM05D006631 ORTHO05D008359 1.3e-88 330.5 255 68.6
Ca_09530_v3 Cicer arietinum L. HOM05D006631 ORTHO05D008359 3.6e-88 328.9 274 63.9
Gohir.A11G099200 Gossypium hirsutum HOM05D006631 ORTHO05D008359 3.6e-88 328.9 235 71.9
Lj1g0014889 Lotus japonicus HOM05D006631 ORTHO05D008359 3.6e-88 328.9 232 72.0
Phvul.010G116700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 3.6e-88 328.9 273 65.9
MBI04_g33414_MAGBIO Magnolia biondii HOM05D006631 ORTHO05D008359 4.8e-88 328.6 281 65.1
Haze_15698 Corylus avellana HOM05D006631 ORTHO05D008359 6.2e-88 328.2 212 77.8
FAN06G3280 Fragaria x ananassa HOM05D006631 ORTHO05D008359 8.1e-88 327.8 233 71.7
FAN06G3756 Fragaria x ananassa HOM05D006631 ORTHO05D008359 8.1e-88 327.8 233 71.7
CiPaw.01G079400 Carya illinoinensis HOM05D006631 ORTHO05D008359 1.1e-87 327.4 232 69.8
CAN.G1415.2 Capsicum annuum HOM05D006631 ORTHO05D008359 1.4e-87 327.0 211 75.8
CANSAT56G2365 Cannabis sativa HOM05D006631 ORTHO05D008359 1.8e-87 326.6 265 67.2
Glyma.19G258300 Glycine max HOM05D006631 ORTHO05D008359 2.4e-87 326.2 267 67.0
FAN03G0022 Fragaria x ananassa HOM05D006631 ORTHO05D008359 3.1e-87 325.9 211 77.3
FAN10G3243 Fragaria x ananassa HOM05D006631 ORTHO05D008359 3.1e-87 325.9 211 77.3
FAN01G0947 Fragaria x ananassa HOM05D006631 ORTHO05D008359 5.3e-87 325.1 287 62.4
Glyma.03G259400 Glycine max HOM05D006631 ORTHO05D008359 5.3e-87 325.1 265 64.5
Phvul.006G115700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 5.3e-87 325.1 233 70.0
RcHm_v2.0_Chr1g0360621 Rosa chinensis HOM05D006631 ORTHO05D008359 5.3e-87 325.1 260 65.8
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 6.9e-87 324.7 217 76.0
Psat3g001400 Pisum sativum HOM05D006631 ORTHO05D008359 9.0e-87 324.3 284 64.1
Lalb_Chr19g0133561 Lupinus albus HOM05D006631 ORTHO05D008359 1.2e-86 323.9 226 71.2
Solyc01g096240.4 Solanum lycopersicum HOM05D006631 ORTHO05D008359 1.5e-86 323.6 241 69.7
CSS0022670 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 2.0e-86 323.2 229 70.3
Sabra14G0075400 Salix brachista HOM05D006631 ORTHO05D008359 2.0e-86 323.2 212 75.5
SalBow5G1997 Salvia bowleyana HOM05D006631 ORTHO05D008359 2.0e-86 323.2 270 63.0
Thecc.01G337000 Theobroma cacao HOM05D006631 ORTHO05D008359 2.0e-86 323.2 235 71.1
Glyma.16G021600 Glycine max HOM05D006631 ORTHO05D008359 2.6e-86 322.8 272 65.1
Lalb_Chr17g0342841 Lupinus albus HOM05D006631 ORTHO05D008359 2.6e-86 322.8 269 64.7
VMungo0331G0918 Vigna mungo HOM05D006631 ORTHO05D008359 2.6e-86 322.8 212 77.4
PGR031G0416 Punica granatum HOM05D006631 ORTHO05D008359 3.4e-86 322.4 282 63.5
QL08p046273 Quercus lobata HOM05D006631 ORTHO05D008359 3.4e-86 322.4 231 71.4
AUR62004534 Chenopodium quinoa HOM05D006631 ORTHO05D008359 5.8e-86 321.6 232 70.7
Sopen01g040000 Solanum pennellii HOM05D006631 ORTHO05D008359 5.8e-86 321.6 241 69.3
AUR62022720 Chenopodium quinoa HOM05D006631 ORTHO05D008359 7.6e-86 321.2 283 62.5
Peaxi162Scf00767g00111 Petunia axillaris HOM05D006631 ORTHO05D008359 7.6e-86 321.2 211 74.4
Duzib138G0935 Durio zibethinus HOM05D006631 ORTHO05D008359 9.9e-86 320.9 235 70.6
PGSC0003DMG400000125 Solanum tuberosum HOM05D006631 ORTHO05D008359 1.3e-85 320.5 241 68.9
TAR375G0108 Trochodendron aralioides HOM05D006631 ORTHO05D008359 1.3e-85 320.5 231 71.4
Cpa.g.sc144.12 Carica papaya HOM05D006631 ORTHO05D008359 1.7e-85 320.1 261 64.4
Medtr7g117970 Medicago truncatula HOM05D006631 ORTHO05D008359 1.7e-85 320.1 226 72.1
AL5G44450 Arabidopsis lyrata HOM05D006631 ORTHO05D008359 2.2e-85 319.7 254 65.0
MSTRG.4800 Avicennia marina HOM05D006631 ORTHO05D008359 2.2e-85 319.7 233 69.1
MELO3C005999.2 Cucumis melo HOM05D006631 ORTHO05D008359 2.2e-85 319.7 296 60.8
VMungo0540G1103 Vigna mungo HOM05D006631 ORTHO05D008359 2.2e-85 319.7 211 75.4
MSTRG.28278 Avicennia marina HOM05D006631 ORTHO05D008359 2.9e-85 319.3 270 64.1
TWI59G0463 Tripterygium wilfordii HOM05D006631 ORTHO05D008359 2.9e-85 319.3 283 63.6
THA.LOC104817387 Tarenaya hassleriana HOM05D006631 ORTHO05D008359 3.8e-85 318.9 244 67.2
HanXRQChr03g0094051 Helianthus annuus HOM05D006631 ORTHO05D008359 8.4e-85 317.8 276 63.4
CDE07G1250 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 1.1e-84 317.4 205 78.0
MD01G1086200 Malus domestica HOM05D006631 ORTHO05D008359 1.4e-84 317.0 263 64.3
Prupe.2G193800 Prunus persica HOM05D006631 ORTHO05D008359 1.4e-84 317.0 264 64.4
Atru.chr5.731 Acer truncatum HOM05D006631 ORTHO05D008359 2.4e-84 316.2 271 63.8
C08p36710 Brassica napus HOM05D006631 ORTHO05D008359 4.2e-84 315.5 264 62.9
BolC8t51253H Brassica oleracea HOM05D006631 ORTHO05D008359 4.2e-84 315.5 264 62.9
AT3G61870 Arabidopsis thaliana HOM05D006631 ORTHO05D008359 7.1e-84 314.7 262 62.6
A09p53900 Brassica napus HOM05D006631 ORTHO05D008359 7.1e-84 314.7 231 68.8
BraA09t40806Z Brassica rapa HOM05D006631 ORTHO05D008359 7.1e-84 314.7 231 68.8
Lj9A602T26 Lonicera japonica HOM05D006631 ORTHO05D008359 7.1e-84 314.7 267 64.8
Aa31LG10G15890 Aethionema arabicum HOM05D006631 ORTHO05D008359 1.6e-83 313.5 248 66.1
Nitab4.5_0002527g0020 Nicotiana tabacum HOM05D006631 ORTHO05D008359 2.1e-83 313.2 291 58.8
Sc23g0001960 Simmondsia chinensis HOM05D006631 ORTHO05D008359 2.1e-83 313.2 211 74.9
TPR.G4790 Trifolium pratense HOM05D006631 ORTHO05D008359 2.1e-83 313.2 233 70.0
ECA240G4795 Erigeron canadensis HOM05D006631 ORTHO05D008359 3.5e-83 312.4 276 60.9
Os02g0122500 Oryza sativa ssp. japonica HOM05D006631 ORTHO05D008359 4.6e-83 312.0 218 71.6
Ciclev10021628m.g Citrus clementina HOM05D006631 ORTHO05D008359 7.9e-83 311.2 229 69.9
SEGI_25065 Sequoiadendron giganteum HOM05D006631 ORTHO05D008359 1.0e-82 310.8 229 69.9
Migut.N01525 Erythranthe guttata HOM05D006631 ORTHO05D008359 1.3e-82 310.5 270 61.1
Carub.0005s2861 Capsella rubella HOM05D006631 ORTHO05D008359 2.3e-82 309.7 254 63.0
COL.COLO4_06257 Corchorus olitorius HOM05D006631 ORTHO05D008359 5.1e-82 308.5 215 74.0
CARHR172210 Cardamine hirsuta HOM05D006631 ORTHO05D008359 6.6e-82 308.1 255 63.1
Lsat_1_v5_gn_3_141021 Lactuca sativa HOM05D006631 ORTHO05D008359 8.7e-82 307.8 267 62.2
Sp5g01490 Schrenkiella parvula HOM05D006631 ORTHO05D008359 8.7e-82 307.8 260 63.1
Nitab4.5_0000307g0140 Nicotiana tabacum HOM05D006631 ORTHO05D008359 1.5e-81 307.0 275 60.4
SMO143G0155 Selaginella moellendorffii HOM05D006631 ORTHO05D008359 1.9e-81 306.6 210 72.4
Sed0011774 Sechium edule HOM05D006631 ORTHO05D008359 5.6e-81 305.1 261 63.2
Thhalv10006166m.g Eutrema salsugineum HOM05D006631 ORTHO05D008359 2.8e-80 302.8 264 59.8
Mapoly0049s0137 Marchantia polymorpha HOM05D006631 ORTHO05D008359 1.8e-79 300.1 225 69.3
ATR0620G070 Amborella trichopoda HOM05D006631 ORTHO05D008359 5.3e-79 298.5 298 55.4
Ah.05g179220 Amaranthus hybridus HOM05D006631 ORTHO05D008359 6.4e-77 291.6 280 56.4
Oeu007870.1 Olea europaea HOM05D006631 ORTHO05D008359 2.7e-75 286.2 187 78.6
Pp3c5_3210 Physcomitrium patens HOM05D006631 ORTHO05D008359 7.9e-75 284.6 231 65.8
CBR_g37545 Chara braunii HOM05D006631 ORTHO05D008359 2.5e-68 263.1 209 62.7
BcaC07g42601 Brassica carinata HOM05D006631 ORTHO05D008359 1.0e-66 257.7 247 57.1
MCO07G366 Micromonas commoda HOM05D006631 ORTHO05D008359 2.1e-64 250.0 241 54.4
arahy.Tifrunner.gnm1.ann1.S1C8P4 Arachis hypogaea HOM05D006631 ORTHO05D008359 6.3e-64 248.4 175 72.0
SGA_v2.0_scaffold581G53044 Striga asiatica HOM05D006631 ORTHO05D008359 2.9e-61 239.6 162 74.7
MD07G1155100 Malus domestica HOM05D006631 ORTHO05D008359 2.1e-59 233.4 167 72.5
Cc02_g39740 Coffea canephora HOM05D006631 ORTHO05D008359 1.8e-58 230.3 215 56.3
FAN10G2512 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.3e-58 229.9 163 72.4
Cre12.g519300 Chlamydomonas reinhardtii HOM05D006631 ORTHO05D008359 3.0e-58 229.6 232 54.3
EL10Ac1g00220 Beta vulgaris HOM05D006631 ORTHO05D008359 1.5e-57 227.3 212 57.1
DCAR_008654 Daucus carota HOM05D006631 ORTHO05D008359 4.8e-56 222.2 218 57.3
arahy.Tifrunner.gnm1.ann1.GG2XE6 Arachis hypogaea HOM05D006631 ORTHO05D008359 2.4e-55 219.9 149 72.5
CDE09G1080 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 6.9e-55 218.4 232 49.1
PRCOL_00004956 Prasinoderma coloniale HOM05D006631 ORTHO05D008359 2.9e-53 213.0 234 50.4
CSS0025910 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 4.8e-48 195.7 116 80.2
AagrBONN_evm.TU.Sc2ySwM_362.2495 Anthoceros agrestis HOM05D006631 ORTHO05D008359 2.0e-46 190.3 114 79.8
unitig_8.g3405 Utricularia gibba HOM05D006631 ORTHO05D008359 4.7e-35 152.5 165 52.7
TAR374G1086 Trochodendron aralioides HOM05D000482 ORTHO05D000349 3.0e-34 149.8 201 46.3
TAR374G0170 Trochodendron aralioides HOM05D000482 ORTHO05D000349 7.0e-23 112.1 99 58.6
TAR374G1450 Trochodendron aralioides HOM05D000482 ORTHO05D000349 1.7e-21 107.5 123 49.6
unitig_22.g6820 Utricularia gibba HOM05D006631 ORTHO05D008359 8.0e-11 72.0 61 65.6
GSVIVG01001070001 Vitis vinifera HOM05D006631 ORTHO05D008359 7.8e-06 55.5 34 76.5


User provided reference genes

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