Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_002488 Vanilla planifolia HOM05D006577 ORTHO05D008428 1.5e-306 1055.4 546 100.0
Gohir.A08G149500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 8.4e-129 464.9 311 76.5
Gohir.D08G170500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 2.7e-127 459.9 320 73.8
Gorai.004G178000 Gossypium raimondii HOM05D006577 ORTHO05D008428 4.6e-127 459.1 320 73.4
Manes.17G000100 Manihot esculenta HOM05D006577 ORTHO05D008428 3.0e-126 456.4 387 64.3
COL.COLO4_11282 Corchorus olitorius HOM05D006577 ORTHO05D008428 5.1e-126 455.7 327 72.5
Thecc.03G318900 Theobroma cacao HOM05D006577 ORTHO05D008428 6.6e-126 455.3 307 74.9
Cpa.g.sc90.36 Carica papaya HOM05D006577 ORTHO05D008428 1.5e-125 454.1 306 75.2
CSS0014058 Camellia sinensis var. sinensis HOM05D006577 ORTHO05D008428 9.6e-125 451.4 328 70.7
GSVIVG01036870001 Vitis vinifera HOM05D006577 ORTHO05D008428 2.8e-124 449.9 292 77.4
Nn7g37388 Nelumbo nucifera HOM05D006577 ORTHO05D008428 6.2e-124 448.7 289 76.8
Potri.004G236300 Populus trichocarpa HOM05D006577 ORTHO05D008428 6.9e-123 445.3 321 71.0
MD08G1001400 Malus domestica HOM05D006577 ORTHO05D008428 1.2e-122 444.5 324 72.8
Oeu046783.1 Olea europaea HOM05D006577 ORTHO05D008428 1.5e-122 444.1 329 69.6
CsaV3_4G027910 Cucumis sativus L. HOM05D006577 ORTHO05D008428 2.0e-122 443.7 360 65.8
MELO3C010522.2 Cucumis melo HOM05D006577 ORTHO05D008428 5.8e-122 442.2 298 74.8
Cfa012291 Carpinus fangiana HOM05D000435 ORTHO05D000430 7.6e-122 441.8 329 70.8
CiPaw.11G075200 Carya illinoinensis HOM05D006577 ORTHO05D008428 9.9e-122 441.4 321 71.3
Actinidia32789 Actinidia chinensis HOM05D006577 ORTHO05D008428 2.9e-121 439.9 357 65.8
VMungo1215G3406 Vigna mungo HOM05D006577 ORTHO05D008428 8.4e-121 438.3 295 75.3
CDE01G0285 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 1.1e-120 438.0 340 67.6
Dinv41806 Davidia involucrata HOM05D006577 ORTHO05D008428 1.4e-120 437.6 295 74.6
Prupe.1G353400 Prunus persica HOM05D006577 ORTHO05D008428 1.4e-120 437.6 386 63.2
Eucgr.D02560 Eucalyptus grandis HOM05D006577 ORTHO05D008428 4.2e-120 436.0 291 74.9
Glyma.01G154300 Glycine max HOM05D006577 ORTHO05D008428 5.4e-120 435.6 296 74.3
CDE12G0431 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 7.1e-120 435.3 333 69.1
CANSAT35G0698 Cannabis sativa HOM05D006577 ORTHO05D008428 9.3e-120 434.9 301 74.1
TAR629G1131 Trochodendron aralioides HOM05D006577 ORTHO05D008428 9.3e-120 434.9 332 68.1
Aqoxy7G00896 Aquilegia oxysepala HOM05D006577 ORTHO05D008428 1.2e-119 434.5 322 68.9
Solyc08g075420.4 Solanum lycopersicum HOM05D006577 ORTHO05D008428 1.2e-119 434.5 289 74.4
arahy.Tifrunner.gnm1.ann1.0U4NMV Arachis hypogaea HOM05D006577 ORTHO05D008428 4.6e-119 432.6 379 62.0
arahy.Tifrunner.gnm1.ann1.Y0J304 Arachis hypogaea HOM05D006577 ORTHO05D008428 4.6e-119 432.6 379 62.0
CAN.G1026.7 Capsicum annuum HOM05D006577 ORTHO05D008428 6.0e-119 432.2 290 74.8
Nitab4.5_0007095g0010 Nicotiana tabacum HOM05D006577 ORTHO05D008428 6.0e-119 432.2 290 74.1
TWI73G0063 Tripterygium wilfordii HOM05D006577 ORTHO05D008428 1.3e-118 431.0 345 65.2
Oeu015543.2 Olea europaea HOM05D006577 ORTHO05D008428 1.8e-118 430.6 408 59.6
Lsat_1_v5_gn_6_17281 Lactuca sativa HOM05D006577 ORTHO05D008428 2.3e-118 430.3 328 68.0
SEGI_36653 Sequoiadendron giganteum HOM05D006577 ORTHO05D008428 2.3e-118 430.3 331 68.0
Peaxi162Scf00193g00730 Petunia axillaris HOM05D006577 ORTHO05D008428 3.0e-118 429.9 318 70.8
EL10Ac8g19602 Beta vulgaris HOM05D006577 ORTHO05D008428 6.7e-118 428.7 332 69.0
Sopen08g024050 Solanum pennellii HOM05D006577 ORTHO05D008428 8.7e-118 428.3 322 69.6
ECA233G0973 Erigeron canadensis HOM05D006577 ORTHO05D008428 1.5e-117 427.6 324 68.8
Glyma.11G090300 Glycine max HOM05D006577 ORTHO05D008428 1.5e-117 427.6 335 68.7
PGR042G0863 Punica granatum HOM05D006577 ORTHO05D008428 1.9e-117 427.2 293 73.0
MSTRG.1757 Avicennia marina HOM05D006577 ORTHO05D008428 2.5e-117 426.8 287 74.2
Haze_08434 Corylus avellana HOM05D006577 ORTHO05D008428 2.5e-117 426.8 342 67.5
Ciclev10011516m.g Citrus clementina HOM05D006577 ORTHO05D008428 4.3e-117 426.0 290 74.8
Phvul.002G121300 Phaseolus vulgaris HOM05D006577 ORTHO05D008428 4.3e-117 426.0 398 59.8
Cc08_g05650 Coffea canephora HOM05D006577 ORTHO05D008428 7.4e-117 425.2 314 70.7
Rhsim11G0036700 Rhododendron simsii HOM05D006577 ORTHO05D008428 1.6e-116 424.1 294 73.1
Atru.chr8.2629 Acer truncatum HOM05D006577 ORTHO05D008428 2.1e-116 423.7 323 67.8
DCAR_030906 Daucus carota HOM05D006577 ORTHO05D008428 2.8e-116 423.3 324 66.7
HanXRQChr07g0198411 Helianthus annuus HOM05D006577 ORTHO05D008428 2.8e-116 423.3 287 76.0
ClCG11G016060 Citrullus lanatus HOM05D006577 ORTHO05D008428 3.7e-116 422.9 319 69.3
vmacro00091 Vaccinium macrocarpon HOM05D006577 ORTHO05D008428 6.2e-116 422.2 329 68.1
Psat1g131640 Pisum sativum HOM05D006577 ORTHO05D008428 1.1e-115 421.4 292 74.0
AUR62030109 Chenopodium quinoa HOM05D006577 ORTHO05D008428 1.8e-115 420.6 337 65.9
Migut.E01373 Erythranthe guttata HOM05D006577 ORTHO05D008428 1.8e-115 420.6 286 74.8
ATR0568G043 Amborella trichopoda HOM05D006577 ORTHO05D008428 6.9e-115 418.7 311 71.1
Lalb_Chr16g0380351 Lupinus albus HOM05D006577 ORTHO05D008428 9.0e-115 418.3 368 62.0
Lj2g0006155 Lotus japonicus HOM05D006577 ORTHO05D008428 2.6e-114 416.8 326 67.8
TPR.G29075 Trifolium pratense HOM05D006577 ORTHO05D008428 5.8e-114 415.6 321 69.2
AT4G19190 Arabidopsis thaliana HOM05D006577 ORTHO05D008428 1.1e-112 411.4 291 70.8
PSO502G0007 Papaver somniferum HOM05D006577 ORTHO05D008428 2.4e-112 410.2 284 71.8
Aa31LG6G1900 Aethionema arabicum HOM05D006577 ORTHO05D008428 3.2e-112 409.8 290 70.7
FvH4_2g37380 Fragaria vesca HOM05D006577 ORTHO05D008428 5.5e-112 409.1 389 60.7
Medtr2g040410 Medicago truncatula HOM05D006577 ORTHO05D008428 7.1e-112 408.7 383 60.3
A01p11160 Brassica napus HOM05D006577 ORTHO05D008428 9.3e-112 408.3 293 71.3
BraA01t01062Z Brassica rapa HOM05D006577 ORTHO05D008428 9.3e-112 408.3 293 71.3
AL7G34890 Arabidopsis lyrata HOM05D006577 ORTHO05D008428 1.2e-111 407.9 292 70.9
unitig_37.g12910 Utricularia gibba HOM05D006577 ORTHO05D008428 1.6e-111 407.5 302 68.9
C01p13200 Brassica napus HOM05D006577 ORTHO05D008428 2.1e-111 407.1 293 71.0
BolC1t01294H Brassica oleracea HOM05D006577 ORTHO05D008428 2.1e-111 407.1 293 71.0
Ca_13135_v3 Cicer arietinum L. HOM05D006577 ORTHO05D008428 2.7e-111 406.8 370 61.6
FAN21G2299 Fragaria x ananassa HOM05D006577 ORTHO05D008428 1.3e-110 404.4 322 68.9
Carub.0007s2195 Capsella rubella HOM05D006577 ORTHO05D008428 1.8e-110 404.1 292 69.9
PSO675G5955 Papaver somniferum HOM05D006577 ORTHO05D008428 1.8e-110 404.1 284 71.1
RcHm_v2.0_Chr6g0304321 Rosa chinensis HOM05D006577 ORTHO05D008428 1.8e-110 404.1 378 61.6
Sp7g17900 Schrenkiella parvula HOM05D006577 ORTHO05D008428 1.8e-110 404.1 294 70.1
Thhalv10024821m.g Eutrema salsugineum HOM05D006577 ORTHO05D008428 8.7e-110 401.7 288 70.5
CARHR226070 Cardamine hirsuta HOM05D006577 ORTHO05D008428 1.1e-109 401.4 298 69.5
Sabra01G0180600 Salix brachista HOM05D006577 ORTHO05D008428 2.8e-108 396.7 354 61.3
FAN20G0322 Fragaria x ananassa HOM05D006577 ORTHO05D008428 5.5e-104 382.5 402 59.0
FAN27G1697 Fragaria x ananassa HOM05D006577 ORTHO05D008428 1.2e-103 381.3 422 54.7
BcaC09g51429 Brassica carinata HOM05D006577 ORTHO05D008428 1.6e-103 380.9 294 68.0
Mapoly0190s0006 Marchantia polymorpha HOM05D006577 ORTHO05D008428 1.0e-102 378.3 301 65.1
THA.LOC104806196 Tarenaya hassleriana HOM05D006577 ORTHO05D008428 1.8e-102 377.5 294 68.0
SMO172G0042 Selaginella moellendorffii HOM05D006577 ORTHO05D008428 2.9e-97 360.1 457 49.0
Pp3c3_31660 Physcomitrium patens HOM05D006577 ORTHO05D008428 1.9e-96 357.5 281 65.8
QL12p004173 Quercus lobata HOM05D006577 ORTHO05D008428 1.4e-91 341.3 614 39.3
Lj3A8G25 Lonicera japonica HOM05D006577 ORTHO05D008428 9.1e-91 338.6 231 72.7
BcaC09g51430 Brassica carinata HOM05D006577 ORTHO05D008428 1.5e-90 337.8 241 71.8
Zm00001eb227500 Zea mays HOM05D006577 ORTHO05D008428 2.0e-90 337.4 263 68.8
SGA_v2.0_scaffold144G35886 Striga asiatica HOM05D006577 ORTHO05D008428 2.5e-88 330.5 257 67.7
Sc24g0001520 Simmondsia chinensis HOM05D006577 ORTHO05D008428 2.2e-84 317.4 260 65.8
CBR_g50314 Chara braunii HOM05D006577 ORTHO05D008428 4.8e-84 316.2 287 56.1
Sed0006082 Sechium edule HOM05D006577 ORTHO05D008428 3.9e-78 296.6 325 53.8
Lj3A28G25 Lonicera japonica HOM05D006577 ORTHO05D008428 2.5e-64 250.8 190 68.4
Ah.09g232390 Amaranthus hybridus HOM05D006577 ORTHO05D008428 2.3e-57 227.6 287 47.4
Hund17694 Selenicereus undatus HOM05D006577 ORTHO05D008428 7.2e-56 222.6 164 71.3
Hund17692 Selenicereus undatus HOM05D006577 ORTHO05D008428 2.3e-54 217.6 195 58.5
HanXRQChr07g0198421 Helianthus annuus HOM05D006577 ORTHO05D008428 8.0e-47 192.6 177 60.5
Lj9P453T24 Lonicera japonica HOM05D006577 ORTHO05D008428 5.2e-46 189.9 153 61.4
MCO15G109 Micromonas commoda HOM05D006577 ORTHO05D008428 1.1e-38 165.6 327 34.9
Os06g0708900 Oryza sativa ssp. japonica HOM05D006577 ORTHO05D008428 1.3e-28 132.1 81 80.2
Zm00001eb395460 Zea mays HOM05D006577 ORTHO05D008428 2.9e-28 131.0 105 66.7
Zm00001eb339160 Zea mays HOM05D006577 ORTHO05D008428 1.9e-27 128.3 81 79.0
CARHR123800 Cardamine hirsuta HOM05D006577 ORTHO05D008428 5.1e-25 120.2 69 78.3
VMungo0251G3731 Vigna mungo HOM05D006577 ORTHO05D008428 2.8e-23 114.4 79 73.4
MD15G1000700 Malus domestica HOM05D006577 ORTHO05D008428 5.8e-21 106.7 115 58.3
TPR.G30154 Trifolium pratense HOM05D006577 ORTHO05D008428 2.4e-19 101.3 169 45.6
Nitab4.5_0000030g0480 Nicotiana tabacum HOM05D006577 ORTHO05D008428 4.6e-18 97.1 57 73.7
FAN21G2282 Fragaria x ananassa HOM05D006577 ORTHO05D011051 2.4e-14 84.7 159 38.4
TPR.G13376 Trifolium pratense HOM05D006577 ORTHO05D008428 2.4e-14 84.7 67 67.2
FAN21G2462 Fragaria x ananassa HOM05D006577 ORTHO05D011051 4.0e-14 84.0 159 38.4
AUR62042461 Chenopodium quinoa HOM05D006577 ORTHO05D008428 1.3e-12 79.0 238 31.9
Cre06.g280700 Chlamydomonas reinhardtii HOM05D006577 ORTHO05D008428 1.3e-12 79.0 102 40.2
Lj3A8T28 Lonicera japonica HOM05D006577 ORTHO05D008428 1.3e-12 79.0 50 72.0
Lj3C28T3 Lonicera japonica HOM05D006577 ORTHO05D008428 1.3e-12 79.0 50 72.0
FvH4_3g03932 Fragaria vesca HOM05D006577 ORTHO05D008428 2.2e-12 78.2 42 85.7
BcaB08g35318 Brassica carinata HOM05D006577 ORTHO05D008428 1.9e-11 75.1 44 75.0
FAN21G2626 Fragaria x ananassa HOM05D006577 ORTHO05D011051 3.2e-11 74.3 159 37.1


User provided reference genes

Program Settings