Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_002369 Vanilla planifolia HOM05D005195 ORTHO05D006088 7.3e-200 700.3 335 100.0
HPP92_027596 Vanilla planifolia HOM05D005195 ORTHO05D006088 4.4e-181 637.9 319 96.2
MBI19_g32876_MAGBIO Magnolia biondii HOM05D005195 ORTHO05D006088 3.0e-97 359.4 334 55.4
Atru.chr7.1799 Acer truncatum HOM05D005195 ORTHO05D006088 1.3e-95 354.0 271 64.9
ATR0099G089 Amborella trichopoda HOM05D005195 ORTHO05D006088 2.4e-94 349.7 229 71.6
HPP92_019108 Vanilla planifolia HOM05D005195 ORTHO05D006088 2.4e-94 349.7 319 56.7
Aqoxy7G00925 Aquilegia oxysepala HOM05D005195 ORTHO05D006088 1.6e-93 347.1 283 60.8
TAR383G0985 Trochodendron aralioides HOM05D005195 ORTHO05D006088 1.6e-93 347.1 322 56.8
CiPaw.03G199200 Carya illinoinensis HOM05D005195 ORTHO05D006088 4.5e-93 345.5 217 73.7
Gorai.010G094600 Gossypium raimondii HOM05D005195 ORTHO05D006088 4.5e-93 345.5 279 63.1
Gohir.D06G081300 Gossypium hirsutum HOM05D005195 ORTHO05D006088 5.9e-93 345.1 279 62.7
Gohir.A06G082100 Gossypium hirsutum HOM05D005195 ORTHO05D006088 1.0e-92 344.4 272 63.2
GSVIVG01014997001 Vitis vinifera HOM05D005195 ORTHO05D006088 1.0e-92 344.4 273 63.4
Nn6g35744 Nelumbo nucifera HOM05D005195 ORTHO05D006088 1.7e-92 343.6 213 75.1
Dinv25492 Davidia involucrata HOM05D005195 ORTHO05D006088 3.8e-92 342.4 261 64.8
Duzib187G0988 Durio zibethinus HOM05D005195 ORTHO05D006088 3.8e-92 342.4 284 59.5
Duzib150G0538 Durio zibethinus HOM05D005195 ORTHO05D006088 5.0e-92 342.0 273 60.8
Thecc.09G067900 Theobroma cacao HOM05D005195 ORTHO05D006088 1.9e-91 340.1 274 61.3
PGR142G1085 Punica granatum HOM05D005195 ORTHO05D006088 4.3e-91 339.0 223 71.3
VMungo1309G1826 Vigna mungo HOM05D005195 ORTHO05D006088 5.6e-91 338.6 210 74.8
Ciclev10008817m.g Citrus clementina HOM05D005195 ORTHO05D006088 7.3e-91 338.2 278 61.5
PSO421G0417 Papaver somniferum HOM05D005195 ORTHO05D006088 9.5e-91 337.8 206 75.2
Phvul.009G221900 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 9.5e-91 337.8 210 74.8
Os06g0192900 Oryza sativa ssp. japonica HOM05D005195 ORTHO05D006088 1.2e-90 337.4 317 57.1
Prupe.7G189700 Prunus persica HOM05D005195 ORTHO05D006088 2.1e-90 336.7 263 62.4
MELO3C015557.2 Cucumis melo HOM05D005195 ORTHO05D006088 2.8e-90 336.3 275 60.0
Eucgr.C00758 Eucalyptus grandis HOM05D005195 ORTHO05D006088 2.8e-90 336.3 233 67.4
Glyma.09G077400 Glycine max HOM05D005195 ORTHO05D006088 3.6e-90 335.9 216 74.1
CsaV3_1G041450 Cucumis sativus L. HOM05D005195 ORTHO05D006088 4.7e-90 335.5 264 61.4
Manes.16G088800 Manihot esculenta HOM05D005195 ORTHO05D006088 4.7e-90 335.5 220 71.4
BcaNung02154 Brassica carinata HOM05D005195 ORTHO05D006088 6.1e-90 335.1 219 70.8
C07p59500 Brassica napus HOM05D005195 ORTHO05D006088 6.1e-90 335.1 219 70.8
Lj6g0001650 Lotus japonicus HOM05D005195 ORTHO05D006088 1.0e-89 334.3 242 66.5
BcaC09g52118 Brassica carinata HOM05D005195 ORTHO05D006088 1.4e-89 334.0 301 57.5
Sabra06G0166900 Salix brachista HOM05D005195 ORTHO05D006088 1.4e-89 334.0 233 68.7
QL11p003443 Quercus lobata HOM05D005195 ORTHO05D006088 1.8e-89 333.6 211 72.5
Actinidia39605 Actinidia chinensis HOM05D005195 ORTHO05D006088 2.3e-89 333.2 213 71.8
EL10Ac8g18946 Beta vulgaris HOM05D005195 ORTHO05D006088 2.3e-89 333.2 201 76.1
BolC7t46394H Brassica oleracea HOM05D005195 ORTHO05D006088 2.3e-89 333.2 219 70.3
CDE06G1243 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 2.3e-89 333.2 310 54.2
MSTRG.26504 Avicennia marina HOM05D005195 ORTHO05D006088 6.8e-89 331.6 213 71.8
Cfa002928 Carpinus fangiana HOM05D005195 ORTHO05D006088 6.8e-89 331.6 312 56.1
ClCG03G014710 Citrullus lanatus HOM05D005195 ORTHO05D006088 6.8e-89 331.6 230 68.3
Lj4g0025754 Lotus japonicus HOM05D005195 ORTHO05D006088 8.9e-89 331.3 211 73.9
Lalb_Chr07g0181481 Lupinus albus HOM05D005195 ORTHO05D006088 8.9e-89 331.3 210 73.8
MD15G1225300 Malus domestica HOM05D005195 ORTHO05D006088 1.5e-88 330.5 309 56.3
Sed0003985 Sechium edule HOM05D005195 ORTHO05D006088 1.5e-88 330.5 237 65.8
CANSAT56G1537 Cannabis sativa HOM05D005195 ORTHO05D006088 2.0e-88 330.1 310 55.5
Lj7A694G45 Lonicera japonica HOM05D005195 ORTHO05D006088 2.6e-88 329.7 210 74.8
Haze_26081 Corylus avellana HOM05D005195 ORTHO05D006088 4.4e-88 328.9 206 74.3
FAN19G0176 Fragaria x ananassa HOM05D005195 ORTHO05D006088 4.4e-88 328.9 268 61.6
Potri.006G216500 Populus trichocarpa HOM05D005195 ORTHO05D006088 5.7e-88 328.6 233 67.4
TWI63G0336 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 5.7e-88 328.6 274 60.2
Cc00_g13790 Coffea canephora HOM05D005195 ORTHO05D006088 7.5e-88 328.2 218 68.8
Lalb_Chr13g0299131 Lupinus albus HOM05D005195 ORTHO05D006088 7.5e-88 328.2 237 67.1
Phvul.003G126200 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 7.5e-88 328.2 221 70.6
Zm00001eb374160 Zea mays HOM05D005195 ORTHO05D006088 7.5e-88 328.2 282 60.3
FvH4_1g09650 Fragaria vesca HOM05D005195 ORTHO05D006088 9.8e-88 327.8 268 61.6
Glyma.17G044200 Glycine max HOM05D005195 ORTHO05D006088 9.8e-88 327.8 221 70.6
Nitab4.5_0000055g0120 Nicotiana tabacum HOM05D005195 ORTHO05D006088 9.8e-88 327.8 318 53.5
FAN26G2084 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.3e-87 327.4 268 61.6
Duzib168G1130 Durio zibethinus HOM05D005195 ORTHO05D006088 2.9e-87 326.2 213 70.4
FAN26G0153 Fragaria x ananassa HOM05D005195 ORTHO05D006088 2.9e-87 326.2 268 61.6
Gorai.001G018400 Gossypium raimondii HOM05D005195 ORTHO05D006088 2.9e-87 326.2 271 58.7
CAN.G88.12 Capsicum annuum HOM05D005195 ORTHO05D006088 3.7e-87 325.9 213 70.0
TWI34G1666 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 3.7e-87 325.9 271 59.4
VMungo1215G2768 Vigna mungo HOM05D005195 ORTHO05D006088 4.9e-87 325.5 221 69.2
CSS0045452 Camellia sinensis var. sinensis HOM05D005195 ORTHO05D006088 6.4e-87 325.1 211 71.6
Thhalv10025620m.g Eutrema salsugineum HOM05D005195 ORTHO05D006088 8.3e-87 324.7 305 56.4
Glyma.13G115600 Glycine max HOM05D005195 ORTHO05D006088 8.3e-87 324.7 223 69.5
Oeu010852.1 Olea europaea HOM05D005195 ORTHO05D006088 8.3e-87 324.7 211 71.1
Oeu010853.1 Olea europaea HOM05D005195 ORTHO05D006088 8.3e-87 324.7 211 71.1
Hund08917 Selenicereus undatus HOM05D005195 ORTHO05D006088 8.3e-87 324.7 199 75.4
TPR.G12689 Trifolium pratense HOM05D005195 ORTHO05D006088 8.3e-87 324.7 221 69.2
C01p05540 Brassica napus HOM05D005195 ORTHO05D006088 1.1e-86 324.3 231 67.1
BolC1t00534H Brassica oleracea HOM05D005195 ORTHO05D006088 1.1e-86 324.3 231 67.1
RcHm_v2.0_Chr2g0096491 Rosa chinensis HOM05D005195 ORTHO05D006088 1.1e-86 324.3 199 75.4
Cpa.g.sc82.43 Carica papaya HOM05D005195 ORTHO05D006088 1.4e-86 323.9 230 66.1
CDE07G0654 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 1.4e-86 323.9 310 53.2
Nitab4.5_0001114g0020 Nicotiana tabacum HOM05D005195 ORTHO05D006088 1.4e-86 323.9 326 51.5
A03p61820 Brassica napus HOM05D005195 ORTHO05D006088 2.4e-86 323.2 271 60.1
BraA03t15220Z Brassica rapa HOM05D005195 ORTHO05D006088 2.4e-86 323.2 271 60.1
AL7G18430 Arabidopsis lyrata HOM05D005195 ORTHO05D006088 3.2e-86 322.8 249 63.1
Carub.0007s0732 Capsella rubella HOM05D005195 ORTHO05D006088 3.2e-86 322.8 295 55.3
PSO104G0051 Papaver somniferum HOM05D005195 ORTHO05D006088 3.2e-86 322.8 218 70.2
Psat1g139120 Pisum sativum HOM05D005195 ORTHO05D006088 3.2e-86 322.8 210 72.4
SalBow6G3026 Salvia bowleyana HOM05D005195 ORTHO05D006088 3.2e-86 322.8 334 52.1
Ca_21349_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 5.4e-86 322.0 221 69.2
Gohir.A07G017900 Gossypium hirsutum HOM05D005195 ORTHO05D006088 5.4e-86 322.0 272 58.5
arahy.Tifrunner.gnm1.ann1.EYB30S Arachis hypogaea HOM05D005195 ORTHO05D006088 9.2e-86 321.2 198 75.3
AT4G33140 Arabidopsis thaliana HOM05D005195 ORTHO05D006088 1.2e-85 320.9 209 69.9
Lalb_Chr12g0200391 Lupinus albus HOM05D005195 ORTHO05D006088 1.2e-85 320.9 271 58.3
Sopen07g006530 Solanum pennellii HOM05D005195 ORTHO05D006088 1.2e-85 320.9 213 68.5
BraA01t00489Z Brassica rapa HOM05D005195 ORTHO05D006088 1.6e-85 320.5 210 71.0
Aa31sc810G10 Aethionema arabicum HOM05D005195 ORTHO05D006088 2.0e-85 320.1 210 69.5
Psat4g019920 Pisum sativum HOM05D005195 ORTHO05D006088 2.0e-85 320.1 221 68.8
Sp7g30880 Schrenkiella parvula HOM05D005195 ORTHO05D006088 2.0e-85 320.1 209 70.3
Gohir.D07G017700 Gossypium hirsutum HOM05D005195 ORTHO05D006088 2.7e-85 319.7 271 57.9
THA.LOC104804446 Tarenaya hassleriana HOM05D005195 ORTHO05D006088 4.6e-85 318.9 252 61.9
Medtr2g044900 Medicago truncatula HOM05D005195 ORTHO05D006088 5.9e-85 318.5 210 71.0
A01p05070 Brassica napus HOM05D005195 ORTHO05D006088 1.0e-84 317.8 210 70.5
Medtr4g124450 Medicago truncatula HOM05D005195 ORTHO05D006088 1.0e-84 317.8 213 69.0
MD02G1105400 Malus domestica HOM05D005195 ORTHO05D006088 1.3e-84 317.4 321 53.3
AUR62025326 Chenopodium quinoa HOM05D005195 ORTHO05D006088 5.0e-84 315.5 188 76.6
AUR62028337 Chenopodium quinoa HOM05D005195 ORTHO05D006088 6.6e-84 315.1 190 75.3
Migut.J00869 Erythranthe guttata HOM05D005195 ORTHO05D006088 4.3e-83 312.4 209 68.4
arahy.Tifrunner.gnm1.ann1.QID06X Arachis hypogaea HOM05D005195 ORTHO05D006088 5.6e-83 312.0 198 73.7
CDE05G1368 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 5.6e-83 312.0 198 71.7
FAN23G0045 Fragaria x ananassa HOM05D005195 ORTHO05D006088 5.6e-83 312.0 294 54.8
TPR.G25386 Trifolium pratense HOM05D005195 ORTHO05D006088 1.6e-82 310.5 198 73.7
Actinidia33513 Actinidia chinensis HOM05D000417 ORTHO05D006088 2.8e-82 309.7 220 67.3
MSTRG.19420 Avicennia marina HOM05D005195 ORTHO05D006088 2.3e-81 306.6 204 70.6
Sc14g0000920 Simmondsia chinensis HOM05D005195 ORTHO05D006088 4.0e-81 305.8 188 73.9
unitig_578.g15872 Utricularia gibba HOM05D005195 ORTHO05D006088 5.2e-81 305.4 214 66.4
Rhsim05G0001200 Rhododendron simsii HOM05D005195 ORTHO05D006088 5.8e-80 302.0 336 50.0
SHI27969 Sapria himalayana HOM05D005195 ORTHO05D006088 7.8e-77 291.6 230 60.4
SEGI_21946 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 4.3e-75 285.8 203 62.1
Mapoly0181s0009 Marchantia polymorpha HOM05D005195 ORTHO05D006088 3.1e-73 279.6 207 59.4
Oeu055315.1 Olea europaea HOM05D005195 ORTHO05D006088 8.9e-73 278.1 292 52.4
Pp3c5_26930 Physcomitrium patens HOM05D005195 ORTHO05D006088 1.6e-69 267.3 195 63.1
CARHR241160 Cardamine hirsuta HOM05D005195 ORTHO05D006088 1.1e-65 254.6 161 69.6
vmacro06379 Vaccinium macrocarpon HOM05D005195 ORTHO05D006088 2.2e-63 246.9 235 54.9
Migut.L00513 Erythranthe guttata HOM05D005195 ORTHO05D006088 4.9e-63 245.7 159 69.2
Dinv42438 Davidia involucrata HOM05D005195 ORTHO05D006088 7.1e-62 241.9 175 67.4
Ca_02313_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 9.2e-62 241.5 156 70.5
Cre16.g661550 Chlamydomonas reinhardtii HOM05D005195 ORTHO05D006088 3.3e-59 233.0 208 55.3
Solyc07g017700.3 Solanum lycopersicum HOM05D005195 ORTHO05D006088 4.7e-58 229.2 148 68.2
DCAR_024788 Daucus carota HOM05D005195 ORTHO05D006088 2.4e-57 226.9 136 76.5
Glyma.17G255700 Glycine max HOM05D005195 ORTHO05D006088 6.4e-55 218.8 138 72.5
Peaxi162Scf00452g00117 Petunia axillaris HOM05D005195 ORTHO05D006088 2.4e-49 200.3 119 73.1
EL10Ac7g16303 Beta vulgaris HOM05D005195 ORTHO05D006088 6.7e-44 182.2 148 62.2
PRCOL_00003934 Prasinoderma coloniale HOM05D005195 ORTHO05D006088 9.0e-41 171.8 169 47.3
RcHm_v2.0_Chr2g0117071 Rosa chinensis HOM05D005195 ORTHO05D006088 2.2e-39 167.2 153 52.9
Pp3c6_3390 Physcomitrium patens HOM05D005195 ORTHO05D006088 4.5e-32 142.9 111 58.6
SEGI_31296 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 4.2e-22 109.8 83 56.6
SGA_v2.0_scaffold31G12703 Striga asiatica HOM05D005195 ORTHO05D006088 3.7e-18 96.7 116 46.6
Solyc07g017710.1 Solanum lycopersicum HOM05D005195 ORTHO05D006088 6.9e-17 92.4 75 62.7
PGSC0003DMG400002304 Solanum tuberosum HOM05D005195 ORTHO05D006088 3.2e-14 83.6 57 68.4
COL.COLO4_21182 Corchorus olitorius HOM05D005195 ORTHO05D006088 1.6e-13 81.3 141 36.9
Peaxi162Scf00452g00122 Petunia axillaris HOM05D005195 ORTHO05D006088 2.7e-13 80.5 44 84.1
Ca_29779_v3 Cicer arietinum L. HOM05D000417 ORTHO05D000342 4.7e-13 79.7 71 59.2
Migut.L01605 Erythranthe guttata HOM05D005195 ORTHO05D006088 4.7e-13 79.7 125 40.0
Zm00001eb045610 Zea mays HOM05D005195 ORTHO05D006088 1.5e-11 74.7 64 64.1
Zm00001eb382840 Zea mays HOM05D003596 ORTHO05D004256 3.2e-06 57.0 54 53.7


User provided reference genes

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